CX307864

Overview
NameCX307864
Unique NameCX307864
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length538
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX307864 vs. ExPASy Swiss-Prot
Match: EXOC2_ARATH (Exocyst complex component 2 OS=Arabidopsis thaliana GN=SEC5A PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 2.326e-61
Identity = 116/179 (64.80%), Postives = 150/179 (83.80%), Query Frame = 2 
Query:    2 SLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVR 538
            +LMI S++SEA KSEDM+AQ+ EI  SVRL+FLN FLDFA HLE I ++L+Q+ S +++   +NGYS +   E  ++  GSV+DPH+RLL+V+SNIGYCKDEL+SELYNK+K  WLQSR+K+++ +D+QDL+MSFSGL EKVLE YTFAKANLIRTAAT +LLDSG+QWG+AP VKG+R
Sbjct:  706 NLMILSVKSEAAKSEDMFAQIEEIIISVRLAFLNCFLDFAAHLEQIGADLSQSTSRQDNW--KNGYSDEHQEEPSANTYGSVIDPHRRLLMVLSNIGYCKDELASELYNKFKYTWLQSRDKNEDSSDLQDLIMSFSGLGEKVLEHYTFAKANLIRTAATNYLLDSGIQWGSAPQVKGIR 882
The following BLAST results are available for this feature:
BLAST of CX307864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
EXOC2_ARATH2.326e-6164.80Exocyst complex component 2 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionC20002H08SK OF2 Citrus clementina cDNA clone C20002H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307864 ID=CX307864; Name=CX307864; organism=Citrus clementina; type=EST; length=538bp
TAGTTTGATGATTCACTCTTTAAGGAGTGAGGCTACAAAGTCAGAAGATA
TGTATGCACAGCTTCTGGAAATTCAAGAATCTGTTAGACTCTCATTTTTG
AACCGTTTCCTGGATTTTGCTGGTCATTTAGAGCATATTGCAAGTGAGCT
TGCCCAAAACAAATCAAACAAAGAAAGTCAACATTTACAAAATGGATATT
CTTCTGATCCATGCACAGAATCATTGTCTGATATCCCTGGAAGTGTTGTT
GATCCACACCAAAGACTGTTGATTGTAATAAGCAATATTGGGTATTGCAA
AGATGAGCTTTCTTCTGAGCTATATAACAAATATAAAGATATCTGGCTTC
AATCTAGGGAAAAAGATCAGGAGGGCACTGATATACAAGATCTAGTGATG
TCTTTTTCTGGACTTGAAGAGAAGGTCCTTGAGCAGTACACATTTGCAAA
GGCAAACTTGATAAGAACAGCAGCCACTACATTTTTGTTGGATTCTGGTG
TTCAATGGGGAGCGGCACCGGCAGTCAAAGGTGTGCGT
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