CX307866

Overview
NameCX307866
Unique NameCX307866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length540
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC2_HUMAN (Probable E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.339e-15
Identity = 43/138 (31.16%), Postives = 83/138 (60.14%), Query Frame = 1
Query:  115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX--TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 522
            G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L                T+ +++ GQV+++G   +G+   G  G+    +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE
Sbjct:  559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694          

HSP 2 Score: 70.4774 bits (171), Expect = 5.893e-12
Identity = 41/145 (28.28%), Postives = 75/145 (51.72%), Query Frame = 1
Query:  112 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX--TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 540
            AG  HS  VT+ G +Y++G    G+LGH  +E++ +P+ + +L                T+ ++D   V+++G   +G+   G  G+     P  ++SL  + VV+   G+ F+  L++ G VYT+  G+  RLGH ++ +   P
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4240          
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC2_MOUSE (Probable E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 4.360e-15
Identity = 42/138 (30.43%), Postives = 83/138 (60.14%), Query Frame = 1
Query:  115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX--TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 522
            G  +S A+T++G +Y++G  + G+LGHG++E+E  P  +  L                T+ +++ GQV+++G   +G+   G  G+    +P+L+E L+++ V++   G+ F+  L+++G+VY++  G++ RLGH TE
Sbjct:  560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695          

HSP 2 Score: 70.4774 bits (171), Expect = 5.893e-12
Identity = 41/145 (28.28%), Postives = 75/145 (51.72%), Query Frame = 1
Query:  112 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX--TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 540
            AG  HS  VT+ G +Y++G    G+LGH  +E++ +P+ + +L                T+ ++D   V+++G   +G+   G  G+     P  ++SL  + VV+   G+ F+  L++ G VYT+  G+  RLGH ++ +   P
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4242          

HSP 3 Score: 67.3958 bits (163), Expect = 4.989e-11
Identity = 42/144 (29.17%), Postives = 72/144 (50.00%), Query Frame = 1
Query:  115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--XXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 540
            G  HS  +TS G +Y++G    G+LGHG    + +P+ ++ L                T+ ++D G V+++G   FG+   G  G++    PQ +E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P
Sbjct: 3108 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKP 3249          
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC2_DROME (Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 3.125e-13
Identity = 45/136 (33.09%), Postives = 72/136 (52.94%), Query Frame = 1
Query:  115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX--TMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 513
            G  HS A+T+ G V ++G    G+LGHG +E++ RP+ + +L                T+ I+D   V+++G   +G+    G  G KL   P  +ESL  + VV+   G+ F+  L++ G VYT+  G+  RLGH
Sbjct: 4196 GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKL---PYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4328          

HSP 2 Score: 72.0182 bits (175), Expect = 2.025e-12
Identity = 44/148 (29.73%), Postives = 75/148 (50.68%), Query Frame = 1
Query:   76 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--XXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 513
            EA   ++      G  HS A++S+G +Y++G    G+LGHG    + +P+ + +L                T+ +++ G V+++G   FG+   G  G++   +P  +E L  I VVQ   G  F+  L+R G V+T+  G+  RLGH
Sbjct: 3120 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG--GSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3265          
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: RCC2_DANRE (Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.330e-13
Identity = 43/143 (30.07%), Postives = 75/143 (52.45%), Query Frame = 1
Query:  100 SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 522
            S  ++GP   HS+ +T++G ++S+G N  GQLGHG T+    P+ I  L              T+ +++ G VY FG++  G+   G Q T  V SP  ++      +V+ A G  F+ ++  +G +Y+F      +LGH+++
Sbjct:  124 SCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQ-TDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSD 264          
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC4_MOUSE (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 5.330e-13
Identity = 52/153 (33.99%), Postives = 83/153 (54.25%), Query Frame = 1
Query:   94 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEP 540
            +N  A+A G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL              ++ +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E +   P
Sbjct:   84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVP 233          

HSP 2 Score: 69.3218 bits (168), Expect = 1.313e-11
Identity = 43/129 (33.33%), Postives = 69/129 (53.49%), Query Frame = 1
Query:  115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 498
            G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L              T+ ++D GQVYA+G DS G  + G+QG+ + +  P+ ++SL +I +VQ A G + +  LS+   V  F WG +
Sbjct:   42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG--QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQN 164          
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC4_HUMAN (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.330e-13
Identity = 41/147 (27.89%), Postives = 79/147 (53.74%), Query Frame = 1
Query:  103 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 540
            Q   G  HS+A++    V+ +G N  GQLG GT  +++  P+ ++SL              + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P
Sbjct:  141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285          

HSP 2 Score: 70.8626 bits (172), Expect = 4.512e-12
Identity = 49/145 (33.79%), Postives = 77/145 (53.10%), Query Frame = 1
Query:  115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEP 540
            G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL              ++ +S A +V+ +G++ +G+   G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E +   P
Sbjct:   92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD-CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVP 233          

HSP 3 Score: 67.0106 bits (162), Expect = 6.516e-11
Identity = 42/137 (30.66%), Postives = 71/137 (51.82%), Query Frame = 1
Query:  115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 522
            G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L              T+ ++D GQVYA+G DS G  + G+ G+ + +  P+ ++SL +I +VQ A G + +  LS+   V+ +      +LG  T+
Sbjct:   42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG--QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174          
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC4_RAT (Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.961e-13
Identity = 49/145 (33.79%), Postives = 79/145 (54.48%), Query Frame = 1
Query:  115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEP 540
            G  H++A+  KG VY++G +S GQLG   +EE  R PR I+SL              ++ +S A +V+ +G++ +G+   G++  K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E +   P
Sbjct:   92 GEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVP 233          

HSP 2 Score: 72.7886 bits (177), Expect = 1.187e-12
Identity = 41/147 (27.89%), Postives = 78/147 (53.06%), Query Frame = 1
Query:  103 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 540
            Q   G  HS+A++    V+ +G N  GQLG G   +++  P+ I+SL              + +++ +G ++ +G++ FG+     +  + V  P L++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P
Sbjct:  141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285          

HSP 3 Score: 69.3218 bits (168), Expect = 1.313e-11
Identity = 43/129 (33.33%), Postives = 69/129 (53.49%), Query Frame = 1
Query:  115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 498
            G  H++ V   G VY+ G N  GQLGH  + +  +P  + +L              T+ ++D GQVYA+G DS G  + G+QG+ + +  P+ ++SL +I +VQ A G + +  LS+   V  F WG +
Sbjct:   42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG--QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQN 164          
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: RCC2_MOUSE (Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.187e-12
Identity = 41/133 (30.83%), Postives = 70/133 (52.63%), Query Frame = 1
Query:  124 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 522
            HS+ +T++G ++S+G N  GQLGHG T+    PR I +L              T+ ++D G V+AFG++  G+   G Q T  V SP  +       + + A G  F+ ++  +G +Y+F      +LGH+++
Sbjct:  159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQI-MYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSD 289          
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC5_HUMAN (Probable E3 ubiquitin-protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.551e-12
Identity = 43/147 (29.25%), Postives = 75/147 (51.02%), Query Frame = 1
Query:  103 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 540
            Q   G  HS+A++  G ++++G N  GQLG G        P+ +  L              +M +S +G +Y++GK+  G+   G+  T+    P L+E L N  V   A G   +A+L+++G ++TF  G   +LGH++  N++ P
Sbjct:  142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQL--GLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286          

HSP 2 Score: 68.5514 bits (166), Expect = 2.239e-11
Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 1
Query:  100 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGH 513
            +Q  AG  HS+A++  G +YS+G N  GQLG G TE +  P  I  L              + L++  G ++ FG    G  + G   T+    P LV  L    V Q A G + T A +S  G+V++F  G D +LG+
Sbjct:  194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHG--QLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 330          
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: RCC2_HUMAN (Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.645e-12
Identity = 40/133 (30.08%), Postives = 69/133 (51.88%), Query Frame = 1
Query:  124 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 522
            HS+ +T++G ++S+G N  GQLGHG T+    PR I  L              T+ +++ G V+AFG++  G+   G Q T  V SP  +       + + A G  F+ ++  +G +Y+F      +LGH+++
Sbjct:  161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQI-MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSD 291          
The following BLAST results are available for this feature:
BLAST of CX307866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
HERC2_HUMAN3.339e-1531.16Probable E3 ubiquitin-protein ligase HERC2 OS=Homo... [more]
HERC2_MOUSE4.360e-1530.43Probable E3 ubiquitin-protein ligase HERC2 OS=Mus ... [more]
HERC2_DROME3.125e-1333.09Probable E3 ubiquitin-protein ligase HERC2 OS=Dros... [more]
RCC2_DANRE5.330e-1330.07Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 S... [more]
HERC4_MOUSE5.330e-1333.99Probable E3 ubiquitin-protein ligase HERC4 OS=Mus ... [more]
HERC4_HUMAN5.330e-1327.89Probable E3 ubiquitin-protein ligase HERC4 OS=Homo... [more]
HERC4_RAT6.961e-1333.79Probable E3 ubiquitin-protein ligase HERC4 OS=Ratt... [more]
RCC2_MOUSE1.187e-1230.83Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1[more]
HERC5_HUMAN1.551e-1229.25Probable E3 ubiquitin-protein ligase HERC5 OS=Homo... [more]
RCC2_HUMAN2.645e-1230.08Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC20002H11SK OF2 Citrus clementina cDNA clone C20002H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307866 ID=CX307866; Name=CX307866; organism=Citrus clementina; type=EST; length=540bp
GAAGCAGAACGTCAAGATTTGAAGCAAAAATGCGGGGGTTCTTGGAAACT
GGTGCTGAGGTTTTTGCTGGCTGGAGAAGCATGTTGCAGGAGGGAGAATT
CCCAGGCGATAGCTGGGCCTGGTCATAGTATTGCTGTGACATCAAAGGGA
GTAGTTTATTCATTTGGCTCTAACAGCTCTGGGCAGCTTGGACATGGCAC
CACTGAAGAAGAATGGCGACCCCGGCCTATCAGATCTCTGCAAGGCATTC
GAATCATCCAAGCAGCTGCTGGTGCTGGCCGGACAATGCTGATTAGTGAT
GCTGGGCAAGTTTATGCCTTCGGCAAGGACTCCTTTGGTGAAGCAGAGTA
CGGGGTCCAAGGAACTAAGCTGGTCACAAGCCCACAGCTGGTTGAGTCTT
TGAAAAATATATTTGTGGTGCAAGCTGCAATTGGAAATTTCTTTACAGCT
GTACTGTCAAGGGAAGGCAGGGTTTATACCTTTTCTTGGGGAAATGATGC
GAGACTGGGTCACCATACTGAGCCTAATGACGTGGAGCCT
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