CX307866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC2_HUMAN (Probable E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.339e-15 Identity = 43/138 (31.16%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX--TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 522 G +S A+T++G +Y++G + G+LGHG++E+E P + L T+ +++ GQV+++G +G+ G G+ +P+L+E L+++ VV+ G+ F+ L+++G+VY++ G++ RLGH TE Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694 HSP 2 Score: 70.4774 bits (171), Expect = 5.893e-12 Identity = 41/145 (28.28%), Postives = 75/145 (51.72%), Query Frame = 1 Query: 112 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX--TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 540 AG HS VT+ G +Y++G G+LGH +E++ +P+ + +L T+ ++D V+++G +G+ G G+ P ++SL + VV+ G+ F+ L++ G VYT+ G+ RLGH ++ + P Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4240
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC2_MOUSE (Probable E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 4.360e-15 Identity = 42/138 (30.43%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX--TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 522 G +S A+T++G +Y++G + G+LGHG++E+E P + L T+ +++ GQV+++G +G+ G G+ +P+L+E L+++ V++ G+ F+ L+++G+VY++ G++ RLGH TE Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695 HSP 2 Score: 70.4774 bits (171), Expect = 5.893e-12 Identity = 41/145 (28.28%), Postives = 75/145 (51.72%), Query Frame = 1 Query: 112 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX--TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 540 AG HS VT+ G +Y++G G+LGH +E++ +P+ + +L T+ ++D V+++G +G+ G G+ P ++SL + VV+ G+ F+ L++ G VYT+ G+ RLGH ++ + P Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRP 4242 HSP 3 Score: 67.3958 bits (163), Expect = 4.989e-11 Identity = 42/144 (29.17%), Postives = 72/144 (50.00%), Query Frame = 1 Query: 115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--XXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 540 G HS +TS G +Y++G G+LGHG + +P+ ++ L T+ ++D G V+++G FG+ G G++ PQ +E L V Q G F+ L++ G V+T+ G+ RLGH ++ + +P Sbjct: 3108 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKP 3249
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC2_DROME (Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 3.125e-13 Identity = 45/136 (33.09%), Postives = 72/136 (52.94%), Query Frame = 1 Query: 115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX--TMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 513 G HS A+T+ G V ++G G+LGHG +E++ RP+ + +L T+ I+D V+++G +G+ G G KL P +ESL + VV+ G+ F+ L++ G VYT+ G+ RLGH Sbjct: 4196 GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKL---PYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4328 HSP 2 Score: 72.0182 bits (175), Expect = 2.025e-12 Identity = 44/148 (29.73%), Postives = 75/148 (50.68%), Query Frame = 1 Query: 76 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--XXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 513 EA ++ G HS A++S+G +Y++G G+LGHG + +P+ + +L T+ +++ G V+++G FG+ G G++ +P +E L I VVQ G F+ L+R G V+T+ G+ RLGH Sbjct: 3120 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG--GSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3265
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: RCC2_DANRE (Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.330e-13 Identity = 43/143 (30.07%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 100 SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 522 S ++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L T+ +++ G VY FG++ G+ G Q T V SP ++ +V+ A G F+ ++ +G +Y+F +LGH+++ Sbjct: 124 SCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQ-TDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSD 264
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC4_MOUSE (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 5.330e-13 Identity = 52/153 (33.99%), Postives = 83/153 (54.25%), Query Frame = 1 Query: 94 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEP 540 +N A+A G H++A+ KG VY++G +S GQLG +EE R PR I+SL ++ +S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G + VL+ G + F WG + +LG + E + P Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVP 233 HSP 2 Score: 69.3218 bits (168), Expect = 1.313e-11 Identity = 43/129 (33.33%), Postives = 69/129 (53.49%), Query Frame = 1 Query: 115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 498 G H++ V G VY+ G N GQLGH + + +P + +L T+ ++D GQVYA+G DS G + G+QG+ + + P+ ++SL +I +VQ A G + + LS+ V F WG + Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG--QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQN 164
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC4_HUMAN (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.330e-13 Identity = 41/147 (27.89%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 103 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 540 Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL + +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L++EG V+TF G +LGH++ +++ P Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285 HSP 2 Score: 70.8626 bits (172), Expect = 4.512e-12 Identity = 49/145 (33.79%), Postives = 77/145 (53.10%), Query Frame = 1 Query: 115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEP 540 G H++A+ KG VY++G +S GQLG +EE R PR I+SL ++ +S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G + F WG + +LG + E + P Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD-CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVP 233 HSP 3 Score: 67.0106 bits (162), Expect = 6.516e-11 Identity = 42/137 (30.66%), Postives = 71/137 (51.82%), Query Frame = 1 Query: 115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 522 G H++ V G VY+ G N GQLGH + + +P + +L T+ ++D GQVYA+G DS G + G+ G+ + + P+ ++SL +I +VQ A G + + LS+ V+ + +LG T+ Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG--QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC4_RAT (Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.961e-13 Identity = 49/145 (33.79%), Postives = 79/145 (54.48%), Query Frame = 1 Query: 115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEP 540 G H++A+ KG VY++G +S GQLG +EE R PR I+SL ++ +S A +V+ +G++ +G+ G++ K TSPQL++SL I +Q A G + VL+ G + F WG + +LG + E + P Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVP 233 HSP 2 Score: 72.7886 bits (177), Expect = 1.187e-12 Identity = 41/147 (27.89%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 103 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 540 Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL + +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L++EG V+TF G +LGH++ +++ P Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285 HSP 3 Score: 69.3218 bits (168), Expect = 1.313e-11 Identity = 43/129 (33.33%), Postives = 69/129 (53.49%), Query Frame = 1 Query: 115 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 498 G H++ V G VY+ G N GQLGH + + +P + +L T+ ++D GQVYA+G DS G + G+QG+ + + P+ ++SL +I +VQ A G + + LS+ V F WG + Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG--QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQN 164
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: RCC2_MOUSE (Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.187e-12 Identity = 41/133 (30.83%), Postives = 70/133 (52.63%), Query Frame = 1 Query: 124 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 522 HS+ +T++G ++S+G N GQLGHG T+ PR I +L T+ ++D G V+AFG++ G+ G Q T V SP + + + A G F+ ++ +G +Y+F +LGH+++ Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQI-MYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSD 289
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: HERC5_HUMAN (Probable E3 ubiquitin-protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.551e-12 Identity = 43/147 (29.25%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 103 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 540 Q G HS+A++ G ++++G N GQLG G P+ + L +M +S +G +Y++GK+ G+ G+ T+ P L+E L N V A G +A+L+++G ++TF G +LGH++ N++ P Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQL--GLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286 HSP 2 Score: 68.5514 bits (166), Expect = 2.239e-11 Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 1 Query: 100 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGH 513 +Q AG HS+A++ G +YS+G N GQLG G TE + P I L + L++ G ++ FG G + G T+ P LV L V Q A G + T A +S G+V++F G D +LG+ Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHG--QLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 330
BLAST of CX307866 vs. ExPASy Swiss-Prot
Match: RCC2_HUMAN (Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.645e-12 Identity = 40/133 (30.08%), Postives = 69/133 (51.88%), Query Frame = 1 Query: 124 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 522 HS+ +T++G ++S+G N GQLGHG T+ PR I L T+ +++ G V+AFG++ G+ G Q T V SP + + + A G F+ ++ +G +Y+F +LGH+++ Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQI-MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSD 291 The following BLAST results are available for this feature:
BLAST of CX307866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX307866 ID=CX307866; Name=CX307866; organism=Citrus clementina; type=EST; length=540bpback to top |