CX307901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307901 vs. ExPASy Swiss-Prot
Match: PWP2_YEAST (Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae GN=PWP2 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 2.076e-21 Identity = 53/129 (41.09%), Postives = 80/129 (62.02%), Query Frame = 1 Query: 28 KLDYDLPGALPNHG------RPTIRTKCLKIAPTGRNFVAATTEGVLVYSIDESFIFDPTDLDIDVTPEAVDAALNEDQPNRALILSLRLNEDNLIKKCIFAIRPVDIPAVASSIPYRYMQRLIEALSD 396 ++D LPG+ RP +R ++ +PT F AA+TEG+L+YS +++ +FDP DLD+DVTP + AL E Q AL+++ RLNE+ LI K AI +IP VAS+IP Y+ R+++ + D Sbjct: 656 RIDNSLPGSQRGGDLSTRKMRPEVRVTSVQFSPTANAFAAASTEGLLIYSTNDTILFDPFDLDVDVTPHSTVEALREKQFLNALVMAFRLNEEYLINKVYEAIPIKEIPLVASNIPAIYLPRILKFIGD 784
BLAST of CX307901 vs. ExPASy Swiss-Prot
Match: PWP2_HUMAN (Periodic tryptophan protein 2 homolog OS=Homo sapiens GN=PWP2 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 2.997e-20 Identity = 46/110 (41.82%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 64 HGRPTIRTKCLKIAPTGRNFVAATTEGVLVYSIDESFIFDPTDLDIDVTPEAVDAALNEDQPNRALILSLRLNEDNLIKKCIFAIRPVDIPAVASSIPYRYMQRLIEALS 393 H +P IR L+ +PTGR + A TTEG+L+YS+D +FDP +LD VTP V AL + RA++++LRLNE L+++ + A+ +I V SS+P Y+++++E L+ Sbjct: 698 HFKPEIRVTSLRFSPTGRCWAATTTEGLLIYSLDTRVLFDPFELDTSVTPGRVREALRQQDFTRAILMALRLNESKLVQEALEAVPRGEIEVVTSSLPELYVEKVLEFLA 807
BLAST of CX307901 vs. ExPASy Swiss-Prot
Match: PWP2_PONAB (Periodic tryptophan protein 2 homolog OS=Pongo abelii GN=PWP2 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.721e-20 Identity = 44/110 (40.00%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 64 HGRPTIRTKCLKIAPTGRNFVAATTEGVLVYSIDESFIFDPTDLDIDVTPEAVDAALNEDQPNRALILSLRLNEDNLIKKCIFAIRPVDIPAVASSIPYRYMQRLIEALS 393 H +P IR L+ +PTGR + A TTEG+L++S+D +FDP +LD +TP V AL + RA++++LRLNE L+++ + A+ +I V SS+P Y+++++E L+ Sbjct: 695 HFKPEIRVTSLRFSPTGRCWAATTTEGLLIFSLDTRVLFDPFELDTSITPGRVREALRQQDFTRAILMALRLNESKLVQEALEAVPSGEIEVVTSSLPELYVEKVLEFLA 804
BLAST of CX307901 vs. ExPASy Swiss-Prot
Match: PWP2_MOUSE (Periodic tryptophan protein 2 homolog OS=Mus musculus GN=Pwp2 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.163e-18 Identity = 41/110 (37.27%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 64 HGRPTIRTKCLKIAPTGRNFVAATTEGVLVYSIDESFIFDPTDLDIDVTPEAVDAALNEDQPNRALILSLRLNEDNLIKKCIFAIRPVDIPAVASSIPYRYMQRLIEALS 393 H +P IR L+ +PTGR + A +TEG+L++S+D +FDP +LD VTP + AL + + RA++++ RLNE L ++ + A+ +I V++S+P Y+ +++E L+ Sbjct: 698 HFKPEIRVTSLRFSPTGRCWAATSTEGLLIFSLDAQMLFDPFELDTSVTPGRIREALRQREFTRAILMAFRLNEKKLAQEALEAVPQNEIEVVSTSLPELYVVKVLEFLA 807
BLAST of CX307901 vs. ExPASy Swiss-Prot
Match: PWP2_DICDI (Periodic tryptophan protein 2 homolog OS=Dictyostelium discoideum GN=pwp2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.179e-16 Identity = 40/104 (38.46%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 82 RTKCLKIAPTGRNFVAATTEGVLVYSIDESFIFDPTDLDIDVTPEAVDAALNEDQPNRALILSLRLNEDNLIKKCIFAIRPVDIPAVASSIPYRYMQRLIEALS 393 +T + ++PTGR + +TTEG+L+YS+D+ FDPTDL ID+ P+++ + LN ++LI+S++LNE +I+K +I +I V P Y++ I+ LS Sbjct: 695 KTTSISVSPTGRAWAVSTTEGLLIYSLDDFLFFDPTDLSIDINPDSILSELNLKNYLKSLIMSIKLNEKPIIEKVFESIPFNEIQLVCQEFPIYYLKNFIQFLS 798
BLAST of CX307901 vs. ExPASy Swiss-Prot
Match: PWP2_NEUCR (Periodic tryptophan protein 2 homolog OS=Neurospora crassa GN=B18D24.40 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.430e-16 Identity = 47/124 (37.90%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 28 KLDYDLPGAL---PNHGR--PTIRTKCLKIAPTGRNFVAATTEGVLVYSIDESFIFDPTDLDIDVTPEAVDAALNEDQPN-RALILSLRLNEDNLIKKCIFAIRPVDIPAVASSIPYRYMQRLI 381 ++D LPG+ P+ R P +R + +P G F AA+TEG+L+YS+D + FDP DL++++TP + A L +++ +AL+++ RLNE LI++ AI DIP V P Y+ RL+ Sbjct: 650 RIDRSLPGSKRGDPSARRKNPEVRVNGVAFSPNGSAFCAASTEGLLIYSLDTTIQFDPFDLNMEITPTSTLAVLEKEKDYLKALVMAFRLNEAGLIQRVFQAIPYTDIPLVVEQFPNVYVARLL 773
BLAST of CX307901 vs. ExPASy Swiss-Prot
Match: PWP2_SCHPO (Periodic tryptophan protein 2 homolog OS=Schizosaccharomyces pombe GN=SPBC713.04c PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.468e-15 Identity = 44/133 (33.08%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 10 EKQTRGKLDYDLPGAL-----PNHGRPTIRTKCLKIAPTGRNFVAATTEGVLVYSIDESFIFDPTDLDIDVTPEAVDAALNEDQPNRALILSLRLNEDNLIKKCIFAIRPVDIPAVASSIPYRYMQRLIEALS 393 E ++D LPGA RP I ++ +P+G F AATTEG+++YS+ F+FDP +LD+D+TP E + +L+++LRLNE +++K +I D+ V +P Y+ + LS Sbjct: 644 ESDLEDRIDRTLPGARRGDLSARKTRPEIICHGVQFSPSGGAFAAATTEGLMIYSLYNDFLFDPINLDMDITPSTTLTMCAEGEFLISLVMALRLNEYKVVQKVYESIPITDVEHVVQELPVSYLANFMGYLS 776
BLAST of CX307901 vs. ExPASy Swiss-Prot
Match: PWP2_CAEEL (Periodic tryptophan protein 2 homolog OS=Caenorhabditis elegans GN=F55F8.3 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 8.447e-15 Identity = 45/130 (34.62%), Postives = 65/130 (50.00%), Query Frame = 1 Query: 10 EKQTRGKLDYDLPGAL-----PNHGRPTIRTKCLKIAPTGRNFVAATTEGVLVYSIDESFIFDPTDLDIDVTPEAVDAALNEDQPNRALILSLRLNEDNLIKKCIFAIRPVDIPAVASSIPYRYMQRLIE 384 E + K+ LPG RP + + PTGR F +TEGV VYS+D +FDP LD E + A+ + + A++ SLRLN I +C+ + IP VASS+P Y +RL++ Sbjct: 663 ELEPNNKMSIKLPGTKNFDLGERRARPEVNIYEVTYCPTGRRFAICSTEGVSVYSLDTISMFDPFQLDSQTNAEVIKRAVWNNDYSTAIMASLRLNNAQYITECLESTSISQIPLVASSLPLMYAERLLK 792 The following BLAST results are available for this feature:
BLAST of CX307901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX307901 ID=CX307901; Name=CX307901; organism=Citrus clementina; type=EST; length=396bpback to top |