CX307905 | Citrus Genome Database

Overview


Name	CX307905
Unique Name	CX307905
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	393

Libraries


Library Name	Type
OF2	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX307905 vs. ExPASy Swiss-Prot
Match: BZW2_MUSMM (Basic leucine zipper and W2 domain-containing protein 2 OS=Mus musculus molossinus GN=Bzw2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.457e-16
Identity = 44/125 (35.20%), Postives = 73/125 (58.40%), Query Frame = 2

Query:   17 KDMKSTLTTQIAEETEMSEVIESVKQRVKDAKLPDIEVVRILWDILMDAVQWSGKXXXXXXXXXLRQVKTWAQLLNTFCTNAKLELELMYKVQMQCYEDAKLMKLFPEIVRSLYDQDVLAEDTIL 391
            K+++  L  ++++E  + EV+  VK+ +K   LP+  V+ +LW  +M+AV+W+ K         L+ +K +A LL  F +  + EL L+ KVQ  CY++   MK F +IV   Y  DVL+E+ IL
Sbjct:  256 KELQKELQERLSQECPIKEVVLYVKEEMKRNDLPETAVIGLLWTCIMNAVEWN-KKEELVAEQALKHLKQYAPLLAVFSSQGQSELVLLQKVQEYCYDNIHFMKAFQKIVVLFYKADVLSEEAIL 379

[Close]

BLAST of CX307905 vs. ExPASy Swiss-Prot
Match: BZW2_MOUSE (Basic leucine zipper and W2 domain-containing protein 2 OS=Mus musculus GN=Bzw2 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.457e-16
Identity = 44/125 (35.20%), Postives = 73/125 (58.40%), Query Frame = 2

Query:   17 KDMKSTLTTQIAEETEMSEVIESVKQRVKDAKLPDIEVVRILWDILMDAVQWSGKXXXXXXXXXLRQVKTWAQLLNTFCTNAKLELELMYKVQMQCYEDAKLMKLFPEIVRSLYDQDVLAEDTIL 391
            K+++  L  ++++E  + EV+  VK+ +K   LP+  V+ +LW  +M+AV+W+ K         L+ +K +A LL  F +  + EL L+ KVQ  CY++   MK F +IV   Y  DVL+E+ IL
Sbjct:  256 KELQKELQERLSQECPIKEVVLYVKEEMKRNDLPETAVIGLLWTCIMNAVEWN-KKEELVAEQALKHLKQYAPLLAVFSSQGQSELVLLQKVQEYCYDNIHFMKAFQKIVVLFYKADVLSEEAIL 379

[Close]

BLAST of CX307905 vs. ExPASy Swiss-Prot
Match: BZW2_RAT (Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus GN=Bzw2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.514e-16
Identity = 44/125 (35.20%), Postives = 73/125 (58.40%), Query Frame = 2

Query:   17 KDMKSTLTTQIAEETEMSEVIESVKQRVKDAKLPDIEVVRILWDILMDAVQWSGKXXXXXXXXXLRQVKTWAQLLNTFCTNAKLELELMYKVQMQCYEDAKLMKLFPEIVRSLYDQDVLAEDTIL 391
            K+++  L  ++++E  + EV+  VK+ +K   LP+  V+ +LW  +M+AV+W+ K         L+ +K +A LL  F +  + EL L+ KVQ  CY++   MK F +IV   Y  DVL+E+ IL
Sbjct:  256 KELQKELQERLSQECPIKEVVLYVKEEMKRNDLPETAVIGLLWTCVMNAVEWN-KKEELVAEQALKHLKQYAPLLAVFSSQGQSELVLLQKVQEYCYDNIHFMKAFQKIVVLFYKADVLSEEAIL 379

[Close]

BLAST of CX307905 vs. ExPASy Swiss-Prot
Match: BZW2_MACFA (Basic leucine zipper and W2 domain-containing protein 2 OS=Macaca fascicularis GN=BZW2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.514e-16
Identity = 44/125 (35.20%), Postives = 73/125 (58.40%), Query Frame = 2

Query:   17 KDMKSTLTTQIAEETEMSEVIESVKQRVKDAKLPDIEVVRILWDILMDAVQWSGKXXXXXXXXXLRQVKTWAQLLNTFCTNAKLELELMYKVQMQCYEDAKLMKLFPEIVRSLYDQDVLAEDTIL 391
            K+++  L  ++++E  + EV+  VK+ +K   LP+  V+ +LW  +M+AV+W+ K         L+ +K +A LL  F +  + EL L+ KVQ  CY++   MK F +IV   Y  DVL+E+ IL
Sbjct:  256 KELQKELQERLSQECPIKEVVLYVKEEMKRNDLPETAVIGLLWTCIMNAVEWN-KKEELVAEQALKHLKQYAPLLAVFSSQGQSELILLQKVQEYCYDNIHFMKAFQKIVVLFYKADVLSEEAIL 379

[Close]

BLAST of CX307905 vs. ExPASy Swiss-Prot
Match: BZW2_HUMAN (Basic leucine zipper and W2 domain-containing protein 2 OS=Homo sapiens GN=BZW2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.514e-16
Identity = 44/125 (35.20%), Postives = 73/125 (58.40%), Query Frame = 2

Query:   17 KDMKSTLTTQIAEETEMSEVIESVKQRVKDAKLPDIEVVRILWDILMDAVQWSGKXXXXXXXXXLRQVKTWAQLLNTFCTNAKLELELMYKVQMQCYEDAKLMKLFPEIVRSLYDQDVLAEDTIL 391
            K+++  L  ++++E  + EV+  VK+ +K   LP+  V+ +LW  +M+AV+W+ K         L+ +K +A LL  F +  + EL L+ KVQ  CY++   MK F +IV   Y  DVL+E+ IL
Sbjct:  256 KELQKELQERLSQECPIKEVVLYVKEEMKRNDLPETAVIGLLWTCIMNAVEWN-KKEELVAEQALKHLKQYAPLLAVFSSQGQSELILLQKVQEYCYDNIHFMKAFQKIVVLFYKADVLSEEAIL 379

[Close]

BLAST of CX307905 vs. ExPASy Swiss-Prot
Match: BZW2_CHICK (Basic leucine zipper and W2 domain-containing protein 2 OS=Gallus gallus GN=BZW2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.514e-16
Identity = 44/125 (35.20%), Postives = 74/125 (59.20%), Query Frame = 2

Query:   17 KDMKSTLTTQIAEETEMSEVIESVKQRVKDAKLPDIEVVRILWDILMDAVQWSGKXXXXXXXXXLRQVKTWAQLLNTFCTNAKLELELMYKVQMQCYEDAKLMKLFPEIVRSLYDQDVLAEDTIL 391
            K+++  L  ++++E  + E++  VK+ +K  +LP+  V+ +LW  +M+AV+W+ K         L+ +K +A LL  F T  + EL L+ KVQ  CY++   MK F +IV   Y  DVL+E+ IL
Sbjct:  256 KELQKELQERLSQECPIKEMVLYVKEEMKRNELPEPAVIGLLWTCVMNAVEWN-KKEELVAEQALKHLKQYAPLLAVFSTQGQSELILLQKVQEYCYDNIHFMKAFQKIVVLFYKADVLSEEAIL 379

[Close]

BLAST of CX307905 vs. ExPASy Swiss-Prot
Match: BZW2_DANRE (Basic leucine zipper and W2 domain-containing protein 2 OS=Danio rerio GN=bzw2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.897e-14
Identity = 40/125 (32.00%), Postives = 72/125 (57.60%), Query Frame = 2

Query:   17 KDMKSTLTTQIAEETEMSEVIESVKQRVKDAKLPDIEVVRILWDILMDAVQWSGKXXXXXXXXXLRQVKTWAQLLNTFCTNAKLELELMYKVQMQCYEDAKLMKLFPEIVRSLYDQDVLAEDTIL 391
            K+++  L  +++++  + E++  VK+ +K   L +  V+ +LW  LM+AV+W+ K         L+ +K +A LL  F T  + EL L+ K+Q  CY++   MK F +IV   Y  DV++E+ I+
Sbjct:  258 KELQKELQERLSQQCPIREIVVYVKEEMKKNDLQEQAVIGLLWTCLMNAVEWN-KKEELVTEQALKHLKHYAPLLAVFSTQGQSELVLLLKIQEYCYDNIHFMKSFSKIVVLFYKADVVSEEAIM 381

[Close]

BLAST of CX307905 vs. ExPASy Swiss-Prot
Match: BZW1_RAT (Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus GN=Bzw1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.577e-13
Identity = 38/125 (30.40%), Postives = 68/125 (54.40%), Query Frame = 2

Query:   17 KDMKSTLTTQIAEETEMSEVIESVKQRVKDAKLPDIEVVRILWDILMDAVQWSGKXXXXXXXXXLRQVKTWAQLLNTFCTNAKLELELMYKVQMQCYEDAKLMKLFPEIVRSLYDQDVLAEDTIL 391
            K+++  L  Q++      ++I  VK+ +K   +P+  V+ I+W  +M  V+W+ K         ++ +K ++ LL  F T  + EL L+ K+Q  CY++   MK F +IV   Y  +VL+E+ IL
Sbjct:  255 KELQKELQEQMSRGDPFKDIILYVKEEMKKNNIPEPVVIGIVWSSVMSTVEWN-KKEELVAEQAIKHLKQYSPLLAAFTTQGQSELTLLLKIQEYCYDNIHFMKAFQKIVVLFYKAEVLSEEPIL 378

[Close]

BLAST of CX307905 vs. ExPASy Swiss-Prot
Match: BZW1_MOUSE (Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus GN=Bzw1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.577e-13
Identity = 38/125 (30.40%), Postives = 68/125 (54.40%), Query Frame = 2

Query:   17 KDMKSTLTTQIAEETEMSEVIESVKQRVKDAKLPDIEVVRILWDILMDAVQWSGKXXXXXXXXXLRQVKTWAQLLNTFCTNAKLELELMYKVQMQCYEDAKLMKLFPEIVRSLYDQDVLAEDTIL 391
            K+++  L  Q++      ++I  VK+ +K   +P+  V+ I+W  +M  V+W+ K         ++ +K ++ LL  F T  + EL L+ K+Q  CY++   MK F +IV   Y  +VL+E+ IL
Sbjct:  255 KELQKELQEQMSRGDPFKDIILYVKEEMKKNNIPEPVVIGIVWSSVMSTVEWN-KKEELVAEQAIKHLKQYSPLLAAFTTQGQSELTLLLKIQEYCYDNIHFMKAFQKIVVLFYKAEVLSEEPIL 378

[Close]

BLAST of CX307905 vs. ExPASy Swiss-Prot
Match: BZW1_HUMAN (Basic leucine zipper and W2 domain-containing protein 1 OS=Homo sapiens GN=BZW1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.577e-13
Identity = 38/125 (30.40%), Postives = 68/125 (54.40%), Query Frame = 2

Query:   17 KDMKSTLTTQIAEETEMSEVIESVKQRVKDAKLPDIEVVRILWDILMDAVQWSGKXXXXXXXXXLRQVKTWAQLLNTFCTNAKLELELMYKVQMQCYEDAKLMKLFPEIVRSLYDQDVLAEDTIL 391
            K+++  L  Q++      ++I  VK+ +K   +P+  V+ I+W  +M  V+W+ K         ++ +K ++ LL  F T  + EL L+ K+Q  CY++   MK F +IV   Y  +VL+E+ IL
Sbjct:  255 KELQKELQEQMSRGDPFKDIILYVKEEMKKNNIPEPVVIGIVWSSVMSTVEWN-KKEELVAEQAIKHLKQYSPLLAAFTTQGQSELTLLLKIQEYCYDNIHFMKAFQKIVVLFYKAEVLSEEPIL 378

The following BLAST results are available for this feature:

BLAST of CX307905 vs. ExPASy Swiss-Prot

BLAST of CX307905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18


Match Name	E-value	Identity	Description
BZW2_MUSMM	3.457e-16	35.20	Basic leucine zipper and W2 domain-containing prot...	[more]
BZW2_MOUSE	3.457e-16	35.20	Basic leucine zipper and W2 domain-containing prot...	[more]
BZW2_RAT	4.514e-16	35.20	Basic leucine zipper and W2 domain-containing prot...	[more]
BZW2_MACFA	4.514e-16	35.20	Basic leucine zipper and W2 domain-containing prot...	[more]
BZW2_HUMAN	4.514e-16	35.20	Basic leucine zipper and W2 domain-containing prot...	[more]
BZW2_CHICK	4.514e-16	35.20	Basic leucine zipper and W2 domain-containing prot...	[more]
BZW2_DANRE	1.897e-14	32.00	Basic leucine zipper and W2 domain-containing prot...	[more]
BZW1_RAT	3.577e-13	30.40	Basic leucine zipper and W2 domain-containing prot...	[more]
BZW1_MOUSE	3.577e-13	30.40	Basic leucine zipper and W2 domain-containing prot...	[more]
BZW1_HUMAN	3.577e-13	30.40	Basic leucine zipper and W2 domain-containing prot...	[more]

Pages

Properties


Property Name	Value
Genbank description	C20003D12SK OF2 Citrus clementina cDNA clone C20003D12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX307905 ID=CX307905; Name=CX307905; organism=Citrus clementina; type=EST; length=393bp
ATTTGAAGTAAAACTAAAGGATATGAAATCTACTTTGACAACTCAAATAG
CAGAGGAGACTGAAATGTCTGAAGTCATAGAATCTGTGAAACAACGGGTT
AAAGATGCTAAATTACCTGACATTGAGGTTGTTAGGATACTGTGGGATAT
CTTGATGGATGCAGTTCAGTGGTCTGGGAAGAACCAGCAGCAGAATGCTA
ATGCAGCTCTGCGTCAGGTAAAAACCTGGGCACAACTGTTAAATACCTTC
TGCACCAATGCGAAACTTGAGCTGGAGCTGATGTACAAAGTTCAGATGCA
GTGCTACGAGGATGCTAAGCTGATGAAGCTATTTCCTGAGATTGTTAGGT
CTCTCTATGATCAGGATGTGCTTGCGGAAGATACAATCCTTTA