CX307906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYDC1_DICDI (Aspartyl-tRNA synthetase, cytoplasmic 1 OS=Dictyostelium discoideum GN=aspS1 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 4.092e-41 Identity = 79/133 (59.40%), Postives = 102/133 (76.69%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGL 400 +D+R A+Q IFR+QS V +FR+ LL E F+EIH+PK+I+ +SE G++VF+L+Y A LAQSPQL+KQM+IC DF +VFE GPVFRAE+S THRHL EF GLD+EM K HY E +D +DRL +IF GL Sbjct: 258 LDLRVPAHQSIFRLQSGVCTLFREQLLGEGFIEIHSPKIISAASESGASVFKLNYFNTHAYLAQSPQLYKQMAICADFNKVFEIGPVFRAENSNTHRHLTEFVGLDLEMTFKDHYHEALDTLDRLMTSIFRGL 390
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYDC_YEAST (Aspartyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=DPS1 PE=1 SV=3) HSP 1 Score: 157.147 bits (396), Expect = 2.483e-38 Identity = 76/133 (57.14%), Postives = 97/133 (72.93%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGL 400 ID+RT+ NQ IFRIQ+ V +FR++L ++ F E+HTPKL+ SEGGS+VF + Y A LAQSPQ +KQ I DF RV+E GPVFRAE+S THRH+ EFTGLD+EM ++HY EV+D + LFV IF L Sbjct: 237 IDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEGGSSVFEVTYFKGKAYLAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSEL 369
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYDC_HUMAN (Aspartyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=DARS PE=1 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 9.435e-38 Identity = 75/133 (56.39%), Postives = 97/133 (72.93%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGL 400 ID+RT +Q +FR+QS + ++FR+ L+++ FVEI TPK+I+ +SEGG+ VF + Y +A LAQSPQL+KQM IC DF +VF GPVFRAEDS THRHL EF GLD+EM HY EVM+ + V IF GL Sbjct: 185 IDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSYFKNNAYLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGL 317
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYDC_PONAB (Aspartyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=DARS PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.745e-37 Identity = 75/133 (56.39%), Postives = 97/133 (72.93%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGL 400 ID+RT +Q +FR+QS + ++FR+ L+++ FVEI TPK+I+ +SEGG+ VF + Y +A LAQSPQL+KQM IC DF +VF GPVFRAEDS THRHL EF GLD+EM HY EVM+ + V IF GL Sbjct: 185 IDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSYFKNNAYLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGL 317
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYDC_SCHPO (Aspartyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=dps1 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.585e-37 Identity = 75/130 (57.69%), Postives = 95/130 (73.08%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIF 391 +D+RT NQ IF IQ+ + FR+FLLS +F EIHTPK+ SSEGGS VF++ Y L+QSPQL+KQM I D RVFE GPVFRAEDS T+RH+ EFTGLD+EM +HY EVM+ +++LF+ IF Sbjct: 243 LDLRTPTNQAIFDIQAGICQAFREFLLSNSFNEIHTPKMSGASSEGGSNVFKIQYFKTDGFLSQSPQLYKQMLIAADRERVFEIGPVFRAEDSNTYRHMTEFTGLDLEMAFNEHYHEVMEFIEKLFLYIF 372
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYDC_MOUSE (Aspartyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Dars PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.115e-37 Identity = 75/133 (56.39%), Postives = 97/133 (72.93%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGL 400 ID+RT +Q IFR+QS + ++FR+ L+++ FVEI TPK+I+ +SEGG+ VF + Y +A LAQSPQL+KQM IC DF +VF GPVFRAEDS THRHL EF GLD+EM HY EV++ + V IF GL Sbjct: 185 IDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSYFKNNAYLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGL 317
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYDC_RAT (Aspartyl-tRNA synthetase, cytoplasmic OS=Rattus norvegicus GN=Dars PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.324e-36 Identity = 74/133 (55.64%), Postives = 96/133 (72.18%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGL 400 ID+RT +Q IF +QS + ++FR+ L+++ FVEI TPK+I+ +SEGG+ VF + Y +A LAQSPQL+KQM IC DF +VF GPVFRAEDS THRHL EF GLD+EM HY EV++ + V IF GL Sbjct: 185 IDLRTSTSQAIFHLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSYFKSNAYLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGL 317
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYDC_BOVIN (Aspartyl-tRNA synthetase, cytoplasmic OS=Bos taurus GN=DARS PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.177e-36 Identity = 75/133 (56.39%), Postives = 95/133 (71.43%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGL 400 ID+RT +Q IFR+QS + + FR+ L ++ FVEI TPK+I+ +SEGG+ VF + Y +A LAQSPQL+KQM IC DF +VF GPVFRAEDS THRHL EF GLD+EM HY EV++ + V IF GL Sbjct: 185 IDLRTSTSQAIFRLQSGICHPFRETLTNKGFVEIQTPKIISAASEGGANVFTVSYFKNNAYLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGL 317
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYDC_CAEEL (Aspartyl-tRNA synthetase, cytoplasmic OS=Caenorhabditis elegans GN=drs-1 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.265e-34 Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIFDGL 400 ID+RT + IFRIQ+ + N FR L FVEI PK+I+ SEGG+ VF + Y SA LAQSPQL+KQM+I GDF +V+ GPVFRAEDS THRH+ EF GLD+EM HY EVM+ + + +F GL Sbjct: 215 IDLRTPTSHAIFRIQAGICNQFRNILDVRGFVEIMAPKIISAPSEGGANVFEVSYFKGSAYLAQSPQLYKQMAIAGDFEKVYTIGPVFRAEDSNTHRHMTEFVGLDLEMAFNFHYHEVMETIAEVLTQMFKGL 347
BLAST of CX307906 vs. ExPASy Swiss-Prot
Match: SYDC2_DICDI (Aspartyl-tRNA synthetase, cytoplasmic 2 OS=Dictyostelium discoideum GN=aspS2 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.459e-30 Identity = 64/130 (49.23%), Postives = 89/130 (68.46%), Query Frame = 2 Query: 2 IDIRTLANQGIFRIQSQVGNIFRQFLLSENFVEIHTPKLIAGSSEGGSAVFRLDYKGQSACLAQSPQLHKQMSICGDFGRVFETGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYSEVMDIVDRLFVTIF 391 +D+RT N IF+IQS + N+FR LL +F+EIH+PK+I S S F+L+Y + A L++S Q ++Q++I DF RVFE GPV+R + +THRHL EFT LD EM K HY EV+D +D L ++IF Sbjct: 228 LDLRTFYNLSIFKIQSAISNLFRDQLLINDFIEIHSPKIIKQSINENS--FKLNYFNEIAYLSESTQFYRQLAIVSDFKRVFEIGPVYRTDLGHTHRHLNEFTSLDFEMTFKDHYHEVLDFLDNLMISIF 355 The following BLAST results are available for this feature:
BLAST of CX307906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307906 ID=CX307906; Name=CX307906; organism=Citrus clementina; type=EST; length=409bpback to top |