CX307912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307912 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.519e-31 Identity = 65/101 (64.36%), Postives = 73/101 (72.28%), Query Frame = 1 Query: 109 SAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAXXXXXXXXXXREHAEKFME 411 S+ VD N+MP+TGVVFQPFEEVKK ARQ+Y D EAAINEQINVEYNVSYVYH++YAYFDRDN+AL+GLA REHAEKFME Sbjct: 48 SSTVDTNNMPMTGVVFQPFEEVKKADLAIPITSNASLARQRYADSSEAAINEQINVEYNVSYVYHSMYAYFDRDNVALKGLAKFFKESSDEEREHAEKFME 148
BLAST of CX307912 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.453e-30 Identity = 65/106 (61.32%), Postives = 74/106 (69.81%), Query Frame = 1 Query: 94 RSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAXXXXXXXXXXREHAEKFME 411 ++L A D N+ PLTGVVF+PFEEVKKE ARQKY D+CEA INEQINVEYNVSYVYHA++AYFDRDN+AL+GLA REHAEK ME Sbjct: 39 KNLVPCATKDTNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDDCEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLME 144
BLAST of CX307912 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.419e-30 Identity = 69/132 (52.27%), Postives = 81/132 (61.36%), Query Frame = 1 Query: 16 LTTGSSCYSKSNASLVKLGGILPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAXXXXXXXXXXREHAEKFME 411 L+T S + N S G+L V A+ +N+ PLTGVVF+PFEEVKKE AR KY D+CEAA+NEQINVEYNVSYVYH +YAYFDRDN+AL+GLA R HAEK ME Sbjct: 23 LSTSSQGFVLKNFSTKSRNGLLV-------VCASKGSNTKPLTGVVFEPFEEVKKELMLVPTVPQVSLARHKYSDQCEAAVNEQINVEYNVSYVYHGMYAYFDRDNVALKGLARFFKESSEEERGHAEKLME 147
BLAST of CX307912 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.230e-29 Identity = 64/110 (58.18%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 82 PRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAXXXXXXXXXXREHAEKFME 411 P+ VSA+ N PLTGVVF+PFEE+KKE RQKY D+CEAAINEQINVEYN SYVYHA++AYFDRDN+AL+GLA REHAEK ME Sbjct: 31 PKNGNRFVVSASKATNHKPLTGVVFEPFEELKKELMLVPAVPDTSLCRQKYSDDCEAAINEQINVEYNNSYVYHAMFAYFDRDNVALKGLAKFFKESSLEEREHAEKLME 140
BLAST of CX307912 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.607e-29 Identity = 75/146 (51.37%), Postives = 85/146 (58.22%), Query Frame = 1 Query: 31 SCYSKSNASLVKLGGI-------LPRTKRSLKVSAAVDAN------------SMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAXXXXXXXXXXREHAEKFME 411 S S S SLV G+ LP +L+VS+ N + L+GVVF+PF+EVKKE ARQKY DECEAAINEQINVEYNVSYVYHA+YAYFDRDNIAL+GLA REHAEK ME Sbjct: 7 SSSSSSALSLVNFHGVKKDVSPLLPSISSNLRVSSGKSGNLTFSFRASKSSTTDALSGVVFEPFKEVKKELDLVPTSSHLSLARQKYSDECEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLME 152
BLAST of CX307912 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.741e-29 Identity = 72/133 (54.14%), Postives = 86/133 (64.66%), Query Frame = 1 Query: 16 LTTGSSCYSKSNASLVKLGGILPRTKRSLKVSAA-VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAXXXXXXXXXXREHAEKFME 411 L GS+ S S K+GG R++ V+AA VD N+MP+TGVVFQPFEEVKK ARQ++ D EA INEQINVEYNVSYVYH++YAYFDRDN+A++GLA R HAEKFME Sbjct: 22 LPHGSASPSVSLGFSRKVGG-----GRAVVVAAATVDTNNMPMTGVVFQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFME 149
BLAST of CX307912 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.776e-28 Identity = 71/127 (55.91%), Postives = 81/127 (63.78%), Query Frame = 1 Query: 40 SKSNASLVKLGGILPRT--KRSLKVSAAVDA-NSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAXXXXXXXXXXREHAEKFME 411 S S+ SL PR+ R L V AA + N LTGV+F+PFEEVKKE ARQKY DE E+A+NEQINVEYNVSYVYHA++AYFDRDN+ALRGLA REHAEK ME Sbjct: 9 SASSLSLFSPNAEPPRSVPARGLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLME 135
BLAST of CX307912 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.776e-28 Identity = 66/128 (51.56%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 28 SSCYSKSNASLVKLGGILPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAXXXXXXXXXXREHAEKFME 411 S C S S ++ V GG R+++V AA PLTGV+F+PF+E+KK+ +RQ Y DE EAAINEQINVEYNVSYVYH+L+AYFDRDNIAL+GLA REHAEK ++ Sbjct: 27 SLCSSSSLSASVNGGG-----SRNMRVCAAASNAPAPLTGVIFEPFQELKKDYLAVPIAPNVSLSRQNYSDEAEAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIK 149
BLAST of CX307912 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 2.320e-28 Identity = 67/113 (59.29%), Postives = 74/113 (65.49%), Query Frame = 1 Query: 76 ILPRTKRSLKVSAAVDA-NSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAXXXXXXXXXXREHAEKFME 411 +L L V AA + N LTGV+F+PFEEVKKE ARQKY DE EAA+NEQINVEYNVSYVYHAL+AYFDRDN+ALRGLA REHAEK ME Sbjct: 26 VLANNASRLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKLME 138
BLAST of CX307912 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.168e-28 Identity = 59/98 (60.20%), Postives = 70/98 (71.43%), Query Frame = 1 Query: 118 VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAXXXXXXXXXXREHAEKFME 411 V A+++PLTGV+F+PFEEVKKE ARQ Y DECE+AINEQINVEYN SYVYH+L+AYFDRDN+AL+G A REHAEK M+ Sbjct: 46 VSASTVPLTGVIFEPFEEVKKEELAVPTAGQVSLARQYYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFARFFKESSEEEREHAEKLMK 143 The following BLAST results are available for this feature:
BLAST of CX307912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307912 ID=CX307912; Name=CX307912; organism=Citrus clementina; type=EST; length=413bpback to top |