CX307914
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 6.101e-45 Identity = 79/96 (82.29%), Postives = 87/96 (90.62%), Query Frame = 3 Query: 135 SKHAVDNPDEIA----SMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 ++HAV NPDE+A ++ EMS RN TERRKLGYF+CGTGNPIDDCWRCD NWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDD+PVNP+PG Sbjct: 41 NQHAVTNPDEVADEVLALTEMSVRNHTERRKLGYFTCGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPG 136
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 3.028e-44 Identity = 90/163 (55.21%), Postives = 113/163 (69.33%), Query Frame = 3 Query: 3 LMLFVSVLASVRNEQDVSVSRKMKAE---SSMNSTMAAKAEVVAEALS-------------------KHAV-DNPD----EIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 +++ +++ A + ++S+SRK+K E SS +STMAA ++ E +HAV D+PD E+A +V+MS +N T RRKLG+FSCGTGNPIDDCWRCD NWHKNRKRLADCGIGFGRNAIGGRDGRFY+VTDP D+D VNPKPG Sbjct: 15 VLVVLALTAMIFRNSEISLSRKLKTEVIQSSNSSTMAAIRKLKTEEFQSLNSSTMAATRLDGEPQQQQHAVADDPDMVADEVAKLVQMSEQNRTARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPG 177
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 9.741e-43 Identity = 76/95 (80.00%), Postives = 82/95 (86.32%), Query Frame = 3 Query: 126 EALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 E +HAV+NPDE+A+MV+MS RNSTERR+LGYFSC TGNPIDDCWRCD W RKRLADC IGFGRNAIGGRDGRFYVVTDP DDDPVNP PG Sbjct: 29 ETWHEHAVENPDEVAAMVDMSIRNSTERRRLGYFSCATGNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPG 123
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 3.702e-42 Identity = 76/114 (66.67%), Postives = 91/114 (79.82%), Query Frame = 3 Query: 69 MKAESSMNSTMAAKAEVVAEALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 + + SS NS+ A K A ++HAV NP+E+A+MV+M +NSTERR+LG+FSC TGNPIDDCWRCD NWH RKRLA+C IGFGRNAIGGRDGR+YVVTDP D D VNP+PG Sbjct: 34 LNSHSSSNSSTANKLPNDDGAWNEHAVKNPEEVAAMVDMKIKNSTERRRLGFFSCATGNPIDDCWRCDRNWHLRRKRLANCAIGFGRNAIGGRDGRYYVVTDPSDHDAVNPRPG 147
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.031e-40 Identity = 70/95 (73.68%), Postives = 81/95 (85.26%), Query Frame = 3 Query: 126 EALSKHAVDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 E +HAV+NP+E+A+MV+MS RNST RR+LGYFSC TGNPIDDCWRCD W RK LA+C IGFGRNAIGGRDGR+YVV+DP DD+PVNPKPG Sbjct: 30 ETWHEHAVENPEEVAAMVDMSIRNSTARRRLGYFSCSTGNPIDDCWRCDRRWQSRRKHLANCAIGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPG 124
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.933e-39 Identity = 70/92 (76.09%), Postives = 80/92 (86.96%), Query Frame = 3 Query: 138 KHAVDNPDEIASMVEMSTRNSTERRKLGYFS-CGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 +HAV +P+EIA+MV+MS RNST RRKLG+FS C TGNPIDDCWRCD WH+ RKRLADC IGFGRNA+GGRDGR+Y+VTDP D DPV PKPG Sbjct: 34 EHAVKDPEEIAAMVDMSIRNSTYRRKLGFFSSCSTGNPIDDCWRCDKKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPG 125
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.531e-38 Identity = 78/145 (53.79%), Postives = 101/145 (69.66%), Query Frame = 3 Query: 3 LMLFVSVLASVRN--EQDVSVSRKMKAESSMN---STMAAKAEVVAEALSKHAVDNPD----EIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 L +FV + + N ++S SRK+K E S + S M + + V E L++HAV +PD E+++++ MS +N T RRKLG+FSCG GN IDDCWRCD NW+KNRK LADCG+GFG A GGR+G +YVVTD DDD VNPKPG Sbjct: 16 LFIFVGCVLTATNLRNNEISRSRKLKTEDSKSFNSSPMTTRLDGVVE-LNEHAVTDPDKVAHEVSNLIHMSEQNITARRKLGFFSCGNGNLIDDCWRCDRNWNKNRKHLADCGMGFGSKAFGGRNGSYYVVTDHSDDDVVNPKPG 159
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.841e-34 Identity = 61/88 (69.32%), Postives = 70/88 (79.55%), Query Frame = 3 Query: 147 VDNPDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 V +P+ + V S RRKLG+FSCG+GNPIDDCWRCD +W KNRKRLADCGIGFG+NAIGGRDG YVVTDP +DDPVNP+PG Sbjct: 50 VSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPG 137
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL_ZINEL (Pectate lyase OS=Zinnia elegans PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.245e-30 Identity = 59/85 (69.41%), Postives = 65/85 (76.47%), Query Frame = 3 Query: 156 PDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 P I + V S S RR LGY SCGTGNPIDDCWRCD NW NR+RLADC IGFG+NA+GGR+GR YVVTDP +DDPVNP PG Sbjct: 26 PHAIVNEVHKSINAS--RRNLGYLSCGTGNPIDDCWRCDPNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPG 108
BLAST of CX307914 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 2.751e-29 Identity = 57/89 (64.04%), Postives = 68/89 (76.40%), Query Frame = 3 Query: 147 VDNPDEIASMVEMSTRNSTE-RRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPG 410 V +P+ + V S S RRKLGY SC TGNPIDDCWRCD +W ++R+RLADC IGFG+NAIGGRDGR YVVTD +D+PV+PKPG Sbjct: 27 VPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPG 115 The following BLAST results are available for this feature:
BLAST of CX307914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307914 ID=CX307914; Name=CX307914; organism=Citrus clementina; type=EST; length=412bpback to top |