CX307917

Overview
NameCX307917
Unique NameCX307917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length380
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307917 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 1.198e-40
Identity = 82/126 (65.08%), Postives = 93/126 (73.81%), Query Frame = 1
Query:    1 QYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 378
            QYIA EF DKG  L   GK +A + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADI
Sbjct:   73 QYIAHEFSDKGNNLLSTGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADI 198          
BLAST of CX307917 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 5.034e-39
Identity = 82/127 (64.57%), Postives = 93/127 (73.23%), Query Frame = 1
Query:    1 QYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 378
            QYIA  + DKG QL   G K IA + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADI
Sbjct:   73 QYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADI 199          
BLAST of CX307917 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.575e-39
Identity = 80/127 (62.99%), Postives = 93/127 (73.23%), Query Frame = 1
Query:    1 QYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 378
            QYIA  + DKG QL     K +A + VW EVE+ +FDP +SKL +E+V KPM GM TD AAV ENE KL K+LDVYE+RL  SKYL  DSFTL DLHH P +N L+GT VK LFD+RPHVSAW ADI
Sbjct:   72 QYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRPHVSAWCADI 198          
BLAST of CX307917 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 8.037e-37
Identity = 73/127 (57.48%), Postives = 96/127 (75.59%), Query Frame = 1
Query:    1 QYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 378
            QYIA  + D G QL     K +  + VW EVE  +F+PP++KL WEL  KP+ GMTTD AAV+E+EA+L+K+LD+YE +L++SKYL  DSFTLVDLHH+PNI  L+ + VK++FD+RP VSAW ADI
Sbjct:   72 QYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRPRVSAWCADI 198          
BLAST of CX307917 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.989e-36
Identity = 73/127 (57.48%), Postives = 93/127 (73.23%), Query Frame = 1
Query:    1 QYIAQEFPDKGTQLTCPGKPIAPLL-VWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 378
            QYIA  + D G QL        P++ VW EVE  +F+P +SKL WEL  KP+ GMTTD  AV+E+E +L+K+LD+YE RL++SKYL  DSFTLVDLHH+PNI  L+ T VK++FD+RP VSAW ADI
Sbjct:   72 QYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRPRVSAWCADI 198          
BLAST of CX307917 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 2.585e-35
Identity = 80/130 (61.54%), Postives = 97/130 (74.62%), Query Frame = 1
Query:    1 QYIA--QEFPDKGTQLTCPGK-PIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYL-ACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 378
            +Y+A   +  ++GT L    K  +A  LVW+EVEA QFDP +SKL WELV+K +FGM TD   VEENEAKLAK+LDVYEARL++S+YL A DSFTLVDLHHLP +  L+GT VKKLF+ R HVSAW   I
Sbjct:   72 KYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKKLFEERAHVSAWCKKI 201          
BLAST of CX307917 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 2.189e-34
Identity = 76/128 (59.38%), Postives = 93/128 (72.66%), Query Frame = 1
Query:    1 QYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 378
            QY+A+E+ +KG +L      K  A   VW +VE  QFDP +SKL +E V+K MFGMTTDPAAV+E E KL K+LDVYEARL++S++LA DSFTL DLHHLP I+ LLGT  K LFD+RP VS W   I
Sbjct:  121 QYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKVLFDSRPKVSEWIKKI 248          
BLAST of CX307917 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.785e-32
Identity = 72/130 (55.38%), Postives = 88/130 (67.69%), Query Frame = 1
Query:    1 QYIAQEFPDKGTQLT-CPGKPIAPLLVWK---EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 378
            QYIA  + ++GT L     K IA   +     +VEA QFDP +SKL WE V+K  +G+ TD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+I
Sbjct:   73 QYIAHRYENQGTNLLPADSKNIAQYAIMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKKLFTERPRVNEWVAEI 202          
BLAST of CX307917 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 5.046e-31
Identity = 70/130 (53.85%), Postives = 90/130 (69.23%), Query Frame = 1
Query:    1 QYIAQEFPDKGTQLT-CPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADI 378
            QYIA  + ++GT L     K I   A + +  +VE  QFDP +SKL +E ++K ++G+TTD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+I
Sbjct:   73 QYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKKLFTERPRVNEWVAEI 202          
BLAST of CX307917 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 94.7449 bits (234), Expect = 1.523e-19
Identity = 53/123 (43.09%), Postives = 73/123 (59.35%), Query Frame = 1
Query:    1 QYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK-LFDARPHVSAW 366
            +YIA ++  +GT L       A L VW EVE+  F P +S L ++L+ +P+ G   D A VE++  +LAK+LDVYEA L+++KYLA D FTL D +H     L    P +     ARPHV AW
Sbjct:   73 RYIASKYASEGTDLLPATASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAW 195          
The following BLAST results are available for this feature:
BLAST of CX307917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF1_ARATH1.198e-4065.08Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GST11_ARATH5.034e-3964.57Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF_HYOMU6.575e-3962.99Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF1_TOBAC8.037e-3757.48Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF2_TOBAC3.989e-3657.48Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF_SILCU2.585e-3561.54Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF6_ARATH2.189e-3459.38Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GST16_ARATH7.785e-3255.38Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF4_ARATH5.046e-3153.85Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF3_MAIZE1.523e-1943.09Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]

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Properties
Property NameValue
Genbank descriptionC20003F02SK OF2 Citrus clementina cDNA clone C20003F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307917 ID=CX307917; Name=CX307917; organism=Citrus clementina; type=EST; length=380bp
CAATACATCGCCCAGGAGTTTCCAGACAAAGGCACCCAGTTAACATGCCC
AGGCAAGCCCATCGCCCCGTTATTGGTATGGAAGGAGGTGGAGGCACTCC
AGTTCGACCCCCCATCATCGAAGCTCAACTGGGAGCTCGTGTACAAGCCA
ATGTTTGGAATGACCACTGATCCAGCTGCGGTTGAAGAAAATGAAGCTAA
GCTTGCCAAAATTTTAGATGTTTACGAGGCCCGTTTGTCTCAGTCCAAAT
ACTTGGCGTGCGACAGCTTCACCTTGGTCGATTTGCATCATCTCCCCAAT
ATTAATTTGTTGTTGGGGACGCCTGTCAAGAAGCTGTTTGATGCACGCCC
CCATGTTAGCGCATGGGCAGCTGATATCAC
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