CX307925

Overview
NameCX307925
Unique NameCX307925
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length399
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307925 vs. ExPASy Swiss-Prot
Match: TXLNA_MOUSE (Alpha-taxilin OS=Mus musculus GN=Txlna PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.311e-19
Identity = 52/142 (36.62%), Postives = 88/142 (61.97%), Query Frame = 1
Query:    4 LKQLADQYALTEQQYAQKLKQKTLELQIAELKIKQHEEKLVQEQSQMK----------LYAEQVSQLLAT-EKNLRLQLTADGEKFQQFQDALVKSNEVFETFKQEIEKMAKSIKELKKENAFLKSKCEKSDFTLIELVEER 396
            LK+L +QY L E+   +  K K L+ Q+ + K++Q +E L + + + +          + ++++ +L+   E +L+ QL    EKF++FQ+ L KS+EVF TFKQE+EKM K IK+L+KE    +S+ E S+  L+E+ EE+
Sbjct:  309 LKKLIEQYELREEHIDKVFKHKDLQQQLVDAKLQQAQEMLKEAEERHQREKEFLLKEAVESQRMCELMKQQETHLKQQLALYTEKFEEFQNTLSKSSEVFTTFKQEMEKMTKKIKKLEKETTMYRSRWESSNKALLEMAEEK 450          
BLAST of CX307925 vs. ExPASy Swiss-Prot
Match: TXLNA_HUMAN (Alpha-taxilin OS=Homo sapiens GN=TXLNA PE=1 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 4.311e-19
Identity = 52/142 (36.62%), Postives = 88/142 (61.97%), Query Frame = 1
Query:    4 LKQLADQYALTEQQYAQKLKQKTLELQIAELKIKQHEEKLVQEQSQMK----------LYAEQVSQLLAT-EKNLRLQLTADGEKFQQFQDALVKSNEVFETFKQEIEKMAKSIKELKKENAFLKSKCEKSDFTLIELVEER 396
            LK+L +QY L E+   +  K K L+ Q+ + K++Q +E L + + + +          + ++++ +L+   E +L+ QL    EKF++FQ+ L KS+EVF TFKQE+EKM K IK+L+KE    +S+ E S+  L+E+ EE+
Sbjct:  309 LKKLIEQYELREEHIDKVFKHKDLQQQLVDAKLQQAQEMLKEAEERHQREKDFLLKEAVESQRMCELMKQQETHLKQQLALYTEKFEEFQNTLSKSSEVFTTFKQEMEKMTKKIKKLEKETTMYRSRWESSNKALLEMAEEK 450          
BLAST of CX307925 vs. ExPASy Swiss-Prot
Match: TXLNB_CHICK (Beta-taxilin OS=Gallus gallus GN=TXLNB PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.638e-18
Identity = 49/142 (34.51%), Postives = 82/142 (57.75%), Query Frame = 1
Query:    4 LKQLADQYALTEQQYAQKLKQKTLELQIAELKIKQHEEKLVQEQSQMKLYAE-----------QVSQLLATEKNLRLQLTADGEKFQQFQDALVKSNEVFETFKQEIEKMAKSIKELKKENAFLKSKCEKSDFTLIELVEER 396
            LK + DQY L E+   +  K + L+ ++ + K++Q +E + + + + +   E           Q   L   E  L+ Q+T   E+F++FQ  L KSNEVF TFKQE+EKM K +K+L+K+ A  KS+ E  +  L++++EE+
Sbjct:  280 LKSIIDQYELREEHLDKIFKHRELQQKLVDAKLEQSQEMMKEAEERHQKEKEYLLNQAAEWKLQAKMLKEQETVLQAQITLYSERFEEFQKTLTKSNEVFATFKQEMEKMTKKMKKLEKDTATWKSRFENCNRALLDMIEEK 421          
BLAST of CX307925 vs. ExPASy Swiss-Prot
Match: TXLNG_MOUSE (Gamma-taxilin OS=Mus musculus GN=Txlng PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.131e-18
Identity = 51/145 (35.17%), Postives = 85/145 (58.62%), Query Frame = 1
Query:    4 LKQLADQYALTEQQYAQKLKQKTLELQIAELKIKQ--------------HEEKLVQEQSQMKLYAEQVSQLLATEKNLRLQLTADGEKFQQFQDALVKSNEVFETFKQEIEKMAKSIKELKKENAFLKSKCEKSDFTLIELVEER 396
            LK+L +QYAL E+   +  K K L+ Q+ + K++Q                E L++E ++ +   EQ+ Q    E  L+ QL+   +KF++FQ  + KSNE+F TF+QE+EKM K IK+L+KE    ++K E ++  L+++ EE+
Sbjct:  276 LKKLIEQYALREEHIDKVFKHKELQQQLVDAKLQQTTQLIKEADEKHQREREFLLKEATESRHKYEQMKQ---QEVQLKQQLSLYMDKFEEFQTTMAKSNELFTTFRQEMEKMTKKIKKLEKETIIWRTKWENNNKALLQMAEEK 417          
BLAST of CX307925 vs. ExPASy Swiss-Prot
Match: TXLNG_HUMAN (Gamma-taxilin OS=Homo sapiens GN=TXLNG PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 8.131e-18
Identity = 51/145 (35.17%), Postives = 85/145 (58.62%), Query Frame = 1
Query:    4 LKQLADQYALTEQQYAQKLKQKTLELQIAELKIKQ--------------HEEKLVQEQSQMKLYAEQVSQLLATEKNLRLQLTADGEKFQQFQDALVKSNEVFETFKQEIEKMAKSIKELKKENAFLKSKCEKSDFTLIELVEER 396
            LK+L +QYAL E+   +  K K L+ Q+ + K++Q                E L++E ++ +   EQ+ Q    E  L+ QL+   +KF++FQ  + KSNE+F TF+QE+EKM K IK+L+KE    ++K E ++  L+++ EE+
Sbjct:  276 LKKLIEQYALREEHIDKVFKHKELQQQLVDAKLQQTTQLIKEADEKHQREREFLLKEATESRHKYEQMKQ---QEVQLKQQLSLYMDKFEEFQTTMAKSNELFTTFRQEMEKMTKKIKKLEKETIIWRTKWENNNKALLQMAEEK 417          
BLAST of CX307925 vs. ExPASy Swiss-Prot
Match: TXLNB_HUMAN (Beta-taxilin OS=Homo sapiens GN=TXLNB PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 8.990e-17
Identity = 47/142 (33.10%), Postives = 80/142 (56.34%), Query Frame = 1
Query:    4 LKQLADQYALTEQQYAQKLKQKTLELQIAELKIKQHEEKLVQEQSQMKLYAE-----------QVSQLLATEKNLRLQLTADGEKFQQFQDALVKSNEVFETFKQEIEKMAKSIKELKKENAFLKSKCEKSDFTLIELVEER 396
            LK + DQY L E+   +  K + L+ ++ + K++Q +E + + + + K   E           Q   L   E  L+ QLT    +F++FQ  L KSNEVF TFKQE++K  K +K+L+K+ A  K++ E  +  L++++EE+
Sbjct:  282 LKSIIDQYELREEHLDKIFKHRELQQKLVDAKLEQAQEMMKEAEERHKREKEYLLNQAAEWKLQAKVLKEQETVLQAQLTLYSGRFEEFQSTLTKSNEVFATFKQEMDKTTKKMKKLEKDTATWKARFENCNKALLDMIEEK 423          
BLAST of CX307925 vs. ExPASy Swiss-Prot
Match: TXLNB_MOUSE (Beta-taxilin OS=Mus musculus GN=Txlnb PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 5.827e-16
Identity = 45/142 (31.69%), Postives = 80/142 (56.34%), Query Frame = 1
Query:    4 LKQLADQYALTEQQYAQKLKQKTLELQIAELKIKQHEEKLVQEQSQMKLYAE-----------QVSQLLATEKNLRLQLTADGEKFQQFQDALVKSNEVFETFKQEIEKMAKSIKELKKENAFLKSKCEKSDFTLIELVEER 396
            LK + DQY L E+   +  K + L+ ++ + K+++ +E + + + + +   E           Q   L   E  L+ QLT    +F++FQ  L KSNEVF TFKQE++K  K +K+L+K+ A  K++ E  +  L++++EE+
Sbjct:  285 LKSIIDQYELREEHLDKIFKHRELQQKLVDAKLEEAQELMQEAEERHRREKEYLLNQAAEWKLQAKVLKEQETVLQAQLTLYSGRFEEFQSTLTKSNEVFATFKQEMDKTTKKMKKLEKDTATWKARFENCNKALLDMIEEK 426          
The following BLAST results are available for this feature:
BLAST of CX307925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TXLNA_MOUSE4.311e-1936.62Alpha-taxilin OS=Mus musculus GN=Txlna PE=2 SV=1[more]
TXLNA_HUMAN4.311e-1936.62Alpha-taxilin OS=Homo sapiens GN=TXLNA PE=1 SV=3[more]
TXLNB_CHICK1.638e-1834.51Beta-taxilin OS=Gallus gallus GN=TXLNB PE=2 SV=1[more]
TXLNG_MOUSE8.131e-1835.17Gamma-taxilin OS=Mus musculus GN=Txlng PE=2 SV=1[more]
TXLNG_HUMAN8.131e-1835.17Gamma-taxilin OS=Homo sapiens GN=TXLNG PE=1 SV=2[more]
TXLNB_HUMAN8.990e-1733.10Beta-taxilin OS=Homo sapiens GN=TXLNB PE=1 SV=3[more]
TXLNB_MOUSE5.827e-1631.69Beta-taxilin OS=Mus musculus GN=Txlnb PE=2 SV=2[more]
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Properties
Property NameValue
Genbank descriptionC20003F12SK OF2 Citrus clementina cDNA clone C20003F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307925 ID=CX307925; Name=CX307925; organism=Citrus clementina; type=EST; length=399bp
AATCTGAAGCAGCTAGCTGATCAGTATGCCCTTACTGAACAACAATATGC
ACAGAAGTTAAAGCAAAAAACACTGGAACTTCAGATTGCTGAATTGAAAA
TTAAGCAACATGAGGAGAAATTAGTTCAGGAACAGTCCCAAATGAAATTG
TATGCCGAACAAGTGTCACAATTACTGGCTACCGAAAAGAATTTGCGCTT
GCAGTTGACGGCTGATGGCGAAAAGTTCCAACAATTCCAGGATGCATTGG
TAAAGAGCAATGAGGTCTTTGAAACATTTAAGCAAGAGATTGAGAAGATG
GCAAAATCAATCAAGGAGCTCAAGAAGGAAAACGCGTTCTTGAAGAGCAA
ATGTGAAAAATCAGATTTTACCCTTATAGAACTTGTTGAGGAGCGTGAA
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