CX307947

Overview
NameCX307947
Unique NameCX307947
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length439
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307947 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.390e-13
Identity = 46/135 (34.07%), Postives = 67/135 (49.63%), Query Frame = 2
Query:   47 TMGTEVVMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLQSAVRDILAETDKYXXXXXSALEKIV 439
            T     V V+ + FPP++    ++K L L G G+  IEI    IKFTAIGVYL+   +  L  +WKGK    L +  +FF  +V+ P+EKF R+  I  + G QY  ++             Y      A+EK +
Sbjct:    5 TKSVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFI 139          
BLAST of CX307947 vs. ExPASy Swiss-Prot
Match: CFI3_SOYBN (Chalcone--flavonone isomerase 3 OS=Glycine max GN=CHI3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.898e-13
Identity = 43/129 (33.33%), Postives = 64/129 (49.61%), Query Frame = 2
Query:   65 VMVDEIPFPPQITTTKPLN---LLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLQSAVRDILAETDKYXXXXXSALEKIV 439
            V V+ + FPP +      N   L G G+  ++IH   +KFTAI VYL  + LS L  +WK K    L + D FF  +V+ P EKF ++ +IK + G QY  ++      I      Y      A++K +
Sbjct:    9 VTVENVTFPPTVKPPCSPNTFFLAGAGVRGLQIHHAFVKFTAICVYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFL 137          
BLAST of CX307947 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 9.009e-13
Identity = 45/129 (34.88%), Postives = 62/129 (48.06%), Query Frame = 2
Query:   65 VMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLQSAVRDILAETDKYXXXXXSALEKIV 439
            V ++   FPP +    T+KP  L G G   +EI    IKFTAIGVYL+   +  L  +WKGK    L    DFF  +VS P EKF ++ +I  + G QY  ++             Y      A+EK +
Sbjct:   12 VQIESHVFPPTVKPPGTSKPFFLGGAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFI 140          
BLAST of CX307947 vs. ExPASy Swiss-Prot
Match: CFI2A_SOYBN (Chalcone--flavonone isomerase 2-A OS=Glycine max GN=CHI2-A PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.009e-13
Identity = 42/129 (32.56%), Postives = 64/129 (49.61%), Query Frame = 2
Query:   65 VMVDEIPFPPQITTTKPLN---LLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLQSAVRDILAETDKYXXXXXSALEKIV 439
            V V+ + FPP +      N   L G G+  ++IH   +KFTAI +YL  + LS L  +WK K    L + D FF  +V+ P EKF ++ +IK + G QY  ++      I      Y      A++K +
Sbjct:    9 VTVENVTFPPTVKPPCSPNTFFLAGAGVRGLQIHHAFVKFTAICIYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFL 137          
BLAST of CX307947 vs. ExPASy Swiss-Prot
Match: CFI_EUSGR (Chalcone--flavonone isomerase OS=Eustoma grandiflorum GN=CHI PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.177e-12
Identity = 45/129 (34.88%), Postives = 64/129 (49.61%), Query Frame = 2
Query:   65 VMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLQSAVRDILAETDKYXXXXXSALEKIV 439
            V V+   FPP IT   +TK   L G G+  +EI    +KFTAIG+YLD   +  L  +WKGK    LA   DFF  +++ P EKF ++ +I  + G QY  ++             Y      A+EK +
Sbjct:   10 VQVESYLFPPTITPPASTKSFLLGGAGVRGLEIGGNFVKFTAIGIYLDETAIPWLAGKWKGKTAEELADSVDFFADIITGPFEKFTQVTLILPLTGQQYSGKVSENCTAQWKAAGVYTPADGKAIEKFL 138          
BLAST of CX307947 vs. ExPASy Swiss-Prot
Match: CFI_VERHY (Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.423e-12
Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 2
Query:   65 VMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFFRIVVIKEIKGSQY 349
            V V+ + FPP +    + K   L G G+  +EI    IKFTAIGVYL+ + ++ L  +WKGK    +A   DFF  +V+ P EKF ++  I  + G QY
Sbjct:   10 VQVESVVFPPAVKPPGSDKTFFLGGAGVRGLEIEGKFIKFTAIGVYLENDAVTSLAAKWKGKTAEEVADSGDFFAEIVTGPFEKFTKVTTILPLTGQQY 108          
BLAST of CX307947 vs. ExPASy Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.839e-12
Identity = 43/127 (33.86%), Postives = 65/127 (51.18%), Query Frame = 2
Query:   65 VMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHL-QQWKGKQGSSLAQDDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLQSAVRDILAETDKYXXXXXSALEK 433
            +++ E+ FPP      ++  L L G G   +EI    + FTAIGVYL+   +S L  +WKGK    LA + DFF  + + P EKF RI ++K + G QY  +++            Y     +A+EK
Sbjct:   11 LVIGEVTFPPAAAPPGSSSSLFLAGAGERGLEIDRQFVVFTAIGVYLEDLAVSTLGPKWKGKTADDLAGNSDFFRDIFTGPFEKFTRITMVKPLSGQQYSEKVEENCVAHWKAAGTYTEAEAAAVEK 137          
BLAST of CX307947 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 7.626e-12
Identity = 44/138 (31.88%), Postives = 67/138 (48.55%), Query Frame = 2
Query:   38 LKITMGTEVVMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLQSAVRDILAETDKYXXXXXSALEKIV 439
            +  ++    + V+   FPP +    +TK L L G G   +EI    IKFTAIGVYL+   ++ L  +WKGK    L +  +FF  +V+   EKF R+ +I  + G QY  ++      I      Y      A+EK +
Sbjct:    1 MSTSLSVTELQVENFTFPPTVKPPGSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFI 138          
BLAST of CX307947 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 7.626e-12
Identity = 44/127 (34.65%), Postives = 62/127 (48.82%), Query Frame = 2
Query:   65 VMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLQSAVRDILAETDKYXXXXXSALEK 433
            V V+ + FPP +    +T  L L G G+  +EI    +KFTAIGVYL+   +  L  +WKGK    LA   DFF  +V+ P EKF ++  I  + G QY  ++             Y      A+EK
Sbjct:   10 VQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEK 136          
BLAST of CX307947 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.960e-12
Identity = 44/127 (34.65%), Postives = 62/127 (48.82%), Query Frame = 2
Query:   65 VMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLQSAVRDILAETDKYXXXXXSALEK 433
            V V+ + FPP +    +T  L L G G+  +EI    +KFTAIGVYL+   +  L  +WKGK    LA   DFF  +V+ P EKF ++  I  + G QY  ++             Y      A+EK
Sbjct:   10 VQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEK 136          
The following BLAST results are available for this feature:
BLAST of CX307947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
CFI_ELAUM1.390e-1334.07Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI3_SOYBN6.898e-1333.33Chalcone--flavonone isomerase 3 OS=Glycine max GN=... [more]
CFI_CAMSI9.009e-1334.88Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI2A_SOYBN9.009e-1332.56Chalcone--flavonone isomerase 2-A OS=Glycine max G... [more]
CFI_EUSGR1.177e-1234.88Chalcone--flavonone isomerase OS=Eustoma grandiflo... [more]
CFI_VERHY3.423e-1239.39Chalcone--flavonone isomerase OS=Verbena hybrida G... [more]
CFI_CANGE5.839e-1233.86Chalcone--flavonone isomerase OS=Canna generalis G... [more]
CFI_GOSHI7.626e-1231.88Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI2_VITVI7.626e-1234.65Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI1_VITVI9.960e-1234.65Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]

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Properties
Property NameValue
Genbank descriptionC20004A07SK OF2 Citrus clementina cDNA clone C20004A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307947 ID=CX307947; Name=CX307947; organism=Citrus clementina; type=EST; length=439bp
TTTTCTCCCTACTTCATCATTTTCCAGTAGTTTCCCACTAAAGATTACCA
TGGGCACTGAAGTTGTAATGGTGGATGAAATCCCATTTCCTCCTCAGATC
ACCACCACCAAGCCGTTGAACCTTCTGGGTCATGGTTTAACAGACATTGA
GATACACTTTCTCCAAATCAAGTTCACGGCAATTGGAGTCTACTTGGATC
CTGAAATTTTGAGTCACTTGCAACAGTGGAAGGGCAAACAGGGAAGTTCC
CTTGCACAAGATGATGACTTCTTTGATGCTCTTGTCTCTGCTCCAGTAGA
GAAATTTTTTAGAATTGTTGTGATCAAGGAGATCAAGGGGTCACAATATG
GGGTTCAGTTACAAAGTGCGGTGAGGGACATATTGGCCGAAACTGACAAA
TATGAAGAAGAGGAAGAATCTGCCCTTGAGAAAATCGTT
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