CX307949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_CUPTR (Cytochrome c-type biogenesis protein ccmE OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=ccmE PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 7.885e-22 Identity = 62/158 (39.24%), Postives = 79/158 (50.00%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEK 519 + RRL A +C +VLN F+ LVF+ +PS+ Q P FRLGGLV GS+ + FVVTD + V+Y G LPDLFREG VV G ++ D F AT+VLAKHDE YMP E AAA+++ Sbjct: 4 RQRRLGLLAAALACCGVAAALVLNAFRANLVFFFSPSQVAA--QEAPVARSFRLGGLVASGSIRREGDGMTVRFVVTDTARQVPVQYRGLLPDLFREGKGVVARGQLR---------------------ADGTFVATEVLAKHDENYMPPEAAAALKQ 138
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_AZOSE (Cytochrome c-type biogenesis protein ccmE OS=Azoarcus sp. (strain EbN1) GN=ccmE PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.996e-21 Identity = 61/161 (37.89%), Postives = 83/161 (51.55%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEKNKK 528 +S+RL A + + G + +VLN FQ LVF+ TP+E E P FR+GG+V GS+ A ++F +TD I V Y GSLPDLF EG VV+G + P D F A++VLAKHDE YMP E A+++ +K Sbjct: 4 RSKRLLLVAGAVALLVGAVALVLNAFQQNLVFFHTPTEVAEG--KAPVGRAFRIGGMVETGSIRRAADGVTVQFAITDTAKVIPVSYKGSLPDLFSEGKGAVVQGTLGP---------------------DGQFQASEVLAKHDENYMPPEAQHAVDQAQK 141
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_NITEU (Cytochrome c-type biogenesis protein ccmE OS=Nitrosomonas europaea GN=ccmE PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 8.718e-21 Identity = 60/159 (37.74%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 52 RRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEKNKK 528 +++ AL+ S + +V+VLN FQ LVF+ +PS+ K P FR+GGLV EGS+ + + F +TD I V Y G LPDLF+EG VV +G + D F A +VLAKHDE YMP E A+A+E+ K Sbjct: 6 KKMAVIALSVSALTVAVVLVLNAFQSNLVFFFSPSQVAAK--EAPIGKSFRIGGLVEEGSLKREGDGTTLNFAITDTAEVIRVVYTGILPDLFKEGKGVVAQG---------------------KMADDGIFYADEVLAKHDENYMPPEAASALEQAAK 141
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_HALHL (Cytochrome c-type biogenesis protein ccmE OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ccmE PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.651e-20 Identity = 58/152 (38.16%), Postives = 83/152 (54.61%), Query Frame = 1 Query: 73 LTFSCIAGFIV---IVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEK 519 L +AG V +VLN F+D + F++TPSE + K S+ + FR+GGLV +GSV + S+++ F VTD + V + G LPDLFREG VVVEG I + + F A +V+A+HDE YMP E A+++ Sbjct: 10 LVLGVVAGVSVATALVLNAFRDNMTFFITPSEVMAK--SDMPERHFRIGGLVEDGSVERDSDSTQVRFRVTDTEASVPVDFEGILPDLFREGQGVVVEGRI---------------------TSNGVFKADNVMARHDEDYMPAEAQEALDR 138
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_AZOSB (Cytochrome c-type biogenesis protein ccmE OS=Azoarcus sp. (strain BH72) GN=ccmE PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.380e-20 Identity = 61/161 (37.89%), Postives = 80/161 (49.69%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEKNKK 528 +++RL + + +VL+ FQ LVF+ TPSE E P FR+GG+V GS+ A + FV+TD I V Y GSLPDLF+EG VV+G + D F AT+VLAKHDE YMP E A A+E+ K Sbjct: 4 RNKRLMLVGGGIALLVAAAALVLSAFQQNLVFFHTPSEVAEG--KAPVGKTFRVGGMVETGSIQRDADGVTVRFVITDTAKVIPVSYRGSLPDLFKEGKGAVVQGTL---------------------GADGQFRATEVLAKHDENYMPPEAAHALEQAHK 141
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_RALEJ (Cytochrome c-type biogenesis protein ccmE OS=Ralstonia eutropha (strain JMP134) GN=ccmE PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.639e-20 Identity = 57/158 (36.08%), Postives = 77/158 (48.73%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEK 519 + RRL +C + +VLN F+ LVF+ +PS+ P+ FRLGGLV GS+ + F+VTD ++ V Y G LPDLFREG VV G + R F A++VLAKHDE YMP E A A+++ Sbjct: 4 RQRRLGMLLAALACAGIALALVLNAFRSNLVFFFSPSQVAA--HEAPASRSFRLGGLVAPGSIRREGDGMTVRFIVTDKAREVPVVYRGLLPDLFREGKGVVARGTL---------------------DRSGTFVASEVLAKHDENYMPPEAADALKQ 138
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_ALHEH (Cytochrome c-type biogenesis protein ccmE OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=ccmE PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.639e-20 Identity = 61/156 (39.10%), Postives = 76/156 (48.72%), Query Frame = 1 Query: 52 RRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEK 519 RRL AL + + L FQD LVF+ TPSE + + P R+GGLV GSV A+S+ + F VTD I V Y G LPDLFREG VV +G + D F AT VLA+HDE YMP E A+++ Sbjct: 6 RRLTLIALVLGGLGLSAGLALTAFQDNLVFFFTPSEVMAR--EAPIDRPIRIGGLVKAGSVEREAASARVHFKVTDTAESITVSYDGILPDLFREGQGVVAQGRL---------------------GADGRFHATQVLARHDETYMPAEAKEALDR 138
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_RALEH (Cytochrome c-type biogenesis protein ccmE OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ccmE PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.259e-19 Identity = 58/156 (37.18%), Postives = 75/156 (48.08%), Query Frame = 1 Query: 52 RRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEK 519 RRL C+ +VLN F+ LVF+ +PS+ P FRLGGLV GS+ + F+VTD +LV Y G LPDLFREG VV G ++ D F A++VLAKHDE YMP E A A+++ Sbjct: 6 RRLGLLLAALICVGIATTLVLNAFRSNLVFFFSPSQVAA--HEAPVARSFRLGGLVAPGSIRREGDGMTIRFIVTDTARQVLVVYRGLLPDLFREGKGVVARGKLE---------------------ADGTFVASEVLAKHDENYMPPEAADALKQ 138
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_RHORT (Cytochrome c-type biogenesis protein ccmE OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=ccmE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.644e-19 Identity = 62/161 (38.51%), Postives = 81/161 (50.31%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEKNKK 528 + RRL+ L + + L FQD LVF+ +P++ EK +FR+GGLV EGSV + + F+VTDL+ + VRY G LPDLFREG VV EG A F A VLAKHDE YMP EVA +++ + K Sbjct: 4 KKRRLYFVVLGMLALFAAAGLTLTAFQDNLVFFYSPTDLQEK--GVDQGRRFRVGGLVEEGSVVRDGET--VRFIVTDLMNTVTVRYTGMLPDLFREGQGVVAEG---------------------AMDGAGTFVAASVLAKHDENYMPPEVAESLKASGK 139
BLAST of CX307949 vs. ExPASy Swiss-Prot
Match: CCME_RALPJ (Cytochrome c-type biogenesis protein ccmE OS=Ralstonia pickettii (strain 12J) GN=ccmE PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.248e-19 Identity = 57/158 (36.08%), Postives = 72/158 (45.57%), Query Frame = 1 Query: 46 QSRRLWTYALTFSCIAGFIVIVLNNFQDQLVFYVTPSEALEKYQSNPSKNKFRLGGLVLEGSVAHPASSSEMEFVVTDLVTDILVRYHGSLPDLFREGHSVVVEGFIKPITEEIKNVKSEKSVSENARSRDCFFSATDVLAKHDEKYMPQEVAAAIEK 519 + RRL C + LN F+ LVF+ +P++ K P FRLGGLV GS+ + F+VTD + V YHG LPDLFREG VV G + D F A +VLAKHDE YMP E A A+ + Sbjct: 4 RQRRLGILLAALVCAGAATALTLNAFRSNLVFFFSPTQIAAK--EAPVAQVFRLGGLVERGSIQRERDGMTIRFIVTDTARGVPVVYHGLLPDLFREGKGVVARGRL---------------------GEDGVFVANEVLAKHDENYMPPEAADALRR 138 The following BLAST results are available for this feature:
BLAST of CX307949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 247
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307949 ID=CX307949; Name=CX307949; organism=Citrus clementina; type=EST; length=530bpback to top |