CX308015

Overview
NameCX308015
Unique NameCX308015
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length530
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.519e-44
Identity = 89/176 (50.57%), Postives = 115/176 (65.34%), Query Frame = 3
Query:    6 IDYLDLYLMHWPVKMKKGSVGF---KPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSDVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPED 524
            +DY+DL L+HWP  +  GS  F   K E     D+   W+ ME  +  G ARAIGVSNFS KKL  LL  A V PA NQVE +P WQQ+ LRE C+ +GV L GYSPLG+ GT W  + V+   V++ +A+  GKT AQ+CLRW  + G+ LL K+ NE R+KENLD+FDW + E+
Sbjct:  111 MDYVDLLLVHWPATVAPGSYDFPFPKEEMAPAFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSFAVVRPAANQVEMNPMWQQRTLREVCRREGVQLCGYSPLGAKGTPWGSAAVMDSGVLHDIAQTKGKTLAQICLRWMYEQGDVLLVKTYNENRMKENLDIFDWELTEE 286          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 5.612e-44
Identity = 88/176 (50.00%), Postives = 118/176 (67.05%), Query Frame = 3
Query:    6 IDYLDLYLMHWPVKMKKGSVGFK-PENLDKP--DIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSDVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPED 524
            +DY+DL L+HWPV +  G+  F  P+ +  P  D+   W+ ME  +  G ARAIGVSNFS KKL  LL +A V PAVNQVE +P WQQ+ LRE C+ +GV L GYSPLG+ GT W  + V+   V+  +A   GKT AQ+CLRW  + G+ LL K+ NE R+KENLD+F+W + ++
Sbjct:  109 MDYVDLLLVHWPVSLTPGNYDFPFPKEVILPSFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSLAAVRPAVNQVEVNPMWQQRTLREVCRREGVQLCGYSPLGAKGTPWGSAAVMDSGVLQEIAGAKGKTLAQICLRWLYEQGDVLLVKTYNEKRMKENLDIFNWELTDE 284          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: ALDR_HORVU (Aldose reductase OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 4.916e-40
Identity = 81/176 (46.02%), Postives = 111/176 (63.07%), Query Frame = 3
Query:    3 QIDYLDLYLMHWPVKMKKGSVGFKPE--NLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSDVLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPED 524
            Q+DY+DLY +HWP ++K G+    PE   + + D+   WK ME L   G  + IGV N++  KL  LL  A +PPAV Q+E HP W+  K+ E CK  G+H++ YSPLGS      + ++   PVV  VA KL KTP QV ++W LQ G S++PKS+ + RIKEN+ VF W IPE+
Sbjct:  111 QLDYIDLYHIHWPFRLKDGA-HMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKNDKIFEACKKHGIHVTAYSPLGSS-----EKNLAHDPVVEKVANKLNKTPGQVLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEE 280          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: AK1A1_XENLA (Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.868e-39
Identity = 85/183 (46.45%), Postives = 116/183 (63.39%), Query Frame = 3
Query:    3 QIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSD---VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPED 524
            Q+DYLDLYLMHWP   K+G   F P+N       D  D   TWKAME L + G A+AIG+SNF+ +++ D+L +A V PAV QVECHP   Q +L   C+S G+ L+GYSPLGSP  +W K +   +L+ P +  +A+K   + AQ+ LRW +Q     +PKS    RI +NL VFD+S+ E+
Sbjct:  105 QLDYLDLYLMHWPYAFKRGDQVF-PQNPDGSVQYDLTDYKDTWKAMEKLVEKGLAKAIGLSNFNKRQMDDILSIATVKPAVLQVECHPYLAQNELIACCRSHGLVLTGYSPLGSPDRSWRKPEDPVLLEEPGIIAMAKKYNISEAQILLRWQVQRRVVTIPKSVTPARILQNLQVFDFSLSEE 286          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: AK1A1_XENTR (Alcohol dehydrogenase [NADP+] OS=Xenopus tropicalis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 9.271e-39
Identity = 82/183 (44.81%), Postives = 114/183 (62.30%), Query Frame = 3
Query:    3 QIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSD---VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPED 524
            Q+DYLDLYLMHWP   K+G   F P+N       D  D   TWKAME L   G  +AIG+SNF+ +++ D++ +A V PAV QVECHP   Q +L  +C + G+  +GYSPLGSP  +W K +   +L+ P +  +A+K GK+ AQ+ LRW +Q     +PKS    RI +N  VFD+S+ E+
Sbjct:  105 QLDYLDLYLMHWPYAFKRGDQIF-PQNPDGSVQYDLTDYKDTWKAMEKLVKQGLTKAIGLSNFNKRQIDDIISIATVKPAVLQVECHPYLAQNELIAYCHAHGLVFTGYSPLGSPDRSWRKPEDPVLLEEPGIIAMAKKYGKSEAQILLRWQVQRKVVSIPKSVTPTRILQNFQVFDFSLSEE 286          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 9.271e-39
Identity = 84/183 (45.90%), Postives = 115/183 (62.84%), Query Frame = 3
Query:    3 QIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSD---VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSIPED 524
            ++DYLDLYLMHWP   ++G   F P+N       D  D   TWKAME L + G A+AIG+SNF+++++ D+L VA V PAV QVECHP   Q +L   C+ +G+ ++ YSPLGSP   W   D   +L+ P +  +AEK  K+PAQ+ LRW  Q     +PKS    RI +NL VFD+S+ E+
Sbjct:  105 KLDYLDLYLMHWPHAFERGDNLF-PKNPDGTMRYDYTDYKDTWKAMEKLVEKGLAKAIGLSNFNSRQIDDVLSVATVKPAVLQVECHPYLAQNELIAHCQKRGLVVTAYSPLGSPDRMWKHPDEPVLLEEPGIKKLAEKYKKSPAQILLRWQAQRKVVTIPKSVTPARILQNLQVFDFSLTEE 286          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: AK1A1_BOVIN (Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.339e-37
Identity = 82/185 (44.32%), Postives = 117/185 (63.24%), Query Frame = 3
Query:    3 QIDYLDLYLMHWPVKMKKGSVGFKPENLD------KPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSD---VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSI-PEDL 527
            Q++YLDLYLMHWP   ++G   F P+N D            TW+A+EAL   G  RA+G+SNF+++++ D+L VA V PAV QVECHP   Q +L   C+++ + ++ YSPLGS    W   +   +LK PVV  +AEK G++PAQ+ LRW +Q   S +PKS    RI EN+ VFD++  PE++
Sbjct:  103 QLEYLDLYLMHWPYAFERGDSPF-PKNADGTIRYDSTHYKETWRALEALVAKGLVRALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQARNLEVTAYSPLGSSDRAWRDPEEPVLLKEPVVLALAEKHGRSPAQILLRWQVQRKVSCIPKSVTPSRILENIQVFDFTFSPEEM 286          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: AK1A1_RAT (Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus GN=Akr1a1 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 2.284e-37
Identity = 82/185 (44.32%), Postives = 117/185 (63.24%), Query Frame = 3
Query:    3 QIDYLDLYLMHWPVKMKKGSVGFKPENLD------KPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSD---VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSI-PEDL 527
            Q++YLDLYLMHWP   ++G   F P+N D            TWKA+EAL   G  +A+G+SNFS++++ D+L VA V PAV QVECHP   Q +L   C+++G+ ++ YSPLGS    W   D   +L+ PVV  +AEK G++PAQ+ LRW +Q     +PKS    RI +N+ VFD++  PE++
Sbjct:  103 QLEYLDLYLMHWPYAFERGDNPF-PKNADGTVKYDSTHYKETWKALEALVAKGLVKALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRHPDEPVLLEEPVVLALAEKHGRSPAQILLRWQVQRKVICIPKSITPSRILQNIQVFDFTFSPEEM 286          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 3.895e-37
Identity = 81/185 (43.78%), Postives = 116/185 (62.70%), Query Frame = 3
Query:    3 QIDYLDLYLMHWPVKMKKGSVGFKPENLD------KPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSD---VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSI-PEDL 527
            Q++YLDLYLMHWP   ++G   F P+N D            TWKA+EAL   G  RA+G+SNFS++++ D+L VA V PAV QVECHP   Q +L   C+++G+ ++ YSPLGS    W   +   +L+ PVV  +AEK  ++PAQ+ LRW +Q     +PKS    RI +N+ VFD++  PE++
Sbjct:  103 QLEYLDLYLMHWPYAFERGDNPF-PKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRDPNEPVLLEEPVVQALAEKYNRSPAQILLRWQVQRKVICIPKSVTPSRIPQNIQVFDFTFSPEEM 286          
BLAST of CX308015 vs. ExPASy Swiss-Prot
Match: AK1A1_HUMAN (Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=AKR1A1 PE=1 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 3.895e-37
Identity = 81/185 (43.78%), Postives = 117/185 (63.24%), Query Frame = 3
Query:    3 QIDYLDLYLMHWPVKMKKGSVGFKPENLD------KPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVACVPPAVNQVECHPSWQQQKLREFCKSKGVHLSGYSPLGSPGTTWIKSD---VLKHPVVNMVAEKLGKTPAQVCLRWGLQMGNSLLPKSTNEVRIKENLDVFDWSI-PEDL 527
            Q++YLDLYLMHWP   ++G   F P+N D            TWKA+EAL   G  +A+G+SNF+++++ D+L VA V PAV QVECHP   Q +L   C+++G+ ++ YSPLGS    W   D   +L+ PVV  +AEK G++PAQ+ LRW +Q     +PKS    RI +N+ VFD++  PE++
Sbjct:  103 QLEYLDLYLMHWPYAFERGDNPF-PKNADGTICYDSTHYKETWKALEALVAKGLVQALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRDPDEPVLLEEPVVLALAEKYGRSPAQILLRWQVQRKVICIPKSITPSRILQNIKVFDFTFSPEEM 286          
The following BLAST results are available for this feature:
BLAST of CX308015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
NADO2_ORYSJ2.519e-4450.57Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
NADO1_ORYSJ5.612e-4450.00Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]
ALDR_HORVU4.916e-4046.02Aldose reductase OS=Hordeum vulgare PE=1 SV=1[more]
AK1A1_XENLA1.868e-3946.45Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN... [more]
AK1A1_XENTR9.271e-3944.81Alcohol dehydrogenase [NADP+] OS=Xenopus tropicali... [more]
AK1A1_CHICK9.271e-3945.90Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]
AK1A1_BOVIN1.339e-3744.32Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR... [more]
AK1A1_RAT2.284e-3744.32Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus... [more]
AK1A1_PIG3.895e-3743.78Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]
AK1A1_HUMAN3.895e-3743.78Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=A... [more]

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Properties
Property NameValue
Genbank descriptionC20005A10SK OF2 Citrus clementina cDNA clone C20005A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308015 ID=CX308015; Name=CX308015; organism=Citrus clementina; type=EST; length=530bp
TACAGATTGACTACCTTGATCTATACCTTATGCACTGGCCAGTTAAGATG
AAGAAGGGGTCTGTTGGCTTCAAGCCAGAAAACCTTGATAAACCAGATAT
ACCTAGCACGTGGAAAGCAATGGAGGCACTTTATGACTCTGGCAAGGCTC
GAGCGATCGGAGTAAGCAATTTTTCTACAAAGAAGCTTGGAGATTTGTTG
GAAGTGGCATGTGTGCCTCCTGCTGTTAACCAAGTGGAATGCCATCCTTC
ATGGCAGCAGCAAAAGCTTCGTGAATTCTGTAAATCCAAGGGAGTTCACC
TATCTGGGTATTCCCCATTGGGTTCTCCTGGCACAACATGGATCAAGAGT
GATGTCCTCAAGCATCCAGTTGTGAATATGGTTGCTGAGAAATTAGGCAA
AACTCCCGCACAAGTTTGTCTCCGCTGGGGTCTGCAAATGGGTAACAGTT
TGCTTCCCAAGAGCACAAATGAAGTACGGATCAAGGAGAACTTGGATGTC
TTTGACTGGTCCATACCTGAGGACTTACTA
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