CX308016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308016 vs. ExPASy Swiss-Prot
Match: ATPO_IPOBA (ATP synthase subunit O, mitochondrial OS=Ipomoea batatas PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.074e-35 Identity = 76/130 (58.46%), Postives = 91/130 (70.00%), Query Frame = 2 Query: 5 ETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSILGGLVVEFGQKVFDMSIKSRARQMERFLREPIHF 394 +TRV AI EIC QAKF D T++FL++LAENGRL+++D I KRF ELTMAH+GEVK TVT+VI DP+ILGGLVVEFGQKVFDMSI++RARQMERFLREP++F Sbjct: 115 DTRVNAIKEICAQAKFGDTTQNFLLILAENGRLKHIDRIVKRFKELTMAHRGEVKATVTTVIPLPADEEKELKATLQEMVGQGKSVQIEQKIDPTILGGLVVEFGQKVFDMSIRTRARQMERFLREPLNF 244
BLAST of CX308016 vs. ExPASy Swiss-Prot
Match: ATPO_ARATH (ATP synthase subunit O, mitochondrial OS=Arabidopsis thaliana GN=At5g13450 PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 9.719e-29 Identity = 66/132 (50.00%), Postives = 85/132 (64.39%), Query Frame = 2 Query: 8 TRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSILGGLVVEFGQKVFDMSIKSRARQMERFLREPIHFGTL 403 TR+ AI + C QAKF++ TK+FL +LAENG+L+NLD I K+F++LT AH+G+VKV VT+VI DPSI GGL+VEF QKV DMSI++RA+QMER LREP+ F L Sbjct: 107 TRLAAIRDACDQAKFAEPTKNFLSLLAENGKLKNLDAIVKKFMQLTNAHRGDVKVLVTTVIPLPPAEEKELTETLQEIIGAGKKITVEQKIDPSIYGGLIVEFQQKVLDMSIRTRAQQMERLLREPVDFNNL 238
BLAST of CX308016 vs. ExPASy Swiss-Prot
Match: ATPO_PONAB (ATP synthase subunit O, mitochondrial OS=Pongo abelii GN=ATP5O PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.988e-15 Identity = 42/124 (33.87%), Postives = 65/124 (52.42%), Query Frame = 2 Query: 11 RVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 382 +VK++N+I + +FS +T + + +LAENGRL N + F + AH+GEV TVTS DPSILGG++V G+K DMS+K++ +++ R +RE Sbjct: 88 KVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSAHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEKYVDMSVKTKIQKLSRAMRE 211
BLAST of CX308016 vs. ExPASy Swiss-Prot
Match: ATPO_HUMAN (ATP synthase subunit O, mitochondrial OS=Homo sapiens GN=ATP5O PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.964e-14 Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = 2 Query: 11 RVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 382 +VK++N+I + +FS +T + + +LAENGRL N + F + H+GEV TVTS DPSILGG++V G+K DMS+K++ +++ R +RE Sbjct: 88 KVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEKYVDMSVKTKIQKLGRAMRE 211
BLAST of CX308016 vs. ExPASy Swiss-Prot
Match: ATPO_RHIFE (ATP synthase subunit O, mitochondrial OS=Rhinolophus ferrumequinum GN=ATP5O PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.967e-13 Identity = 38/124 (30.65%), Postives = 64/124 (51.61%), Query Frame = 2 Query: 11 RVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 382 +VK++N++ T+ KFS +T + + +LAENGRL N + F + H+GEV +VT+ DPSI+GG+++ G+K DMS K++ +++ R +RE Sbjct: 88 KVKSLNDMTTKEKFSPLTSNLMNLLAENGRLNNTPGVISAFSTIMSVHRGEVPCSVTTASPLDEATLSELKTVLQSFLSKNQILKLEVKTDPSIMGGMIIRIGEKYVDMSAKTKIQKLSRVMRE 211
BLAST of CX308016 vs. ExPASy Swiss-Prot
Match: ATPO_MOUSE (ATP synthase subunit O, mitochondrial OS=Mus musculus GN=Atp5o PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.967e-13 Identity = 41/124 (33.06%), Postives = 63/124 (50.81%), Query Frame = 2 Query: 11 RVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 382 +VK++N+I + KFS +T + + +LAENGRL N I F + H+GEV TVT+ DPSI+GG++V G+K DMS KS+ +++ + +RE Sbjct: 88 KVKSLNDITKREKFSPLTANLMNLLAENGRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQILKLEIKTDPSIMGGMIVRIGEKYVDMSAKSKIQKLSKAMRE 211
BLAST of CX308016 vs. ExPASy Swiss-Prot
Match: ATPO_RAT (ATP synthase subunit O, mitochondrial OS=Rattus norvegicus GN=Atp5o PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.356e-13 Identity = 39/124 (31.45%), Postives = 63/124 (50.81%), Query Frame = 2 Query: 11 RVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 382 +VK++ +I T+ KFS +T + + +LAENGRL N + F + H+GEV TVT+ DPSI+GG++V G+K DMS KS+ +++ + +R+ Sbjct: 88 KVKSLKDITTKEKFSPLTANLMNLLAENGRLGNTQGVISAFSTIMSVHRGEVPCTVTTAFPLDEAVLSELKTVLNSFLSKGQILNLEVKTDPSIMGGMIVRIGEKYVDMSAKSKIQKLSKAMRD 211
BLAST of CX308016 vs. ExPASy Swiss-Prot
Match: ATPO_BOVIN (ATP synthase subunit O, mitochondrial OS=Bos taurus GN=ATP5O PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.476e-13 Identity = 38/124 (30.65%), Postives = 63/124 (50.81%), Query Frame = 2 Query: 11 RVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 382 +VK+++++ + KFS +T + + +LAENGRL N + F + H+GEV TVT+ DPSI+GG++V G+K DMS K++ +++ R +RE Sbjct: 88 KVKSLSDMTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTVTTASALDEATLTELKTVLKSFLSKGQVLKLEVKIDPSIMGGMIVRIGEKYVDMSAKTKIQKLSRAMRE 211
BLAST of CX308016 vs. ExPASy Swiss-Prot
Match: ATPO_CALJA (ATP synthase subunit O, mitochondrial OS=Callithrix jacchus GN=ATP5O PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.275e-12 Identity = 38/126 (30.16%), Postives = 64/126 (50.79%), Query Frame = 2 Query: 11 RVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSILGGLVVEFGQKVFDMSIKSRARQMERFLREPI 388 +VK++++I + +FS +T + + +LAENGRL N + F + H+GEV TVT+ DPSI+GG++V G+K DMS K++ +++ + +RE I Sbjct: 88 KVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTTASPLEEATLSELKTVLKSFLSQGQILKLEVKTDPSIMGGMIVRIGEKYVDMSAKTKIQKLSKAMREVI 213
BLAST of CX308016 vs. ExPASy Swiss-Prot
Match: ATPO_CALMO (ATP synthase subunit O, mitochondrial OS=Callicebus moloch GN=ATP5O PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.666e-12 Identity = 37/126 (29.37%), Postives = 64/126 (50.79%), Query Frame = 2 Query: 11 RVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSILGGLVVEFGQKVFDMSIKSRARQMERFLREPI 388 +VK++++I + +FS +T + + +LAENGRL N + F + H+GE+ TVT+ DPSI+GG++V G+K DMS K++ +++ + +RE I Sbjct: 88 KVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEIPCTVTTASPLEETTLSELKTVLKSFLSQGQILKLEVKTDPSIMGGMIVRIGEKYVDMSAKTKIQKLSKAMREVI 213 The following BLAST results are available for this feature:
BLAST of CX308016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308016 ID=CX308016; Name=CX308016; organism=Citrus clementina; type=EST; length=634bpback to top |