CX308025

Overview
NameCX308025
Unique NameCX308025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308025 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.651e-32
Identity = 63/103 (61.17%), Postives = 77/103 (74.76%), Query Frame = 1
Query:    1 AIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRSDLVTGNFWVMEFYK 309
            AIF+KWILHDW D HCL++LKNCYKS+PE+GKVIV E +LPE P+T+  +++  HIDV+M+  NPGGKERT+ EF  LA GAGF G        N WVMEF K
Sbjct:  252 AIFMKWILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of CX308025 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.651e-32
Identity = 60/103 (58.25%), Postives = 77/103 (74.76%), Query Frame = 1
Query:    1 AIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRSDLVTGNFWVMEFYK 309
            AIF+KWI HDW DEHCLK LKNCY+++P +GKV+V E +LPE P+TS  +K+  H+D++M+  NPGGKERT+ EF  LA GAGF+G R        WVMEF+K
Sbjct:  257 AIFMKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of CX308025 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.545e-30
Identity = 58/103 (56.31%), Postives = 76/103 (73.79%), Query Frame = 1
Query:    1 AIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRSDLVTGNFWVMEFYK 309
            A+F+KWI HDW DEHCLK LKNCY+++P++GKVIV E +LP  P++S+ +K   HIDV+M+  NPGGKERT+ EF  LA GAGF G +      N ++MEF K
Sbjct:  261 AVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CX308025 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.635e-30
Identity = 60/103 (58.25%), Postives = 76/103 (73.79%), Query Frame = 1
Query:    1 AIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRSDLVTGNFWVMEFYK 309
            AIF+KWI HDW DEHCLK LKNCY ++P++GKVI+ E +LP  P+TS+ +K   HIDV+M+  NPGGKERT+ EF  LA G+GF GIR      N +V+EF K
Sbjct:  261 AIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CX308025 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.635e-30
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 1
Query:    1 AIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRSDLVTGNFWVMEFYK 309
            AIF+KWI HDW D+HC KLLKNCY+++P++GKVI+ E +LPE P+TS+ +++  H+DV+M+  NPGGKERT+ EF  LA GAGF   R      N W+ME  K
Sbjct:  248 AIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFRKVCSAVNTWIMELCK 350          
BLAST of CX308025 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.871e-30
Identity = 55/103 (53.40%), Postives = 75/103 (72.82%), Query Frame = 1
Query:    1 AIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRSDLVTGNFWVMEFYK 309
            AIF+KWI HDW D HCLK LKNC++++PE+GKVI+ E +LPE P++++ +++  H+DV+M+  NPGGKERT+ EF  LA GAGF G        N W+ME  K
Sbjct:  261 AIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363          
BLAST of CX308025 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.668e-30
Identity = 60/103 (58.25%), Postives = 72/103 (69.90%), Query Frame = 1
Query:    1 AIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRSDLVTGNFWVMEFYK 309
            AIF+KWI HDW DEHCLK LKNCY ++PE GKVIV E +LP  P+ S+ +K   HID +M+  NPGGKERT+ EF  LA GAGF G +      N +VMEF K
Sbjct:  266 AIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CX308025 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.308e-29
Identity = 58/103 (56.31%), Postives = 74/103 (71.84%), Query Frame = 1
Query:    1 AIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRSDLVTGNFWVMEFYK 309
            AIF+KWI HDW DEHCLK LKNCY ++P++GKVI+ E +LP  P++S+ +K   HIDV+M+  NPGGKERT+ EF  LA GAGF G        N +V+EF K
Sbjct:  261 AIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CX308025 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.308e-29
Identity = 56/103 (54.37%), Postives = 72/103 (69.90%), Query Frame = 1
Query:    1 AIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRSDLVTGNFWVMEFYK 309
            AIF+KWI HDW DEHC+K LKNCY ++P++GKVI+ E +LPE P+T + +K+  HIDV+M+  NPGGKERT+ EF  LA  AGF          N W+ME  K
Sbjct:  259 AIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of CX308025 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.708e-29
Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 1
Query:    1 AIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRSDLVTGNFWVMEFYK 309
            A+F+KWI HDW DEHCL  LKNCY ++PE+GKVI+VE +LP  P+TS+ +K   H+DV+M+  NPGGKERT  EF +LA GAGF G        N  V+EF K
Sbjct:  260 AVFMKWICHDWSDEHCLTFLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDVIMLAHNPGGKERTDREFESLARGAGFKGFEVMCCAFNTHVIEFRK 362          
The following BLAST results are available for this feature:
BLAST of CX308025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
COMT1_ZINEL1.651e-3261.17Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_CAPAN1.651e-3258.25Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_MEDSA1.545e-3056.31Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_ROSCH2.635e-3058.25Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_COFCA2.635e-3055.34Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_CATRO5.871e-3053.40Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_CLABR7.668e-3058.25Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_PRUDU1.308e-2956.31Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_OCIBA1.308e-2954.37Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT2_POPTM1.708e-2956.31Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]

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Properties
Property NameValue
Genbank descriptionC20005B11SK OF2 Citrus clementina cDNA clone C20005B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308025 ID=CX308025; Name=CX308025; organism=Citrus clementina; type=EST; length=593bp
GCCATTTTTCTGAAGTGGATACTGCACGATTGGGACGATGAACATTGCTT
GAAGTTGTTGAAGAATTGCTACAAAAGCGTTCCAGAAGATGGAAAGGTAA
TCGTTGTGGAGTTAATGCTTCCAGAAGTTCCTAATACAAGCATTGAATCA
AAATCAAATTCCCATATTGACGTGCTTATGATGACTCAAAATCCCGGTGG
AAAGGAGAGAACAAAGCATGAATTCATGACCCTGGCTACTGGCGCTGGTT
TTAGTGGGATCAGATCTGATCTTGTTACTGGTAATTTCTGGGTTATGGAG
TTCTATAAGTAGAGTGCTTGCCCATGCATCCTAGAGACGAGCAACAAGCC
ATGCATTTAACAAGCTTCCAACGTACCATAGCCATGCTTGAGAAGAGGAG
TCTACGACTTAGTAATAAGTTTCTTTGAAATAAATGGGTGCTTGAGACGT
CGTCTATTAACTACCTGTGCTATATTGCCCATATTTCCTTTTATTTCTCG
TATTTCATGTGTTATTTTCTAGAGTGTCTTTTTTTGTTCTTAATGTAGTT
AATACTGTAGATCATATGTTTTCAATTGGCTCTTATAAAATGC
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