CX308026
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 3.775e-54 Identity = 96/148 (64.86%), Postives = 119/148 (80.41%), Query Frame = 2 Query: 5 SSVALMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCWS 448 SS A+MT+ SGIRKILP S+ICDF+F+PCGYSMN++EG +STIHVTPEDGFSYASFEA+GYDF+ V L L++RVL+CF+PAEFSVALH D +G++ F LD+KGY+CGE+ YE LG GS++Y F+ T SPRS L CCWS Sbjct: 203 SSAAVMTDASGIRKILPGSDICDFDFEPCGYSMNAVEGGTISTIHVTPEDGFSYASFEAMGYDFKDVNLDALIQRVLSCFQPAEFSVALHCDSIGEKLDSVFELDVKGYACGERSYEALGKGGSIMYCGFTSTGSCGSPRSTLLCCWS 350
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 1.435e-53 Identity = 96/148 (64.86%), Postives = 118/148 (79.73%), Query Frame = 2 Query: 5 SSVALMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCWS 448 SS A+MT+ SGIRKILP SEICDF+F+PCGYSMN++EG A+S IHVTPEDGFSYASFEA+GYDF+ V L L++RVL+CF+PAEFSVALH D +G++ F LD+KGY+CGE+ YE L GS++Y F+ T SPRS L CCWS Sbjct: 203 SSAAVMTDASGIRKILPGSEICDFDFEPCGYSMNAVEGGAISPIHVTPEDGFSYASFEAMGYDFKDVNLDALIQRVLSCFQPAEFSVALHCDSIGEKLDSVFKLDVKGYACGERSYEGLNKGGSIMYCGFTSTGSCGSPRSTLLCCWS 350
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 6.664e-51 Identity = 100/147 (68.03%), Postives = 110/147 (74.83%), Query Frame = 2 Query: 5 SSVALMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 445 SS ALMT SGIRKILP SEICDFEFDPCGYSMNSIE A+STIHVTPEDGFSYASFEA GYD + L ++ERVLACF+P+EFSVA+H D+ L+LK YS EKI EELG GS+IY F R D SPRSILKCCW Sbjct: 203 SSAALMTTRSGIRKILPDSEICDFEFDPCGYSMNSIEEAAISTIHVTPEDGFSYASFEAAGYDLKAQNLGMMIERVLACFQPSEFSVAVHCDVTCKSLEQICSLELKEYSLDEKINEELGLGGSIIYKKFLRIDACGSPRSILKCCW 349
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 7.368e-50 Identity = 96/148 (64.86%), Postives = 113/148 (76.35%), Query Frame = 2 Query: 2 ESSVALMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 445 ESS A MT SGIRKILPK EICDFEF+PCGYSMNSIEG AVSTIH+TPEDGFSYASFE+VGYD + +L PL+ERVLACF+PAEFS+ALH+D+ +D+KGYS E EE G GS++Y F+RT SP+S+LK CW Sbjct: 202 ESSAAHMTVRSGIRKILPKFEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYDPKTTELGPLVERVLACFEPAEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPYCESPKSVLKGCW 349
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 9.623e-50 Identity = 96/148 (64.86%), Postives = 115/148 (77.70%), Query Frame = 2 Query: 2 ESSVALMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 445 ESS A MT SGIRKILPKSEICDFEF+PCGYSMNSIEG AVSTIH+TPEDGF+YASFE+VGY+ + ++L PL+ERVLACF+PAEFSVALH+D+ +D+KGYS E EE G GS++Y F+RT SP+S+LK CW Sbjct: 204 ESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFTYASFESVGYNPKTMELGPLVERVLACFEPAEFSVALHADVATKLLERICSVDVKGYSLAEWSPEEFGEGGSIVYQKFTRTPYCESPKSVLKGCW 351
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 9.623e-50 Identity = 94/147 (63.95%), Postives = 113/147 (76.87%), Query Frame = 2 Query: 5 SSVALMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 445 SS A MT SGIRKILP SEICDFEF+PCGYSMNSIEG AVSTIH+TPEDGFSYASFE+VGYD + ++L PL+ERVLACF+PAEFS+ALH+D+ +D+KGYS E EE G GS++Y F++T SP+S+LK CW Sbjct: 205 SSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYDLKTMELGPLVERVLACFEPAEFSIALHADVATKLLERVCCVDVKGYSLAEWSPEEFGKGGSIVYQKFTKTPYCASPKSVLKGCW 351
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.257e-49 Identity = 95/147 (64.63%), Postives = 112/147 (76.19%), Query Frame = 2 Query: 5 SSVALMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 445 SS A MT SGIRKILP SEICDFEF+PCGYSMNSIEG A+STIH+TPEDGFSYASFEAVGYD + +KL PL+ERVLACF+P EFS+ALH+D+ +D+KGYS E EE G GS++Y F+RT SP+S+LK CW Sbjct: 205 SSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPFCGSPKSVLKGCW 351
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.257e-49 Identity = 95/147 (64.63%), Postives = 112/147 (76.19%), Query Frame = 2 Query: 5 SSVALMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRTDCSTSPRSILKCCW 445 SS A MT SGIRKILP SEICDFEF+PCGYSMNSIEG A+STIH+TPEDGFSYASFEAVGYD + +KL PL+ERVLACF+P EFS+ALH+D+ +D+KGYS E EE G GS++Y F+RT SP+S+LK CW Sbjct: 205 SSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPFCGSPKSVLKGCW 351
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM_HELAN (S-adenosylmethionine decarboxylase proenzyme OS=Helianthus annuus GN=SAMDC PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 3.657e-49 Identity = 99/152 (65.13%), Postives = 122/152 (80.26%), Query Frame = 2 Query: 5 SSVALMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALH--SDIVGDEHGDTFMLDLKGYSCGEKIYEEL-GNNGSLIYYSFSRTDCST-SPRSILKCCWS 448 SS A+MTEDSGIRKILP+S+ICDF+FDPCGYSMN+IEGDA+STIHVTPEDGFSYASFEAVGYDF+ + LT L+ERVLACF+P+EFSVALH ++V D + + +++KGY+ E +E L G GS++YY F+R S SPRS L CWS Sbjct: 203 SSAAVMTEDSGIRKILPESQICDFDFDPCGYSMNAIEGDAISTIHVTPEDGFSYASFEAVGYDFKSMGLTVLIERVLACFEPSEFSVALHGNENVVKDLNLENNDVNVKGYNVEETKFEVLGGEGGSMVYYGFARGGSSCGSPRSTLHRCWS 354
BLAST of CX308026 vs. ExPASy Swiss-Prot
Match: DCAM1_ARATH (S-adenosylmethionine decarboxylase proenzyme 1 OS=Arabidopsis thaliana GN=SAMDC1 PE=2 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 9.958e-47 Identity = 90/146 (61.64%), Postives = 114/146 (78.08%), Query Frame = 2 Query: 20 MTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSRTD--CSTSPRSILKCCWS 448 MT++SGIRKILPKSEICDFEF+PCGYSMNSIEGDA+STIHVTPEDGFSYASFEAVGYDF + L+ L+ RVL+CF+P +FSVA+HS + + + +DL+ Y C E+ +E LG +G+++Y +F + C SPRS LKC WS Sbjct: 207 MTDNSGIRKILPKSEICDFEFEPCGYSMNSIEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVGANSYKPEITVDLEDYGCRERTFESLGEESGTVMYQTFEKLGKYCG-SPRSTLKCEWS 351 The following BLAST results are available for this feature:
BLAST of CX308026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308026 ID=CX308026; Name=CX308026; organism=Citrus clementina; type=EST; length=490bpback to top |