CX308639

Overview
NameCX308639
Unique NameCX308639
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX308639 vs. ExPASy Swiss-Prot
Match: SNAA_VITVI (Alpha-soluble NSF attachment protein OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 7.033e-72
Identity = 133/185 (71.89%), Postives = 158/185 (85.41%), Query Frame = -1
Query:  123 ETSSNEAISA*NRL*-ICL*HGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALERCQDMDPTFSGTREYRLLSDIAASMDEEDIAKFTDVVKEFDSMTPLDPWKTT 674
            +TS+ EAIS   +   + L +GR +MA +YYKEIAELYE E N EQ I++FEKAAD++Q+EE TT+ANQC  KVAQ+AA+LEQY K+I+IYE+I R SLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNAL+R Q+MDPTFSGTREY+LL D+AA++DEED+ KFTD VKEFDSMT LD WKTT
Sbjct:   85 KTSAKEAISCLEQAAYLFLDNGRFNMAGKYYKEIAELYELEQNFEQAIIYFEKAADIYQSEEATTAANQCNAKVAQFAAQLEQYQKAIQIYEDIGRPSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALDRYQEMDPTFSGTREYKLLVDLAAAVDEEDVVKFTDAVKEFDSMTQLDAWKTT 269          
BLAST of CX308639 vs. ExPASy Swiss-Prot
Match: SNAA2_ARATH (Alpha-soluble NSF attachment protein 2 OS=Arabidopsis thaliana GN=ASNAP2 PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.262e-70
Identity = 127/164 (77.44%), Postives = 146/164 (89.02%), Query Frame = -1
Query:  123 GRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALERCQDMDPTFSGTREYRLLSDIAASMDEEDIAKFTDVVKEFDSMTPLDPWKTT 614
            GRL+MAARYYKEIAE YES+   EQ I +FEKAA+ FQNEEVTTSANQC  KVAQYAA+LEQY K+I+IYE+IAR SLNNNLLKYGVKGHLL AG+C LCK DVV+ITNALE+ QD+DPTF+GTRE + L+D+A+++DEEDIAKFTDVVKEFDSMTPLD WKTT
Sbjct:  106 GRLNMAARYYKEIAEYYESDQKFEQAIAYFEKAAEFFQNEEVTTSANQCNLKVAQYAAQLEQYEKAIKIYEDIARHSLNNNLLKYGVKGHLLTAGMCHLCKADVVSITNALEKYQDLDPTFTGTRECKFLADLASAIDEEDIAKFTDVVKEFDSMTPLDSWKTT 269          
BLAST of CX308639 vs. ExPASy Swiss-Prot
Match: SNAA_SOLTU (Alpha-soluble NSF attachment protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 7.035e-59
Identity = 108/164 (65.85%), Postives = 136/164 (82.93%), Query Frame = -1
Query:  123 GRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALERCQDMDPTFSGTREYRLLSDIAASMDEEDIAKFTDVVKEFDSMTPLDPWKTT 614
            GRL+M+ARYYKEIAELYE E N++Q I +     +   +E+V+   NQC +K+AQ++A+ E+Y K+IEI+EEIAR S+NNNLLKYGV+ HLLNAGICQLCKGDVV I NALER Q++DPTFSGTRE +LL D+AA++DEED+AKFTD VKE+DSMT LD W+TT
Sbjct:  106 GRLNMSARYYKEIAELYEQEQNLDQAIRYAVYEINP-GSEDVSAPPNQCLKKIAQFSAQNEKYPKAIEIFEEIARHSVNNNLLKYGVREHLLNAGICQLCKGDVVPINNALERYQELDPTFSGTRECKLLVDLAAAIDEEDVAKFTDAVKEYDSMTQLDAWRTT 268          

HSP 2 Score: 26.1794 bits (56), Expect = 7.035e-59
Identity = 16/35 (45.71%), Postives = 19/35 (54.29%), Query Frame = -3
Query:  619 QHEAAQLM*-CCHCYRNI-FK*GHICLEQAVNMFV 717
            +HEAA       HCY+    K    CLEQAVN F+
Sbjct:   69 KHEAANAYADAAHCYKKSNIKEAVSCLEQAVNFFL 103          
BLAST of CX308639 vs. ExPASy Swiss-Prot
Match: SNAA1_ARATH (Alpha-soluble NSF attachment protein 1 OS=Arabidopsis thaliana GN=ASNAP1 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.607e-49
Identity = 97/147 (65.99%), Postives = 118/147 (80.27%), Query Frame = -1
Query:  141 EIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALERCQDMDPTFSGTREYRLLSDIAASMDEEDIAKFTDVVKEFDSMTPL 581
            EIAE YES+   EQ I ++E AA+ FQ EEVTTSANQC  KVAQYA++LEQ  + ++     AR SLNN LLKYGVKGHLL AG+C LCK DVV+ITNALE+ QD+DPTFSGTRE + L+D+A+++DEEDIAKFTDV KE DS++PL
Sbjct:  171 EIAEYYESDEMFEQAIAYYETAAEFFQIEEVTTSANQCNLKVAQYASQLEQQSRFMKTQ---ARHSLNNKLLKYGVKGHLLTAGMCHLCKADVVSITNALEKYQDLDPTFSGTRECKFLADLASAIDEEDIAKFTDVSKEIDSVSPL 314          

HSP 2 Score: 20.4014 bits (41), Expect = 5.607e-49
Identity = 8/19 (42.11%), Postives = 12/19 (63.16%), Query Frame = -3
Query:   73 DDPSVESEGKAEGQRVGGG 129
            D+  VE + + +GQ  GGG
Sbjct:  335 DNNVVEGKREVQGQGAGGG 353          
BLAST of CX308639 vs. ExPASy Swiss-Prot
Match: SNAA_DICDI (Alpha-soluble NSF attachment protein OS=Dictyostelium discoideum GN=snpA PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.345e-37
Identity = 75/164 (45.73%), Postives = 112/164 (68.29%), Query Frame = -1
Query:  123 GRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALERCQDMDPTFSGTREYRLLSDIAASMDEEDIAKFTDVVKEFDSMTPLDPWKTT 614
            GR +++A++ KEIAELYE+E + +Q I  ++ A+D F  E  T S++QC  K+A ++A+LE+Y KSIEIYE++A  SL+NNL ++G K + L A +C L   DVV    AL+R +DM  +F+ TRE RLL  I  +    ++  FT+ V EF+S++PLD WKT+
Sbjct:  111 GRFAISAKHQKEIAELYEAEGDFDQAIASYQIASDYFDGENSTVSSHQCLLKIALFSAQLERYEKSIEIYEQVAAASLDNNLTQWGCKEYFLRACLCYLAADDVVGAERALQRYKDMQASFNSTRECRLLDGIIQACRNNNVEDFTNEVAEFNSISPLDSWKTS 274          
BLAST of CX308639 vs. ExPASy Swiss-Prot
Match: SNAP_DROME (Soluble NSF attachment protein OS=Drosophila melanogaster GN=Snap PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.979e-35
Identity = 71/165 (43.03%), Postives = 115/165 (69.70%), Query Frame = -1
Query:  123 GRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALERCQDMDPTFSGTREYRLLSDIAASMDEEDIAKFTDVVKEFDSMTPLDPWKTT 614
            GR +MAA++++ IAE+YES+ +N+ ++I  +E+AAD F+ EE  +SAN+C  KVAQYAA+LE Y K+I IYE++A  SL ++LLKY  K +   A +C L   D++   +A+E+     P F  +RE++L+  +  +++E++I  FT+ VK++DS++ LD W TT
Sbjct:  113 GRFTMAAKHHQSIAEMYESDPNNLAKSIQHYEQAADYFKGEESVSSANKCMLKVAQYAAQLEDYEKAISIYEQVAASSLESSLLKYSAKEYFFRAALCHL-SVDLLNAQHAIEKYAQQYPAFQDSREFKLIKVLCENLEEQNIEGFTEAVKDYDSISRLDQWYTT 276          
BLAST of CX308639 vs. ExPASy Swiss-Prot
Match: SNAB_MOUSE (Beta-soluble NSF attachment protein OS=Mus musculus GN=Napb PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.435e-33
Identity = 82/208 (39.42%), Postives = 131/208 (62.98%), Query Frame = -1
Query:  123 NMKLLSLCDAATAIETSSN--------EAISA*NR-L*ICL*HGRLSMAARYYKEIAELYESEH-NIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALERCQDMDPTFSGTREYRLLSDIAASMDEEDIAKFTDVVKEFDSMTPLDPWKTT 716
            +M+L S  D+AT+   + N        EAI+  N  + I    GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+IEIYE++   +++N LLKY  K +   A +C     ++ A   ALE+ ++M P F+ +RE +LL  +  + +E++   +T+ VKEFDS++ LD W TT
Sbjct:   72 HMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPLLKYSAKDYFFKAALCHFIVDELNA-KLALEKYEEMFPAFTDSRECKLLKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWLTT 278          
BLAST of CX308639 vs. ExPASy Swiss-Prot
Match: SNAB_HUMAN (Beta-soluble NSF attachment protein OS=Homo sapiens GN=NAPB PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.435e-33
Identity = 82/208 (39.42%), Postives = 131/208 (62.98%), Query Frame = -1
Query:  123 NMKLLSLCDAATAIETSSN--------EAISA*NR-L*ICL*HGRLSMAARYYKEIAELYESEH-NIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALERCQDMDPTFSGTREYRLLSDIAASMDEEDIAKFTDVVKEFDSMTPLDPWKTT 716
            +M+L S  D+AT+   + N        EAI+  N  + I    GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+IEIYE++   +++N LLKY  K +   A +C     ++ A   ALE+ ++M P F+ +RE +LL  +  + +E++   +T+ VKEFDS++ LD W TT
Sbjct:   72 HMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPLLKYSAKDYFFKAALCHFIVDELNA-KLALEKYEEMFPAFTDSRECKLLKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWLTT 278          
BLAST of CX308639 vs. ExPASy Swiss-Prot
Match: SNAB_BOVIN (Beta-soluble NSF attachment protein OS=Bos taurus GN=NAPB PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.434e-32
Identity = 82/208 (39.42%), Postives = 131/208 (62.98%), Query Frame = -1
Query:  123 NMKLLSLCDAATAIETSSN--------EAISA*NR-L*ICL*HGRLSMAARYYKEIAELYESEH-NIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALERCQDMDPTFSGTREYRLLSDIAASMDEEDIAKFTDVVKEFDSMTPLDPWKTT 716
            +M+L S  D+AT+   + N        EAI+  N  + I    GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+IEI+E+I   +++N LLKY  K +   A +C     ++ A   ALE+ ++M P F+ +RE +LL  +  + +E++   +T+ VKEFDS++ LD W TT
Sbjct:   72 HMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIFEQIGANTMDNPLLKYSAKDYFFKAALCHFIVDELNA-KLALEKYEEMFPAFTDSRECKLLKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWLTT 278          
BLAST of CX308639 vs. ExPASy Swiss-Prot
Match: SNAA_MOUSE (Alpha-soluble NSF attachment protein OS=Mus musculus GN=Napa PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.171e-32
Identity = 76/208 (36.54%), Postives = 132/208 (63.46%), Query Frame = -1
Query:  123 NMKLLSLCDAATAIETSSN--------EAISA*NR-L*ICL*HGRLSMAARYYKEIAELYESEH-NIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALERCQDMDPTFSGTREYRLLSDIAASMDEEDIAKFTDVVKEFDSMTPLDPWKTT 716
            +++L S  DAAT    + N        EAI+   R + I    GR ++AA+++  IAE+YE+E  ++E+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+I+IYE++   ++++ LLKY  K +   A +C  C  D++    A+++ +++ P FS +RE +L+  +  + +E+++  +T+ VKE+DS++ LD W TT
Sbjct:   72 HLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCI-DMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHEEQNVDSYTEAVKEYDSISRLDQWLTT 278          
The following BLAST results are available for this feature:
BLAST of CX308639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
SNAA_VITVI7.033e-7271.89Alpha-soluble NSF attachment protein OS=Vitis vini... [more]
SNAA2_ARATH2.262e-7077.44Alpha-soluble NSF attachment protein 2 OS=Arabidop... [more]
SNAA_SOLTU7.035e-5965.85Alpha-soluble NSF attachment protein OS=Solanum tu... [more]
SNAA1_ARATH5.607e-4965.99Alpha-soluble NSF attachment protein 1 OS=Arabidop... [more]
SNAA_DICDI7.345e-3745.73Alpha-soluble NSF attachment protein OS=Dictyostel... [more]
SNAP_DROME8.979e-3543.03Soluble NSF attachment protein OS=Drosophila melan... [more]
SNAB_MOUSE6.435e-3339.42Beta-soluble NSF attachment protein OS=Mus musculu... [more]
SNAB_HUMAN6.435e-3339.42Beta-soluble NSF attachment protein OS=Homo sapien... [more]
SNAB_BOVIN1.434e-3239.42Beta-soluble NSF attachment protein OS=Bos taurus ... [more]
SNAA_MOUSE4.171e-3236.54Alpha-soluble NSF attachment protein OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionC21002B12Rv AbsLeaSub1 Citrus clementina cDNA clone C21002B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX308639 ID=CX308639; Name=CX308639; organism=Citrus clementina; type=EST; length=731bp
AATCAATCCAGAGGAAAATATAAAATCAAAGCACATTAATGTATGTATAT
ATGTCAAATTTAGGTAAGATCGTCCTCCTCCAACTCTTTGGCCTTCAGCT
TTTCCTTCACTCTCAACAGAAGGGTCGTCTTCCATGGATCCAGAGGTGTC
ATGCTATCAAACTCCTTAACAACATCTGTAAACTTCGCAATGTCTTCCTC
ATCCATGGACGCAGCAATGTCCGACAATAGTCTGTATTCACGTGTTCCAG
AAAAGGTAGGATCCATGTCCTGGCATCGCTCCAATGCGTTGGTAATAGCA
ACAACATCACCCTTGCAAAGTTGGCATATGCCAGCATTAAGAAGATGTCC
TTTCACTCCATATTTCAACAAGTTGTTGTTGAGAGACTGCCTAGCAATCT
CTTCATAAATCTCAATTGACTTGTGATATTGTTCCAATTCAGCAGCATAT
TGTGCAACTTTCTGCTTGCACTGGTTAGCAGAAGTTGTTACTTCTTCATT
TTGGAACATATCAGCTGCCTTCTCAAAGAAAACAATAGTCTGTTCAATGT
TGTGCTCAGATTCATACAGCTCAGCAATTTCCTTATAATATCTTGCAGCC
ATACTGAGCCTTCCATGTCACAAACATATTTACAGCCTGTTCTAAGCAGA
TATGGCCTCATTTGAAGATGTTTCTATAGCAGTGGCAGCATCACATAAGC
TGAGCAGCTTCATGTTGCTTCACCGCGTACT
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