DY256641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY256641 vs. ExPASy Swiss-Prot
Match: RNF38_HUMAN (RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4) HSP 1 Score: 77.411 bits (189), Expect = 6.625e-14 Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 149 DPDELSYEELLALGEVVG-SESRGLSADTLATLPTVNYKAGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 433 D + +YE LL L E +G ++ RGL+ + LP+ + Q+ CV+C D+E + L VL C H +H++C++ WLK N+ CP+C A+ S Sbjct: 414 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQS-EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 508
BLAST of DY256641 vs. ExPASy Swiss-Prot
Match: RNF44_HUMAN (RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13 Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = 2 Query: 143 EVDPDEL-SYEELLALGEVVG-SESRGLSADTLATLPTVNYKAGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 433 +VD E+ +YE LL L E +G ++ RGL+ + LP+ + + Q+ CV+C D+E + L VL C H +H++C++ WLK N+ CP+C A+ S Sbjct: 328 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADAS 425
BLAST of DY256641 vs. ExPASy Swiss-Prot
Match: RNF44_DANRE (RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13 Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 143 EVDPDEL-SYEELLALGEVVG-SESRGLSADTLATLPTVNYKAGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 433 +VD E+ +YE LL L E +G ++ RGL+ + LP+ + Q+ CV+C D+E + L VL C H +H++C++ WLK N+ CP+C A+ S Sbjct: 344 DVDDVEMENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNLENHQS-EQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADAS 441
BLAST of DY256641 vs. ExPASy Swiss-Prot
Match: RNF38_MOUSE (RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13 Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 149 DPDELSYEELLALGEVVG-SESRGLSADTLATLPTVNYKAGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 433 D + +YE LL L E +G ++ RGL+ + LP+ + Q+ CV+C D+E + L VL C H +H++C++ WLK N+ CP+C A+ S Sbjct: 417 DGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQS-EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADAS 511
BLAST of DY256641 vs. ExPASy Swiss-Prot
Match: RNF44_RAT (RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.928e-13 Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = 2 Query: 143 EVDPDEL-SYEELLALGEVVG-SESRGLSADTLATLPTVNYKAGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 433 +VD E+ +YE LL L E +G ++ RGL+ + LP+ + + Q+ CV+C D+E + L VL C H +H++C++ WLK N+ CP+C A+ S Sbjct: 246 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 343
BLAST of DY256641 vs. ExPASy Swiss-Prot
Match: RNF44_MOUSE (RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.928e-13 Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = 2 Query: 143 EVDPDEL-SYEELLALGEVVG-SESRGLSADTLATLPTVNYKAGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 433 +VD E+ +YE LL L E +G ++ RGL+ + LP+ + + Q+ CV+C D+E + L VL C H +H++C++ WLK N+ CP+C A+ S Sbjct: 303 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 400
BLAST of DY256641 vs. ExPASy Swiss-Prot
Match: RF12B_XENLA (E3 ubiquitin-protein ligase rnf12-B OS=Xenopus laevis GN=rnf12-B PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.019e-11 Identity = 32/95 (33.68%), Postives = 47/95 (49.47%), Query Frame = 2 Query: 161 LSYEELLALGEVVGSESRGLSADTLATLPTVNYKAGTSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVSTSGH 445 LS + L E + RGL+ + + L T NY +N + +C +C +Y +G L L C H YH CI+ WL N CP+C V +G+ Sbjct: 662 LSLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNY----GENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVAGN 752
BLAST of DY256641 vs. ExPASy Swiss-Prot
Match: RN165_HUMAN (RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 2 Query: 164 SYEELLALGEVVGSESRGLSADTLA--TLPTVNYKAGTSQNG-----------SNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVST 436 SYEELL L + +G+ +RG +T+ T P YK Q+G +++ C IC EDGE + L C H +H C++ WL ++K CP+C ++ T Sbjct: 238 SYEELLQLEDRLGNVTRGAVQNTIERFTFPH-KYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 340 The following BLAST results are available for this feature:
BLAST of DY256641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY256641 ID=DY256641; Name=DY256641; organism=Citrus clementina; type=EST; length=630bpback to top |