DY256661

Overview
NameDY256661
Unique NameDY256661
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1020
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15504 contig Ccv1_Contig15504:388..1407. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 4.501e-87
Identity = 155/248 (62.50%), Postives = 198/248 (79.84%), Query Frame = 1
Query:    1 MEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFEN--GLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEYFRSRYARELRGKSQLDSLRI 738
            MEEKKK+WQRP ++EGFGQAFVVSE+QKLDWADLF     PV LRKPHLFPKLP   R+TLE+YS E++++A+ LI+KM   L IK EE+ + F++   +Q MRMNYYPPCPQP++V+GL+PHSD+  LT+L+Q+N+VEGLQ+KKDGKW+PV PLP+AFIVNIGD LEIITNGTYRSIEHR VVNS +ERLS+AT ++V    EV PA SL+  +    F+R+ ++EY    ++R L GK+ LD+LRI
Sbjct:  111 MEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKERLSIATFHNVGMYKEVGPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.788e-51
Identity = 106/245 (43.27%), Postives = 151/245 (61.63%), Query Frame = 1
Query:    4 EEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEYFRSRYARELRGKSQLDSLRI 738
            +EK  Y Q P  MEG+GQAFV SEEQKLDWAD+  ++T PV  R    +P  P S RET+E YSMEL+ +A  L   M + L ++ E + +     +        P      + +GLSPHSDA  LT+L+Q+NEV GL +KKD KW+P+ P+  AF+VNIGD +EI++NG Y+SIEHRAV+N+ +ERLS+A  +   Y  ++ P   L+ E     ++ +  E+Y       +L GKS LD +++
Sbjct:  110 KEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRT-VFNREDELLPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLVKENGVK-YKTIDYEDYLIRSSNIKLDGKSLLDQMKL 352          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.163e-34
Identity = 82/229 (35.81%), Postives = 126/229 (55.02%), Query Frame = 1
Query:    4 EEKKKYWQRPG--DMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF--ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEY 678
            EEK+   + PG  D+EG+G +     E K  W D       P        +PK PPS RE  E Y   ++ + + +   +   L ++  EM E    +  +  +++NYYPPCP+P+  +G+  H+D + +TIL+  NEV+GLQV KDG W  V  +P+A IV+IGD +EI++NG Y+S+ HR  VN  + R+S         + EV P   L+SE  PP F+  + ++Y
Sbjct:  111 EEKELIAKTPGSNDIEGYGTSLQKEVEGKKGWVDHLFHKIWPPSAVNYRYWPKNPPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVP-NEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPSEHEVGPIPKLLSEANPPKFKTKKYKDY 338          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.194e-33
Identity = 75/226 (33.19%), Postives = 125/226 (55.31%), Query Frame = 1
Query:   73 EEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGM-----RMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLI-------SEKTPPLFRRVRIEEYFRSRYARELRGK 714
            E + LDW   F +  LP         P L    R T++ +++EL+ LAE L+  + E L ++   +++ F  G  G+     +++ YPPCP+PE + GL  H+DA  + +L Q ++V GLQ+ KDG+WI V P+  + +VNIGD LE+ITNG Y+S+ HR V  +   R+S+A+ Y+   D  ++PA +L+        EK   ++ +   ++Y      ++   K
Sbjct:   82 EPENLDWESTFFLRHLPTS--NISQIPDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEKEEKKKEIYPKFVFQDYMNLYIRKKFEAK 305          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.742e-33
Identity = 89/259 (34.36%), Postives = 130/259 (50.19%), Query Frame = 1
Query:    1 MEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVH--LRKPHLFPKLPPSLRETLEVYSM---ELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTP---PLFRRVRIEEYFRSRYARELRGKSQLDSLRIQHGQG 753
            + EK++  +RPG+  G+  +F      KL W +  S  + P    L   ++   L    R   EVY+    E+  L+  ++  +GE L +     R FFE     MR+NYYPPC +P + +G  PH D  +LTIL Q N V GLQV  +G+W  + P  DAF+VNIGDT   ++NG Y+S  HRAVVNS   R S+A       D  V P  +L+    P   P F    + ++ +  Y  +++      S  +Q  QG
Sbjct:   99 LPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAYPDFTWRSLLDFTQKHYRADMKTLEVFSSWIVQQQQG 356          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.887e-33
Identity = 89/259 (34.36%), Postives = 130/259 (50.19%), Query Frame = 1
Query:    1 MEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVH--LRKPHLFPKLPPSLRETLEVYSM---ELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTP---PLFRRVRIEEYFRSRYARELRGKSQLDSLRIQHGQG 753
            + EK++  +RPG+  G+  +F      KL W +  S  + P    L   ++   L    R   EVY+    E+  L+  ++  +GE L +     R FFE     MR+NYYPPC +P + +G  PH D  +LTIL Q N V GLQV  +G+W  + P  DAF+VNIGDT   ++NG Y+S  HRAVVNS   R S+A       D  V P  +L+    P   P F    + ++ +  Y  +++      S  +Q  QG
Sbjct:   99 LPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDASNPRAYPDFTWRSLLDFTQKHYRADMKTLEVFSSWIVQQQQG 356          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.887e-33
Identity = 77/214 (35.98%), Postives = 119/214 (55.61%), Query Frame = 1
Query:    4 EEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDG--KWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEK 639
            EEK +Y    G   GF  + V+  +  +DW +  +  + P++ R    +PK P   R T EVYS +L  L   L+  + E + ++  ++ +   +  Q + +NYYP CPQP+  +G+  H+D   +TILLQ + V GLQ  +DG   WI V P+  AF+VN+GD    ++NG +R+ +H+AVVNS   RLS+AT  +   +  VYP      EK
Sbjct:   99 EEKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQ-DMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNSTSSRLSIATFQNPAQNAIVYPLKIREGEK 311          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 8.337e-33
Identity = 76/219 (34.70%), Postives = 128/219 (58.45%), Query Frame = 1
Query:   52 GQAFVVSEEQKLDWADLFSMMTLPVHLRKPHL--FPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF--ENGLQ-GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLI---SEKTPPLFRRVRIEEYFR 684
            G   V +E   +DW   F +     HL K ++   P L    R  ++ ++++L+ LAE L+  + E L ++   +++ F   NG   G +++ YPPCP PE + GL  H+DA  L +L Q ++V GLQ+ KDG+WI V P+  + ++N+GD LE+ITNG YRS+EHR +  +   R+S+A+ Y+   D  +YPA +L+   +E+   ++ +   E+Y +
Sbjct:   73 GLEAVKTEVNDMDWESTFYLR----HLPKSNISEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPTLVEKEAEEKNQVYPKFVFEDYMK 287          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.089e-32
Identity = 81/229 (35.37%), Postives = 127/229 (55.46%), Query Frame = 1
Query:    4 EEKKKYWQRPG--DMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF--ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEY 678
            EEK+   ++PG   +EG+G +     E K  W D       P        +PK PPS RE  E Y+  L+ +A+ +   +   L ++  EM E    E+ +  +++NYYPPCP+P+  +G+  H+D + +T+L+  NEV   QV KDG W  V  +P+A IV+IGD +EI++NG Y+S+ HR  VN  + R+S         + EV P  +LI+E  PP F+  + ++Y
Sbjct:  115 EEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAINYRYWPKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLVP-NEV---QVFKDGHWYDVNYIPNAIIVHIGDQVEILSNGKYKSVYHRTTVNKYKTRMSWPVFLEPSSEHEVGPIPNLINEANPPKFKTKKYKDY 339          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.089e-32
Identity = 78/229 (34.06%), Postives = 125/229 (54.59%), Query Frame = 1
Query:    7 EKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGL-QGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEYFRSR 690
            EK+   +  G +EG+G+   +  +++    D   + T P        +PK PP  RE  E Y+  +KTL+E ++  + E L +  E ++E   NG    M +N+YPP P  +   GL PH+D   LT+++  NE+ GLQV KD  WI V  +P A IVNIGD + +++NG Y+++ H+  V+  + R+S   + S  YD  V P   L SE  PP F+ +  ++Y  ++
Sbjct:   58 EKRSCAREAGSVEGYGRRIELDIKKRKGIVDQIYLSTWPPSSVNYRYWPKSPPDYREVNEEYARHVKTLSEKIMEWLSEGLGLGREAIKEV--NGCWYVMNINHYPPYPHSDSFNGLEPHTDINGLTLIIT-NEIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKEKTRMSWPVLVSPTYDMVVGPLPELTSEDDPPKFKPIAYKDYVHNK 283          
The following BLAST results are available for this feature:
BLAST of DY256661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
SRG1_ARATH4.501e-8762.50Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
NCS1_COPJA6.788e-5143.27S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
FLS_PETHY1.163e-3435.81Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
ACCO1_DORSP2.194e-3333.191-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
GAO1B_WHEAT3.742e-3334.36Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
GAO1A_WHEAT4.887e-3334.36Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
FNSI_PETCR4.887e-3335.98Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
ACCO_PRUMU8.337e-3334.701-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
FLS_SOLTU1.089e-3235.37Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FLS_MATIN1.089e-3234.06Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1BE10ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256661 ID=DY256661; Name=DY256661; organism=Citrus clementina; type=EST; length=1020bp
ATGGAAGAAAAGAAAAAATATTGGCAGCGTCCAGGAGATATGGAAGGATT
TGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGGGCTGACC
TTTTCTCCATGATGACTCTTCCAGTTCATCTGAGGAAACCACATTTATTT
CCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACTCAATGGA
ATTAAAAACCCTAGCCGAGAACCTAATATCGAAAATGGGAGAAGTGTTAA
ATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAATGGACTGCAAGGA
ATGAGGATGAATTATTACCCTCCATGTCCTCAGCCCGAGAAGGTTATGGG
CCTGTCGCCGCATTCTGATGCGGCTGCACTTACCATTCTGCTACAACTTA
ATGAAGTGGAGGGTCTCCAGGTAAAGAAGGATGGAAAGTGGATTCCTGTT
ACCCCACTCCCGGATGCTTTCATTGTCAACATTGGAGACACATTGGAGAT
TATAACCAATGGGACATACCGTAGCATTGAGCATCGTGCAGTTGTAAACT
CTGTACAGGAAAGACTTTCCGTTGCCACAGTTTACTCAGTGAGATATGAT
GGTGAAGTATATCCTGCCTCCAGTTTGATCTCTGAAAAAACTCCTCCTTT
GTTTAGAAGAGTGAGAATTGAAGAATACTTTAGGAGCCGGTATGCTCGTG
AGCTTAGGGGAAAATCTCAGCTGGATTCCCTGAGAATTCAACATGGTCAA
GGCTAGTATAAGTTTATTTCGGATAACTAAAGAGTTTGGTACAAAAACTC
TGAAGGACCTTGCTATTGAGATTGTGTGTGGAACTGAAAATAAAAAATAA
GTTCTATGATTACTGTGGTATAACCTGCTATGCTGGGATCGTTGTGTAAC
TCCATTCTTTGAGATACTGGATAGACCATGTAAAGATTCTTAAAAATTGC
AAACTTTTGCCTGGAATCCTTCGATGAAAAATGGTGGGTGTTAAATCAAA
TCATTTATTTTCTTTTTTTT
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