DY256685

Overview
NameDY256685
Unique NameDY256685
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1013
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14892 contig Ccv1_Contig14892:1..996. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY256685 vs. ExPASy Swiss-Prot
Match: YAI5_SCHPO (Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe GN=SPAC24B11.05 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.323e-19
Identity = 82/241 (34.02%), Postives = 111/241 (46.06%), Query Frame = 1
Query:   88 LLFDLDDTLYPLSTGFNLACRRNIKEFMSRHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHALVHGKLPYEK-LKPDPVLRNLLLSMPQRKI--IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAG----LHTVIVGSSVPVPPA-DHALNSIHNIKEAIPEIWEGE 783
            + FDLD+ LYP S   +      I  F S  L I   E  R+    YR +G  + GL  + +E D  ++   V   LP EK +K D VLR +LL + ++    IFTNA   HA  VL  LG+EDCF+GI   +                     + + ++ KP  E  E  +R A V D  K IF DDS  NI  A+  G    +  V  G  +P P A  H +  IH  K  + EI +GE
Sbjct:    8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VLHHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYLGIEDCFDGITYCD--------------------YNAKDLIAKPMPEMYERVMREAGVTDKDKCIFVDDSYGNILGAREFGWKYTVQLVEHGDPLPQPQAGSHVIRDIHKFKHLLDEI-DGE 226          
BLAST of DY256685 vs. ExPASy Swiss-Prot
Match: SSM1_YEAST (Protein SSM1 OS=Saccharomyces cerevisiae GN=SSM1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.994e-16
Identity = 63/212 (29.72%), Postives = 104/212 (49.06%), Query Frame = 1
Query:   76 NYECLLFDLDDTLYPLSTGFNLACRRNIKEFMSRHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHALVHGKLPYEK-LKPDPVLRNLLLSMPQR-KI----IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFF-DDSARNIASAKAAGLHTVI 690
            N +   FD+D+ LY  ST  +   +++I  F   HL +   +   +    Y+E+G  + GL  + ++ +  E++ LV   LP +  LKPD  LRN+LL + Q  KI    +FTNA + HA+  L  LG+ D F                   DG+    +S    ++CKP ++A E A++ + +   +  +F DDS +NI +    G+ T I
Sbjct:   54 NLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF-------------------DGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 245          
BLAST of DY256685 vs. ExPASy Swiss-Prot
Match: PHM8_YEAST (Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae GN=PHM8 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.723e-14
Identity = 58/208 (27.88%), Postives = 97/208 (46.63%), Query Frame = 1
Query:   94 FDLDDTLYPLSTGFNLACRRNIKEFMSRHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHALVHGKLPYEK-LKPDPVLRNLLLSMPQRKI-------IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVI 690
            FD+D+TLY  ST   L  ++++  F    L  D+ E  R+    Y+E+G ++ GL       D  +++  +   LP +  LKPD  LR LL+++ ++K+       +FTN+ + HA+  +  LG+ D F+GI       P                   +  +CKP  +  ETA   + +       F DD+  N+ SA + G+  VI
Sbjct:   57 FDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIKNKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAIRCVKILGIADLFDGITYCHYDRP-----------------IEEEFICKPDPKFFETAKLQSGLSSFANAWFIDDNESNVRSALSMGMGHVI 247          
The following BLAST results are available for this feature:
BLAST of DY256685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
YAI5_SCHPO2.323e-1934.02Uncharacterized protein C24B11.05 OS=Schizosacchar... [more]
SSM1_YEAST6.994e-1629.72Protein SSM1 OS=Saccharomyces cerevisiae GN=SSM1 P... [more]
PHM8_YEAST1.723e-1427.88Phosphate metabolism protein 8 OS=Saccharomyces ce... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA1CB08ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256685 ID=DY256685; Name=DY256685; organism=Citrus clementina; type=EST; length=1013bp
GAGAGCTGTTATAATCATTTTGTAATTGAAGGTCCGGCCTTGAAGATGGA
TACCATGGGAAGGACAACTGCAGCCAATTACGAGTGCCTGCTCTTCGATT
TGGATGACACTTTATACCCATTGAGCACTGGTTTTAACTTGGCCTGCCGT
AGGAACATAAAAGAGTTCATGTCGCGACACTTGCACATAGATGAAAGTGA
AGTACCCAGGATGTGTTTGGAATTGTACCGGGAACACGGGACAACAATGG
CCGGTCTAAAGGCTGTTGGTTATGAGTTTGACAATGATGAGTTTCATGCT
CTTGTCCACGGAAAATTACCTTACGAAAAGCTGAAGCCTGATCCAGTATT
AAGAAACCTTCTACTTTCCATGCCACAGCGAAAAATAATCTTCACCAATG
CTGATCAGAAGCATGCAATGGAAGTTCTCGGCAGGTTGGGCTTGGAAGAT
TGTTTTGAAGGCATCATATGCTTTGAAACTATTAACCCCCGTCTTCAACC
GGCCGACAACACGGACGGAATTGAGAACAACAGTTTCAGCTCCAACCAAA
GGATCCTCTGTAAACCCTCACTGGAAGCTATTGAAACTGCTATTAGGATC
GCAAATGTTGACCCAAAGAAAACAATTTTCTTTGACGACAGTGCTCGAAA
CATTGCAAGTGCAAAGGCAGCAGGTCTTCATACCGTGATTGTGGGGAGCT
CAGTTCCGGTGCCTCCAGCAGACCACGCCTTGAACAGCATTCACAACATC
AAAGAGGCAATACCCGAAATATGGGAAGGTGAAGGAGAGCAGCTTGAGCA
GGTCATTCAGCCAGCTGCAGTTGAGACCGCAGTCCTTGCATAGGTGGTGG
GTTGTAAAAGTATTTTGAAAGATGAATCCTAAGATCAAACCAAACCTCTA
GATTGTCTAAAGAAATCAAATATAGTGAGGGTGCTTTATATTGCAGAAAA
CGCTCATGTAAGTAACCCCCGGGCCCCGGGGAACACTACCCATAAAAAAA
AACTTTGAATTGG
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