DY256737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 1.708e-72 Identity = 130/139 (93.53%), Postives = 132/139 (94.96%), Query Frame = 2 Query: 2 SELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLYKPPSA 418 SELM LMM G GISAFPEEDNIFCWKGTI GSKDTVFEGTEYRLSLSF NDYPFKPPKVKFET CFHPNVD+YGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN+QAAQLWSNQEEYRKMVEKLYKPPSA Sbjct: 42 SELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 180
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.036e-69 Identity = 126/139 (90.65%), Postives = 130/139 (93.53%), Query Frame = 2 Query: 2 SELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLYKPPSA 418 SELM LMM D GISAFPEEDNIFCWKGTI GSKDTVFEGTEYRLSL+F NDYPFK PKVKFET CFHPNVD+YGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN+QAAQLWSNQEEYRKMVEKLYKP +A Sbjct: 43 SELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKPLNA 181
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.272e-51 Identity = 94/135 (69.63%), Postives = 112/135 (82.96%), Query Frame = 2 Query: 2 SELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLYK 406 SELM LMM GISAFP+ DNIF W GTIQG+KDTV+E E+++SL FP DYP+KPP VKFET CFHPNVD GNICLDIL+DKWS Y+VR++L+SIQSLLGEPN SPLNS AA LWSNQ+EY+K+++K Y+ Sbjct: 13 SELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLWSNQDEYKKVLDKRYQ 147
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 5.910e-49 Identity = 86/134 (64.18%), Postives = 111/134 (82.84%), Query Frame = 2 Query: 5 ELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLYK 406 EL L+MSGD GI+AFP+ DN+F W T+ G KDTV+E +Y+L+L FP+DYP+KPP VKF T C+HPNVD GNICLDIL++ W+++YDVRTILLS+QSLLGEPN +SPLN+QAA +WSNQ EY+K++ + YK Sbjct: 38 ELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMWSNQTEYKKVLHEKYK 171
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.831e-48 Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 2 Query: 5 ELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLY 403 ELM LMMSGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T C+HPNVD GNICLDIL+DKWS+ YDVRTILLSIQSLLGEPNI SPLN+ AA+LW N ++K +++ Y Sbjct: 38 ELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.831e-48 Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 2 Query: 5 ELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLY 403 ELM LMMSGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T C+HPNVD GNICLDIL+DKWS+ YDVRTILLSIQSLLGEPNI SPLN+ AA+LW N ++K +++ Y Sbjct: 38 ELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.003e-48 Identity = 89/134 (66.42%), Postives = 104/134 (77.61%), Query Frame = 2 Query: 5 ELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLYK 406 ELM LMMSGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T CFHPNVD +GNICLDIL+DKWS+ YDVRTILLS+QSLLGEPN SPLN AA+LW NQ Y+K + + Y+ Sbjct: 38 ELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQNQTAYKKHLHEQYQ 171
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.115e-47 Identity = 87/133 (65.41%), Postives = 104/133 (78.20%), Query Frame = 2 Query: 5 ELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLY 403 ELM LMMSGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T C+HPNVD GNICLDIL++KWS+ YDVRTILLSIQSLLGEPNI SPLN+ AA+LW N ++K +++ Y Sbjct: 38 ELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.456e-47 Identity = 87/134 (64.93%), Postives = 107/134 (79.85%), Query Frame = 2 Query: 5 ELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLYK 406 ELM LMM+ + GISAFP+ +NIF W GTI G ++TV+ G YRLSL FPN YP+ P VKF T CFHPNVD+ G ICLDIL+DKWS+ YDVRTILLSIQSLLGEPN SPLN+QAA +W++Q+EY+K ++ Y+ Sbjct: 40 ELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWNDQKEYKKYLDAFYE 173
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.483e-47 Identity = 87/133 (65.41%), Postives = 103/133 (77.44%), Query Frame = 2 Query: 5 ELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLY 403 ELM LM SGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T C+HPNVD GNICLDIL+DKWS+ YDVRTILLSIQSLLGEPNI SPLN+ AA+LW N ++K +++ Y Sbjct: 38 ELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170 The following BLAST results are available for this feature:
BLAST of DY256737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256737 ID=DY256737; Name=DY256737; organism=Citrus clementina; type=EST; length=606bpback to top |