DY256776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY256776 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.422e-38 Identity = 92/169 (54.44%), Postives = 110/169 (65.09%), Query Frame = 2 Query: 2 NSSGTDGVVPVQTRNVNANVHLVNDACFDLDFPGSK---SYGYGYNXXXXXXXXXXXXXXXEVGVVPDGSSAMTDITNPYGKGV--GVEAGNQTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEV--EPADRSSSIYGFGIVPS 487 NSSGTDGVVPV+ R V + VN+ CF++DF G +YG GYN EVGVVPDG S + D++ PYG G + G Q V +++A+REARV+RYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD + GFG+VP+ Sbjct: 200 NSSGTDGVVPVENRTVR--IPTVNENCFEMDFTGGSKGFTYGGGYNCISHSVSSSSM----EVGVVPDGGS-VADVSYPYGGPATSGADPGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIFSGFGLVPT 361
BLAST of DY256776 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.687e-29 Identity = 79/162 (48.77%), Postives = 91/162 (56.17%), Query Frame = 2 Query: 2 NSSGTDGVVPVQTRNVNANVHLVNDACFDLDFPGSKSYGYGYNXXXXXXXXXXXXXXXEVGVVPDGSSAMTDITNPYGKGVGVEAGNQTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEVEPADRSSSIYGFGIVPS 487 NSSG DGVVPVQ N +N+ F+ D SK G+N +V +VP+ ++TN VQ+S A+REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD GFG+VPS Sbjct: 152 NSSGNDGVVPVQ------NKLFLNEDYFNFDLSASKISQQGFNFINQTVSTRTI----DVPLVPESGGVTAEMTNT----------ETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSRENDGGDVGVYGGFGVVPS 293
BLAST of DY256776 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 7.318e-27 Identity = 77/167 (46.11%), Postives = 96/167 (57.49%), Query Frame = 2 Query: 2 NSSGTDGVVPVQTRNVNANVHLVNDACFDLDFPGSKSYGYGYNXXXXXXXXXXXXXXXEVGVVPDGSSAMTDITNPYGKGVGVEAGNQTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLE-----VEPADRSSSIYGFGIVPS 487 N++G D +VPVQT+ + ND CFD+DF SK + Y E GVVPDG++ N + + Q S+ DREARVLRYREKRKNRKFEKTIRYASRKAYAE RPRIKGRFAKRT+ E + S++ +G+VP+ Sbjct: 196 NNAGGDSLVPVQTKTEPLPL-TNNDHCFDIDFCRSKLSAFTY--PSQSVSHSVSTSSIEYGVVPDGNT-----NNSVNRSTITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDDIFLSHVYASAAHAQYGVVPT 354
BLAST of DY256776 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.436e-22 Identity = 70/170 (41.18%), Postives = 94/170 (55.29%), Query Frame = 2 Query: 5 SSGTDGVVPVQTRNVNANVHLVNDACFDLDFPGSKSYGYGYNXXXXXXXXXXXXXXX-EVGVVPDGSSAMTDITNPYGKGVGVEA----GNQTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEVEPADRSS----SIYGFGIVPS 487 S G DGVVP+Q +++ + F L S G YN ++ VVP+ +++ + +P ++ Q V Q++ +REARVLRYREK+K RKF+KTIRYASRKAYAE+RPRIKGRFAKR + E E + S S G+GIVPS Sbjct: 178 SFGGDGVVPLQVEESTSHLQQ-SQQNFQLGINYGFSSGAHYNNNSLKDLNHSASVSSMDISVVPESTASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPS 346
BLAST of DY256776 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.156e-22 Identity = 61/113 (53.98%), Postives = 76/113 (67.26%), Query Frame = 2 Query: 176 EVGVVPDGSSAMTDITNPYGKGVGVEAGNQ------TVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEVEPADRSSSIY---GFGIVPS 487 E GVVP+ ++ +T ++P VE TV Q+S DREARVLRYREKRK RKFEKTIRYASRKAYAE+RPR+ GRFAKR ++E E ++ + G+GIVPS Sbjct: 261 ETGVVPESTACVTTASHPRTPKGTVEQQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR-EIEAEEQGFNTMLMYNTGYGIVPS 372
BLAST of DY256776 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.156e-22 Identity = 58/109 (53.21%), Postives = 75/109 (68.81%), Query Frame = 2 Query: 176 EVGVVPDGSSAMTDITNPYG-KGVGVEAGNQTVVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDLEVEPADRSSSIY----GFGIVPS 487 ++GVVP+ +++ ++NP K V + +S DREARVLRYREK+K RKFEKTIRYASRKAYAE RPRIKGRFAK+ D++ E S++ G+GIVPS Sbjct: 246 DLGVVPESTTSDATVSNPRSPKAVTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMITFDTGYGIVPS 354
BLAST of DY256776 vs. ExPASy Swiss-Prot
Match: COL7_ARATH (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.310e-11 Identity = 34/50 (68.00%), Postives = 37/50 (74.00%), Query Frame = 2 Query: 281 SAADREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDL 430 S +REARVLRY+EKR+ R F K IRY RK AE RPRIKGRF KRT L Sbjct: 341 SDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTSL 390 The following BLAST results are available for this feature:
BLAST of DY256776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY256776 ID=DY256776; Name=DY256776; organism=Citrus clementina; type=EST; length=754bpback to top |