DY256796

Overview
NameDY256796
Unique NameDY256796
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1321
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256796 vs. ExPASy Swiss-Prot
Match: CHKB_MOUSE (Choline/ethanolamine kinase OS=Mus musculus GN=Chkb PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 2.577e-19
Identity = 59/206 (28.64%), Postives = 109/206 (52.91%), Query Frame = 1
Query:  211 DALQVIPLKGAMTNEVYQIAWP---AKNNGLVRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRK-ALLWDRLRRWVSVAKSF--CSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNF 810
            + L V P+ G ++N +++ + P       G  R VL+R+YG  ++   +   E   F  ++ +  GP+L G F +GR+E+++ +R L   ++RDP +S  +A +M  FH ++MP  ++   L+  + R++   +     S        +Y+LKDE++ L K L +    + FCHND+Q GNI++  E  S   ++   F  +  N+
Sbjct:   67 EELSVCPVSGGLSNLLFRCSLPNHVPSVGGEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYLPSRPLKTQELRDPVLSGAIATRMARFHGMEMPFTKEPRWLFGTMERYLKQIQDLPSTSLPQMNLVEMYSLKDEMNSLRKLLDDTPSPVVFCHNDIQEGNILLLSEPDSDDNLMLVDFEYSSYNY 272          
BLAST of DY256796 vs. ExPASy Swiss-Prot
Match: CHKB_HUMAN (Choline/ethanolamine kinase OS=Homo sapiens GN=CHKB PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 2.577e-19
Identity = 66/248 (26.61%), Postives = 126/248 (50.81%), Query Frame = 1
Query:   70 LQSPLCAELTTRKAIKTTELLPSSSPEELKKVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGL---VRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKA-LLWDRLRRWVSVAKSF--CSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMI--DEETSSITIIVSFTF 789
            LQ   C + TT K  + + L   +     +   + +   W  V    + L+V P+ G ++N +++ + P     +    R VL+R+YG  ++   +   E   F  ++ +  GP+L G F +GR+E++I +R L   ++R+P +S  +A KM +FH ++MP  ++   L+  + R++   +        +     +Y+LKDE+  L K L +    + FCHND+Q GNI++  + E +   ++V F +
Sbjct:   23 LQQSKCPD-TTPKRRRASSLSRDAERRAYQWCREYLGGAWRRV--QPEELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEY 267          
BLAST of DY256796 vs. ExPASy Swiss-Prot
Match: CHKB_RAT (Choline/ethanolamine kinase OS=Rattus norvegicus GN=Chkb PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 1.279e-18
Identity = 59/206 (28.64%), Postives = 107/206 (51.94%), Query Frame = 1
Query:  211 DALQVIPLKGAMTNEVYQIAWP---AKNNGLVRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRK-ALLWDRLRRWVSVAKSF--CSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITIIVSFTFLQNMLNF 810
            + L V P+ G ++N +++ + P       G  R VL+R+YG  ++   +   E   F  ++ +  GP+L G F +GR+E+++ +R L   ++RDP +S  +A KM  FH ++MP  ++   L+  + R++   +     S        +Y+LKDE++ L   L      + FCHND+Q GNI++  E  S   ++   F  +  N+
Sbjct:   67 EELSVCPVSGGLSNLLFRCSLPNHVPSMGGEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYLPSRPLKTQELRDPVLSGAIATKMARFHGMEMPFTKEPRWLFGTMERYLKQIQDLPSTSLPQMNLVEMYSLKDEMNHLRTLLDATPSPVVFCHNDIQEGNILLLSEPDSDDNLMLVDFEYSSYNY 272          
BLAST of DY256796 vs. ExPASy Swiss-Prot
Match: KICH_SCHPO (Putative choline kinase OS=Schizosaccharomyces pombe GN=SPAC13G7.12c PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 9.165e-17
Identity = 60/192 (31.25%), Postives = 97/192 (50.52%), Query Frame = 1
Query:  217 LQVIPLKGAMTNEVYQIAWPAKNNGLVRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKAL----LWDRLRRWVSVAKSFC-----SAKDAKEFCLYTLKDEISMLEK---ELPNDHQE-----IGFCHNDLQYGNIM 741
            L +  + GA+TN VY +A P   +     +L+RIYG  VE+F NR  E+   + ++    GP L+G F +GR E+++ + TL+   IRDPK+S  V  ++ E H+  +  P + L     W     W+  AK+       S     EF + TL+++ +       E   D ++     + F HND QYGN++
Sbjct:   63 LHIKRISGALTNAVYYVAPPEGYHA--PKLLLRIYGPHVELFINRQVELENLKRLARHNIGPYLIGEFSNGRFEQYMESTTLTCKTIRDPKLSIYVGRRLCELHNFILLHPHEVLEMPAAWKNCLVWLPKAKAKILGRKHSLAITSEF-MKTLEEDFNAYYNWFVEWSRDKKDWFGLKMVFSHNDTQYGNLL 251          
BLAST of DY256796 vs. ExPASy Swiss-Prot
Match: KICH_YEAST (Choline kinase OS=Saccharomyces cerevisiae GN=CKI1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.911e-14
Identity = 61/214 (28.50%), Postives = 106/214 (49.53%), Query Frame = 1
Query:  160 KVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLVRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFI-HARTLSAADIRDPKISELVAAKMREFHD----LKMPGPRKALLWDRLRRWV-SVAKSFCSAKDAKE-----FCLYTLK--DEISMLEKELPNDHQEIG-------FCHNDLQYGNIM 741
            K +Q VA D          + ++ + GAMTN ++++ +P      + ++L+RIYG  ++   +R+ E++    +S +  GP L G F +GR E+F+ +++TL+  DIR+ K S+ +A +M+E H     L       +  W ++ +W+ ++ K      D K       C    K  D +    K L +  Q I        FCHND QYGN++
Sbjct:  139 KKIQPVAQD----------MNLVKISGAMTNAIFKVEYPK-----LPSLLLRIYGPNIDNIIDREYELQILARLSLKNIGPSLYGCFVNGRFEQFLENSKTLTKDDIRNWKNSQRIARRMKELHVGVPLLSSERKNGSACWQKINQWLRTIEKVDQWVGDPKNIENSLLCENWSKFMDIVDRYHKWLISQEQGIEQVNKNLIFCHNDAQYGNLL 337          
BLAST of DY256796 vs. ExPASy Swiss-Prot
Match: EKIA_DICDI (Probable ethanolamine kinase A OS=Dictyostelium discoideum GN=etnkA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.496e-14
Identity = 50/191 (26.18%), Postives = 89/191 (46.60%), Query Frame = 1
Query:  217 LQVIPLKGAMTNEVYQIAWP-AKNNGLVRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRRWVSVAKSFCSAKDAKEFC----LYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITII 774
            L +  L G +TN +Y +     +       V++R+YG   E   +R +E+         G G +  G F +G +  FI    L+  DI  P +   +A ++ ++H ++MP  +   LW  +++W ++A       +  E+     +  + +E  MLE+ L   +  I FCHNDL  GNI+ D   +  + I
Sbjct:   44 LTIQKLNGGITNVLYLVEDKNIEQKYRYLPVVIRLYGYKSEEIIDRKNELIIQTEADQNGLGAKFYGLFDNGCIYGFIKGEPLAYEDISKPTMQTCIAKEIAQWHSIEMPTRKNPSLWPTIKKWAALAPDVYPVPEKNEYYQSINVKKMIEEGKMLEQRLAQLNSPIVFCHNDLLSGNIIYDPSQNCASFI 234          
BLAST of DY256796 vs. ExPASy Swiss-Prot
Match: CHKA_MOUSE (Choline kinase alpha OS=Mus musculus GN=Chka PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.496e-14
Identity = 59/208 (28.37%), Postives = 97/208 (46.63%), Query Frame = 1
Query:  211 DALQVIPLKGAMTNEVYQIAWP---AKNNGLVRNVLVRIYG----------EGVEVFFNRDD---------EIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMP-GPRKALLWDRLRRWVSVAKSFCSAKDAK-----EFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDE 750
            D   +  ++G ++N ++Q + P   A      R VL+R+YG          EG E   N ++         E   F  ++ +  GP+L G F  GR+E+FI +R L   ++R P IS  +A KM  FH +KMP       L+  + ++++       +++A+     +   Y L  E+  L   L      + FCHND Q GNI++ E
Sbjct:  105 DQFHISVIRGGLSNMLFQCSLPDSIASVGDEPRKVLLRLYGAILKMRSCNKEGSEQAQNENEFQGAEAMVLESVMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELRLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLNQVLRLKFSREARVQQLHKILSYNLPLELENLRSLLQYTRSPVVFCHNDCQEGNILLLE 312          
BLAST of DY256796 vs. ExPASy Swiss-Prot
Match: EKI2_HUMAN (Ethanolamine kinase 2 OS=Homo sapiens GN=ETNK2 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.260e-14
Identity = 45/159 (28.30%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  304 VLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGP-RKALLWDRLRRWVSVAKSFCS-AKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITII 774
            VLVR+YGE  E+  +R++E+R F+ + +    P+L   F +G   E++    L    IR+P++  L+A +M + H +   G   K +LW ++  + ++ K+  + +  A    +  L+ E++ L++ L      + FCHNDL   NI+ D     +  I
Sbjct:  109 VLVRVYGERTELLVDRENEVRNFQLLRAHSCAPKLYCTFQNGLCYEYMQGVALEPEHIREPRLFRLIALEMAKIHTIHANGSLPKPILWHKMHNYFTLVKNEINPSLSADVPKVEVLERELAWLKEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFI 267          
BLAST of DY256796 vs. ExPASy Swiss-Prot
Match: CHKA_RAT (Choline kinase alpha OS=Rattus norvegicus GN=Chka PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 4.257e-14
Identity = 59/208 (28.37%), Postives = 97/208 (46.63%), Query Frame = 1
Query:  211 DALQVIPLKGAMTNEVYQIAWP---AKNNGLVRNVLVRIYG----------EGVEVFFNRDD---------EIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMP-GPRKALLWDRLRRWVSVAKSFCSAKDAK-----EFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDE 750
            D   +  ++G ++N ++Q + P   A      R VL+R+YG          EG E   N ++         E   F  ++ +  GP+L G F  GR+E+FI +R L   ++  P IS  +A KM  FH +KMP       L+  + ++++       +++A+     +F  Y L  E+  L   L      + FCHND Q GNI++ E
Sbjct:  105 DQFHISVIRGGLSNMLFQCSLPDSIASVGDEPRKVLLRLYGAILKMRSCNKEGSEQAQNENEFQGAEAMVLESVMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELCLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLNQVLRLKFSREARVQQLHKFLSYNLPLELENLRSLLQYTRSPVVFCHNDCQEGNILLLE 312          
BLAST of DY256796 vs. ExPASy Swiss-Prot
Match: EKI1_HUMAN (Ethanolamine kinase 1 OS=Homo sapiens GN=ETNK1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.369e-12
Identity = 45/165 (27.27%), Postives = 84/165 (50.91%), Query Frame = 1
Query:  304 VLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGP--RKALLWDRLRRWVSVAKSFCSAKDAKEFCL------YTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEETSSITII 774
            VLVRIYG   E+  +RD+E+++F  + + G  P+L   F +G   EFI    L    + +P I  L+A ++ + H +        K+ LW ++ ++ S+  +  + +D  +  L        L++E++ +++ L N    +  CHNDL   NI+ +E+   +  I
Sbjct:  164 VLVRIYGNKTELLVDRDEEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGEALDPKHVCNPAIFRLIARQLAKIHAIHAHNGWIPKSNLWLKMGKYFSLIPTGFADEDINKRFLSDIPSSQILQEEMTWMKEILSNLGSPVVLCHNDLLCKNIIYNEKQGDVQFI 328          
The following BLAST results are available for this feature:
BLAST of DY256796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CHKB_MOUSE2.577e-1928.64Choline/ethanolamine kinase OS=Mus musculus GN=Chk... [more]
CHKB_HUMAN2.577e-1926.61Choline/ethanolamine kinase OS=Homo sapiens GN=CHK... [more]
CHKB_RAT1.279e-1828.64Choline/ethanolamine kinase OS=Rattus norvegicus G... [more]
KICH_SCHPO9.165e-1731.25Putative choline kinase OS=Schizosaccharomyces pom... [more]
KICH_YEAST1.911e-1428.50Choline kinase OS=Saccharomyces cerevisiae GN=CKI1... [more]
EKIA_DICDI2.496e-1426.18Probable ethanolamine kinase A OS=Dictyostelium di... [more]
CHKA_MOUSE2.496e-1428.37Choline kinase alpha OS=Mus musculus GN=Chka PE=1 ... [more]
EKI2_HUMAN3.260e-1428.30Ethanolamine kinase 2 OS=Homo sapiens GN=ETNK2 PE=... [more]
CHKA_RAT4.257e-1428.37Choline kinase alpha OS=Rattus norvegicus GN=Chka ... [more]
EKI1_HUMAN1.369e-1227.27Ethanolamine kinase 1 OS=Homo sapiens GN=ETNK1 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAA2AH12ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256796 ID=DY256796; Name=DY256796; organism=Citrus clementina; type=EST; length=1321bp
GGGCCTTGCTTTCATCCCTCTTGACAACTCAGTTTTTCTCTTCCTCTTAG
GTGAAGTTTTCAATTTTCGTTGCAATCACCACTTTGTGCTGAGCTGACTA
CAAGAAAGGCTATAAAGACAACTGAATTGTTACCAAGTTCTTCTCCAGAA
GAATTAAAGAAAGTTCTTCAATCAGTTGCTTCCGACTGGGGAGATGTTAT
CGATGATTCGGATGCATTGCAGGTGATTCCATTAAAAGGTGCAATGACTA
ATGAGGTTTACCAAATAGCGTGGCCTGCAAAAAATAATGGTCTTGTTAGA
AACGTTTTGGTCCGGATTTATGGAGAAGGCGTCGAGGTTTTCTTCAATAG
GGATGATGAAATTAGAACCTTTGAGTGCATGTCAAGCCAAGGCCAGGGGC
CCAGGCTTCTCGGGCGGTTCGGTGATGGAAGAGTTGAGGAGTTCATTCAT
GCCAGGACACTGTCGGCTGCTGACATCCGTGACCCCAAAATCTCTGAGTT
GGTAGCGGCAAAGATGAGAGAATTTCATGATCTCAAAATGCCTGGTCCAA
GGAAAGCACTACTATGGGACAGACTGAGGAGATGGGTTAGTGTGGCCAAA
AGTTTCTGTTCTGCTAAAGATGCAAAGGAATTCTGCTTGTATACTCTGAA
GGATGAAATCAGTATGCTGGAGAAAGAGTTGCCAAATGACCATCAAGAGA
TTGGCTTTTGTCACAATGATCTTCAGTATGGAAACATTATGATTGACGAA
GAGACCAGCTCAATTACTATAATTGTAAGTTTTACTTTCTTACAGAACAT
GCTGAATTTTTAGAGAGCATGCACAAAGATCTTGTTATTTCTTGCCTTCT
CTGACAATTCGCCAATGGTATGCAACGTGGTGGTTAAGAATACTTGGTTA
ACCGCTTTAAAAATCCAAATTCAAAAAACAAGCATAAAAGCCTTCTCAAG
CAAATATGCTTCCAAACCATTTGGGGGCAGGCCTTTTTCCGTCCCCTTTT
AAAAAAGGGGATAAAAAAAGGAAAATTTTCAAACGTTCTTTTCTAAAAAT
TTACTAATAAAGAAAATTTTTTTCATTTCTTTTGAAATTTTTTTGGCCTC
CCTCAGGAATTATGAAATATGGCCTATTTTAAAATCCCCTGGTGGCCAAT
TAGACACCTTTGCGAAAACCCTCTTTTTTGTGGAAAAAAGGGGGCGCCAA
AAATTTACCCCCCCTTCCGAAAAAACCCCCCTCCTCCAATTTTTTCGGGG
GGGAAACAAAAAAAACCTATTTTATAAACCCACCCCCGGGCGCCCCCCGG
GGGGAGGGGAAAAAAAGGTCG
back to top