DY256879

Overview
NameDY256879
Unique NameDY256879
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length411
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15369 contig Ccv1_Contig15369:531..941. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY256879 vs. ExPASy Swiss-Prot
Match: AKH1_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.079e-33
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 2
Query:    2 GVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 229
            GVVDA+ K+G VEL+RYKKDHPFAQLSG+DNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLA YLGAPS
Sbjct:  836 GVVDAVEKKGTVELKRYKKDHPFAQLSGADNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLAFYLGAPS 911          
BLAST of DY256879 vs. ExPASy Swiss-Prot
Match: AKH2_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH2 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.997e-33
Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 2
Query:    2 GVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 229
            GVVDA+N++G VELRRYKK+HPFAQL+GSDNIIAFTT RYK+ PLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS
Sbjct:  841 GVVDAVNQKGTVELRRYKKEHPFAQLAGSDNIIAFTTTRYKDHPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 916          
BLAST of DY256879 vs. ExPASy Swiss-Prot
Match: AKH2_MAIZE (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Zea mays GN=AKHSDH2 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.036e-32
Identity = 64/76 (84.21%), Postives = 72/76 (94.74%), Query Frame = 2
Query:    2 GVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 229
            G +DA+N+ G+VELRRY++DHPFAQLSGSDNIIAFTT RYKEQPLIVRGPGAGA+VTAGG+F DILRLASYLGAPS
Sbjct:  842 GALDAVNRSGQVELRRYRRDHPFAQLSGSDNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASYLGAPS 917          
BLAST of DY256879 vs. ExPASy Swiss-Prot
Match: AKH1_MAIZE (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Zea mays GN=AKHSDH1 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.320e-31
Identity = 63/76 (82.89%), Postives = 72/76 (94.74%), Query Frame = 2
Query:    2 GVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 229
            GVVD ++K+G+VELR YK+DHPFAQLSGSDNIIAFTT RYK+QPLIVRGPGAGA+VTAGG+F DILRL+SYLGAPS
Sbjct:  845 GVVDVVSKKGQVELRAYKRDHPFAQLSGSDNIIAFTTSRYKDQPLIVRGPGAGAEVTAGGVFCDILRLSSYLGAPS 920          
BLAST of DY256879 vs. ExPASy Swiss-Prot
Match: AKH_DAUCA (Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic (Fragment) OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.459e-30
Identity = 62/76 (81.58%), Postives = 72/76 (94.74%), Query Frame = 2
Query:    2 GVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 229
            GVVDA+N++G VEL+RYKK+HPFAQLSGSDNI AFTT+RY +QP I+RGPGAGA+VTAGG+FSDILRLASYLGAPS
Sbjct:  846 GVVDAVNQKGVVELKRYKKEHPFAQLSGSDNINAFTTERYNKQPPIIRGPGAGAEVTAGGVFSDILRLASYLGAPS 921          
BLAST of DY256879 vs. ExPASy Swiss-Prot
Match: DHOM_SCHPO (Probable homoserine dehydrogenase OS=Schizosaccharomyces pombe GN=SPBC776.03 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.857e-15
Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 2
Query:    2 GVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGA 223
            G  D  NK   V+L +Y   HPFA L  SDNII+FTTKRY  +PL+V G GAGA VTA G+  D++++ S + A
Sbjct:  297 GEADVANKTTLVKLEKYDASHPFANLQSSDNIISFTTKRYHTRPLVVIGAGAGAAVTAAGVLGDMIKIMSQVRA 370          
BLAST of DY256879 vs. ExPASy Swiss-Prot
Match: DHOM_EMENI (Homoserine dehydrogenase OS=Emericella nidulans GN=AN2882 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.158e-13
Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = 2
Query:    2 GVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYL 217
            G VD   KE RV L+++ KD   A L GSDNII+F T+RY   PLIV+G GAG  VTA G+ +D+L++   L
Sbjct:  297 GSVDVAKKEVRVGLQQFDKDSAIAGLKGSDNIISFYTRRYGSNPLIVQGAGAGGDVTAMGVTADLLKVIERL 368          
BLAST of DY256879 vs. ExPASy Swiss-Prot
Match: DHOM_YEAST (Homoserine dehydrogenase OS=Saccharomyces cerevisiae GN=HOM6 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.792e-12
Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 2
Query:    2 GVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYL 217
            G VD   K   V + +Y   HPFA L GSDN+I+  TKRY   P++++G GAGA VTA G+  D++++A  L
Sbjct:  289 GKVDVATKSVSVGIEKYDYSHPFASLKGSDNVISIKTKRY-TNPVVIQGAGAGAAVTAAGVLGDVIKIAQRL 359          
BLAST of DY256879 vs. ExPASy Swiss-Prot
Match: AK2H_ECOLI (Bifunctional aspartokinase/homoserine dehydrogenase 2 OS=Escherichia coli (strain K12) GN=metL PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 1.981e-11
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 2
Query:   20 NKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYL 217
            N + RV +   ++DHP A L   DN+ A  ++ Y++ PL++RGPGAG  VTAG I SDI RLA  L
Sbjct:  745 NGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAIQSDINRLAQLL 810          
The following BLAST results are available for this feature:
BLAST of DY256879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
AKH1_ARATH1.079e-3390.79Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH2_ARATH6.997e-3388.16Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH2_MAIZE2.036e-3284.21Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH1_MAIZE1.320e-3182.89Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH_DAUCA1.459e-3081.58Bifunctional aspartokinase/homoserine dehydrogenas... [more]
DHOM_SCHPO3.857e-1551.35Probable homoserine dehydrogenase OS=Schizosacchar... [more]
DHOM_EMENI6.158e-1351.39Homoserine dehydrogenase OS=Emericella nidulans GN... [more]
DHOM_YEAST1.792e-1245.83Homoserine dehydrogenase OS=Saccharomyces cerevisi... [more]
AK2H_ECOLI1.981e-1148.48Bifunctional aspartokinase/homoserine dehydrogenas... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA2CH09ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256879 ID=DY256879; Name=DY256879; organism=Citrus clementina; type=EST; length=411bp
AGGAGTGGTGGATGCTATCAACAAAGAGGGGCGTGTAGAGTTGCGAAGAT
ACAAGAAAGATCATCCATTTGCACAGCTCTCTGGTTCTGATAACATCATA
GCTTTCACAACAAAACGATACAAGGAGCAGCCACTTATCGTCCGTGGACC
TGGTGCCGGAGCTCAAGTCACAGCAGGTGGTATCTTCAGCGATATATTGC
GGCTGGCCTCATATCTTGGTGCCCCATCATAGTGTATCAATTTCTATGCC
TTTCAGACTGGTTTTAGCCTTCTCTTTTTGGTTATTTGAGGCAGTAGCAT
TGGTAGTTTTATCTGCTGGATGATGATAGTGTTTTGAGTTAGTAATTACG
TATCTTAGTCGTCTTAGAACTTACGAACTTTCAAAATAAAGTTTATCTAG
TAGCTTGAAAG
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