DY256916

Overview
NameDY256916
Unique NameDY256916
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15052 contig Ccv1_Contig15052:51..783. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY256916 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.150e-13
Identity = 64/206 (31.07%), Postives = 101/206 (49.03%), Query Frame = 2
Query:   17 ILALATKPQLGASES--EPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGK-NGQ--CPTDVIQLSPKDKRGKNLGLLPYD-NSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNFFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGV-SNVDGVQRLVVVD 595
            +LA A  P L A++S   P+LD+ G ++ +   YY+V  L     GGG++      NG   CP  V+Q   +    + L   P +    +VR ST++ + FS     +  +  ++W++D  + S G+ F+TIG  K      T  ++FK+E+   S F           YK+V C T V GSC   C DVG+  +  G +RL + D
Sbjct:   17 LLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRD--HGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSS-TVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGF-----------YKLVFCPT-VCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
BLAST of DY256916 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.241e-12
Identity = 50/189 (26.46%), Postives = 93/189 (49.21%), Query Frame = 2
Query:   59 SEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLLPYDN-STIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNFFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGVSNVDGVQRLVVVDDND 604
            + P+LD  G+++ +  +YY++S++ G   GGG++  +     CP  V+Q       G  +     D+   +VR ST++ ++F  +   + C+  ++W++DN + S GK ++T    K      T  ++FK+EK                 YK   C ++ + SC TLC D+G  + D  Q  + + DN+
Sbjct:   28 NSPVLDTDGDELQTGVQYYVLSSISGA-GGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD-RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGV------------LGYKFRFCPSVCD-SCTTLCSDIGRHSDDDGQIRLALSDNE 201          
BLAST of DY256916 vs. ExPASy Swiss-Prot
Match: SPOR1_IPOBA (Sporamin A OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 2
Query:   50 ASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKD-KRGKNLGLLPY---DNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGE-GKTCQNFFKLEKVSASIFDMKI 466
            AS   P+LD+ G++V +   YY+VSA+WG   GG   A      +C TDVI +SP D   G  + + P      ST+V  ST    +F+ +++ + C  +  W + +D+AS G+ F+  GE      N FK+E V A++   K+
Sbjct:   37 ASSETPVLDINGDEVRAGGNYYMVSAIWGAGGGGLRLAHLDMMSKCATDVI-VSPNDLDNGDPITITPATADPESTVVMASTYQTFRFN-IATNKLCVNNVNWGIQHDSAS-GQYFLKAGEFVSDNSNQFKIELVDANLNSYKL 177          
The following BLAST results are available for this feature:
BLAST of DY256916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MIRA_RICDU1.150e-1331.07Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC8.241e-1226.4621 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
SPOR1_IPOBA4.090e-1134.03Sporamin A OS=Ipomoea batatas PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionKN0AAA2DF12ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256916 ID=DY256916; Name=DY256916; organism=Citrus clementina; type=EST; length=733bp
AACACTCTCCTTCCTTATACTTGCTTTGGCCACAAAACCTCAGTTGGGCG
CCTCAGAATCTGAACCTATCTTAGATGTCTATGGCAACCAGGTGGACTCC
AGCCACAGGTATTATCTTGTCTCAGCACTCTGGGGAGTTAAAACCGGCGG
TGGAATTAGCGCGGACAAAGGCAAAAATGGACAGTGTCCAACGGATGTTA
TCCAATTAAGTCCTAAGGACAAAAGGGGAAAGAATTTAGGTTTACTTCCG
TATGACAATTCCACAATTGTCCGGGAATCCACTAATATTAAATTGAAATT
CTCAAGAGTTTCTTCTCTTCAGCAGTGTAACAAAGATTCGTTGTGGAAAG
TTGACAACGATAACGCTTCATTAGGAAAGCAGTTTATAACAATCGGTGAA
GGTAAAACGTGTCAAAATTTTTTTAAACTTGAGAAAGTTAGTGCATCAAT
ATTTGATATGAAAATAGCACTAGACATTCCCTGTCTATACAAAATTGTTC
ATTGTTCAACACTTGTTAATGGTTCTTGCGATACACTCTGCAAAGACGTT
GGCGTTTCTAATGTGGATGGCGTCCAACGTCTAGTTGTGGTTGATGATAA
TGATCAGCCAAATCTGCCTTTGCCTGTTGTGTTATTTCCAGCTGATAGTG
GAAGATCTATGTTATTTCCGTCTCTGTAATGAATAAGCCAACAGGCTGTA
TTATTCTAAATAATGGACCAGGCTAGTACTCTC
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