DY256980

Overview
NameDY256980
Unique NameDY256980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length852
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10355 contig Ccv1_Contig10355:930..1781. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY256980 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.100e-32
Identity = 83/223 (37.22%), Postives = 128/223 (57.40%), Query Frame = 3
Query:    9 TAVQVEETKTFLGLLPIFASTIMMNCCLAQLQTFSVQQGIIMNRTI-NNFKIPTQSLTVFPLTIMLASIPLYERSVHIFERKISAKYNIFRPLKRIGLGLALASGSMAVAAVVESTRRAAAENH---------VTLSVFWLVWQYLLLGVSDMLTLGGMLEFFYSEAPHSMRSISTALSWCSTSMGYFLSSALVSITNLVSGKFGGEWLGGNDLNHARLDLFY 647
            T  +VEETK  L +LP+   T + +  LAQ+ T  ++QG  ++R + NNF IP  SL  F    ML SI +Y+R    F RK++        L+R+G+G+ L    M +A++ E  R   A  H         + LS+F L+ QY+L+G++D       LEFFY +AP SM+S+ T+ +  S ++GYF+SS L+S  + ++ K G  W+  N+LN +RLD +Y
Sbjct:  319 TITEVEETKQMLKMLPVLFVTFVPSMMLAQIMTLFIKQGTTLDRRLTNNFSIPPASLLGFTTFSMLVSIVIYDRVFVKFMRKLTGNPRGITLLQRMGIGMILHILIMIIASITERYRLKVAAEHGLTHQTAVPIPLSIFTLLPQYVLMGLADAFIEIAKLEFFYDQAPESMKSLGTSYTSTSMAVGYFMSSILLSSVSQITKKQGRGWI-QNNLNESRLDNYY 540          
BLAST of DY256980 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.035e-31
Identity = 80/242 (33.06%), Postives = 135/242 (55.79%), Query Frame = 3
Query:    9 TAVQVEETKTFLGLLPIFASTIMMNCCLAQLQTFSVQQGIIMNRTIN-NFKIPTQSLTVFPLTIMLASIPLYERSVHIFERKISAKYNIFRPLKRIGLGLALASGSMAVAAVVE-------STRRAAAENHVTLSVFWLVWQYLLLGVSDMLTLGGMLEFFYSEAPHSMRSISTALSWCSTSMGYFLSSALVSITNLVSGKFGGEWLGGNDLNHARLDLFYALLCXXXXXXXXXXXXWAKRY 710
            +  QVEE K+ + LLP++A+ I+     +Q+ T  V QG  M++ +  NF+IP+ SL++F    +L   P+Y++ +    RK +     F  L+R+G+GL ++  +M  A V+E        T  A  +  + +S+FW + QYLL+G +++ T  G LEFFY +AP +MRS+ +ALS  + ++G +LS+ LV++   ++ K G      ++LN   LD F+ LL              +KRY
Sbjct:  319 SVTQVEELKSIITLLPVWATGIVFATVYSQMSTMFVLQGNTMDQHMGKNFEIPSASLSLFDTVSVLFWTPVYDQFIIPLARKFTRNERGFTQLQRMGIGLVVSIFAMITAGVLEVVRLDYVKTHNAYDQKQIHMSIFWQIPQYLLIGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVALGNYLSTVLVTVVMKITKKNGKPGWIPDNLNRGHLDYFFYLLATLSFLNFLVYLWISKRY 560          
BLAST of DY256980 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.533e-31
Identity = 83/226 (36.73%), Postives = 132/226 (58.41%), Query Frame = 3
Query:    9 TAVQVEETKTFLGLLPIFASTIMMNCCLAQLQTFSVQQGIIMNRTIN-NFKIPTQSLTVFPLTIMLASIPLYERSVHIFERKISAKYNIFRPLKRIGLGLALASGSMAVAAVVESTRRAAAENH-------VTLSVFWLVWQYLLLGVSDMLTLGGMLEFFYSEAPHSMRSISTALSWCSTSMGYFLSSALVSITNLVSGKFGGE--WLGGNDLNHARLDLFYALL 656
            T  QVEE K  + LLPI+A+ I+     +Q+ T  V QG  +++ +  NFKIP+ SL++F    +L   P+Y++ +  F RK +     F  L+RIG+GL ++  SM  A ++E  R    + H       + +++FW V QY L+G +++ T  G LEFFY +AP +MRS+ +ALS  + + G +LS+ LV++   V+ + GG   W+  N LN+  LD F+ LL
Sbjct:  319 TVTQVEELKALIRLLPIWATGIVFASVYSQMGTVFVLQGNTLDQHMGPNFKIPSASLSLFDTLSVLFWAPVYDKLIVPFARKYTGHERGFTQLQRIGIGLVISIFSMVSAGILEVARLNYVQTHNLYNEETIPMTIFWQVPQYFLVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTAIAFGNYLSTFLVTLVTKVT-RSGGRPGWIAKN-LNNGHLDYFFWLL 542          
BLAST of DY256980 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.732e-31
Identity = 77/224 (34.38%), Postives = 126/224 (56.25%), Query Frame = 3
Query:    9 TAVQVEETKTFLGLLPIFASTIMMNCCLAQLQTFSVQQGIIMNRTINNFKIPTQSLTVFPLTIMLASIPLYERSVHIFERKISAKYNIFRPLKRIGLGLALASGSMAVAAVVESTRRAAAEN--------HVTLSVFWLVWQYLLLGVSDMLTLGGMLEFFYSEAPHSMRSISTALSWCSTSMGYFLSSALVSITNLVSGKFGGEWLGGNDLNHARLDLFYALL 656
            T  QVEE K  + + PI+AS I+ +   AQ+ T  VQQG  MN  I +F++P  +L  F    ++  +PLY+R +    RK +     F  ++R+G+GL ++   MA AA+VE  R   A +         V +SV W + QY +LG +++    G LEFFY ++P +MRS+ +AL+  + ++G +LSS ++++    + + G E    ++LN   LD F+ LL
Sbjct:  337 TVTQVEELKILIRMFPIWASGIIFSAVYAQMSTMFVQQGRAMNCKIGSFQLPPAALGTFDTASVIIWVPLYDRFIVPLARKFTGVDKGFTEIQRMGIGLFVSVLCMAAAAIVEIIRLHMANDLGLVESGAPVPISVLWQIPQYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILTLVTYFTTRNGQEGWISDNLNSGHLDYFFWLL 560          
BLAST of DY256980 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.545e-30
Identity = 84/222 (37.84%), Postives = 125/222 (56.31%), Query Frame = 3
Query:    9 TAVQVEETKTFLGLLPIFASTIMMNCCLAQLQTFSVQQGIIMNRTINNFKIPTQSLTVFPLTIMLASIPLYERSVHIFERKISAKYNIFRPLKRIGLGLALASGSMAVAAVVESTRRAAAENH------VTLSVFWLVWQYLLLGVSDMLTLGGMLEFFYSEAPHSMRSISTALSWCSTSMGYFLSSALVSITNLVSGKFGGEWLGGNDLNHARLDLFYALL 656
            T   VEE K  + +LPI+A+ I+     AQL T SV Q   ++R+I +F+IP  S+ VF +  +L +  +Y+R      +K+    +  RPL+RIGLGL   S +MAVAA+VE  R   A  H      + L  + L+ QYL++G+ + L   G L+FF  E P  M+ +ST L   + ++G+F SS LV+I    +GK    W+  +DLN  RL  FY L+
Sbjct:  329 TLTDVEEVKQIVRMLPIWATCILFWTVHAQLTTLSVAQSETLDRSIGSFEIPPASMAVFYVGGLLLTTAVYDRVAIRLCKKLFNYPHGLRPLQRIGLGLFFGSMAMAVAALVELKRLRTAHAHGPTVKTLPLGFYLLIPQYLIVGIGEALIYTGQLDFFLRECPKGMKGMSTGLLLSTLALGFFFSSVLVTIVEKFTGK-AHPWI-ADDLNKGRLYNFYWLV 548          
BLAST of DY256980 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.242e-29
Identity = 82/223 (36.77%), Postives = 125/223 (56.05%), Query Frame = 3
Query:    9 TAVQVEETKTFLGLLPIFASTIMMNCCLAQLQTFSVQQGIIMNRTIN-NFKIPTQSLTVFPLTIMLASIPLYERSVHIFERKISAKYNIFRPLKRIGLGLALASGSMAVAAVVESTRRAAAENH---------VTLSVFWLVWQYLLLGVSDMLTLGGMLEFFYSEAPHSMRSISTALSWCSTSMGYFLSSALVSITNLVSGKFGGEWLGGNDLNHARLDLFY 647
            T  +VEETK  L +LP+   T + +  LAQ+ T  V+QG  ++R +  +F IP  SL+ F    ML SI LY+R      RK +        L+R+G+GL      M VA+V E  R   A +H         + L++F L+ Q++L+G++D       LEFFY +AP SM+S+ T+ S  S ++G F+SS L+S  + ++ K G  W+  N+LN +RLD +Y
Sbjct:  319 TTTEVEETKQMLRMLPVLFITFVPSMMLAQINTLFVKQGTTLDRKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASVTERYRLKVAADHGLIHQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSFLLSTVSEITKKRGRGWI-LNNLNESRLDYYY 540          
BLAST of DY256980 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.568e-22
Identity = 70/229 (30.57%), Postives = 125/229 (54.59%), Query Frame = 3
Query:    9 TAVQVEETKTFLGLLPIFASTIMMNCCLAQLQTFSVQQGIIMNRTIN----NFKIPTQSLTVFPLTIMLASIPLYERSVHIFERKISAKYNIFRPLKRIGLGLALASGSMAVAAVVESTRRAAAENH---------VTLSVFWLVWQYLLLGVSDMLTLGGMLEFFYSEAPHSMRSISTALSWCSTSMGYFLSSALVSITNLVSGKFGGEWLGGNDLNHARLDLFYALL 656
            T  +VEE K  + ++PI+++ IMM+   +Q  +F + Q   M+R ++    +F++P  S  +F +  +   + LY+R+V     KI  +        R+GLGL ++  +MA++A+VES RR  A +          V +S  WLV QY+L G+++ LT  G  EFFY+E P SM SI+ +L     ++   L+S +++  N ++ + G E    +++N    + +Y +L
Sbjct:  321 TTDKVEELKALIKVIPIWSTGIMMSINTSQ-SSFQLLQATSMDRRLSRHGSSFQVPAGSFGMFTIIALALWVILYDRAVIPLASKIRGRPFRLSVKLRMGLGLFMSFLAMAISAMVESFRRKKAISQGYANNSNAVVDISAMWLVPQYVLHGLAEALTAIGQTEFFYTEFPKSMSSIAASLFGLGMAVASLLASVVLNAVNELTSRNGKESWVSDNINKGHYNYYYWVL 548          
BLAST of DY256980 vs. ExPASy Swiss-Prot
Match: S15A4_XENLA (Solute carrier family 15 member 4 OS=Xenopus laevis GN=slc15a4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 63/229 (27.51%), Postives = 111/229 (48.47%), Query Frame = 3
Query:   18 QVEETKTFLGLLPIFASTIMMNCCLAQLQTFSVQQGI---IMNRTINNFKIPTQSLTVFPLTIMLASIPLYERSVHIFERKISAKYNIFRPLKRIGLGLALASGSMAVAAVVESTRRAAAENH-------------VTLSVFWLVWQYLLLGVSDMLTLGGMLEFFYSEAPHSMRSISTALSWCSTSMGYFLSSALVSITNLVSGKFGGEWLGGNDLNHARLDLFYALL 656
            +VE+ K  + ++P+F + I       Q+QT  V Q +   I     NN  +P   LT+F   ++L  IPL ++ V  F +K      +  PLKRI +G+     S+  A ++ES R    +                 L+V+W + QY+L+G+S++      LEF YS AP SM+S+   L +  + +G F+ S L+++ ++    +        ++N   L+ ++ LL
Sbjct:  315 KVEDVKALVKIIPVFLALIPYWTVYFQMQTTYVLQSLHLRIPQIFNNNHTLPAAWLTMFDAVLILILIPLKDKLVDPFLKKRGL---LPSPLKRIAVGMFFVMCSVLAAGILESERLEIVKRDKIQQQIGNVTYYAANLTVWWQLPQYILIGISEIFASIAGLEFAYSAAPKSMQSVIMGLFFFFSGIGSFVGSGLLALVSIPQIGWMSNHSDLGNINGCTLNYYFFLL 540          
BLAST of DY256980 vs. ExPASy Swiss-Prot
Match: S15A4_HUMAN (Solute carrier family 15 member 4 OS=Homo sapiens GN=SLC15A4 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.260e-14
Identity = 64/235 (27.23%), Postives = 109/235 (46.38%), Query Frame = 3
Query:    9 TAVQVEETKTFLGLLPIFASTIMMNCCLAQLQTFSVQQGI------IMNRTINNFKIPTQSLTVFPLTIMLASIPLYERSVHIFERKISAKYNIFRPLKRIGLGLALASGSMAVAAVVESTRRAAAENHVT-------------LSVFWLVWQYLLLGVSDMLTLGGMLEFFYSEAPHSMRSISTALSWCSTSMGYFLSSALVSITNLVSGKFGGEWLGGNDLNHARLDLFYALL 656
            T  +VE+ K  + ++P+F + I       Q+QT  V Q +      I N T     +P   LT+F   ++L  IPL ++ V    R+      +   LKRI +G+     S   A ++ES R    +                 LS++W V QYLL+G+S++      LEF YS AP SM+S    L +  + +G F+ S L+++ ++ +  +        ++N   L+ ++ LL
Sbjct:  308 TEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGL---LPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVKEKTINQTIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIKAIGWMSSHTDFGNINGCYLNYYFFLL 539          
BLAST of DY256980 vs. ExPASy Swiss-Prot
Match: S15A4_RAT (Solute carrier family 15 member 4 OS=Rattus norvegicus GN=Slc15a4 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13
Identity = 61/235 (25.96%), Postives = 109/235 (46.38%), Query Frame = 3
Query:    9 TAVQVEETKTFLGLLPIFASTIMMNCCLAQLQTFSVQQGI------IMNRTINNFKIPTQSLTVFPLTIMLASIPLYERSVHIFERKISAKYNIFRPLKRIGLGLALASGSMAVAAVVESTRRAAAENHVT-------------LSVFWLVWQYLLLGVSDMLTLGGMLEFFYSEAPHSMRSISTALSWCSTSMGYFLSSALVSITNLVSGKFGGEWLGGNDLNHARLDLFYALL 656
            T  +VE+ K  + ++P+F + I       Q+QT  V Q +      I + T  +  +P   LT+F   ++L  IPL ++ V    R+      +   LKRI +G+   + S   A ++ES R    +                 L ++W + QY+L+G+S++      LEF YS AP SM+S    L +  + +G F+ S L+++ +L +  +        ++N   L  ++ LL
Sbjct:  307 TEDKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLKIPEISSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGL---LPSSLKRIAVGMFFVTCSAFAAGILESKRLDLVKEKTINQTIGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLALVSLKAIGWMSSHTDFGNINSCHLHYYFFLL 538          
The following BLAST results are available for this feature:
BLAST of DY256980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PTR3B_ARATH4.100e-3237.22Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
PTR1_ARATH2.035e-3133.06Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH4.533e-3136.73Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR2_ARATH7.732e-3134.38Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
CHL1_ARATH6.545e-3037.84Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PTR3A_ARATH4.242e-2936.77Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
PTR2X_ARATH8.568e-2230.57Probable peptide transporter At1g52190 OS=Arabidop... [more]
S15A4_XENLA3.154e-1627.51Solute carrier family 15 member 4 OS=Xenopus laevi... [more]
S15A4_HUMAN2.260e-1427.23Solute carrier family 15 member 4 OS=Homo sapiens ... [more]
S15A4_RAT1.122e-1325.96Solute carrier family 15 member 4 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA3BD09ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256980 ID=DY256980; Name=DY256980; organism=Citrus clementina; type=EST; length=852bp
ATACCATAACTGCAGTCCAAGTTGAAGAAACAAAGACATTTCTTGGACTG
CTTCCGATATTTGCAAGCACAATCATGATGAACTGCTGCTTAGCACAACT
ACAGACATTCTCAGTGCAACAAGGGATCATCATGAACAGAACAATAAACA
ATTTCAAAATTCCAACCCAATCGTTAACCGTGTTCCCCCTAACCATAATG
TTGGCTTCCATACCATTATACGAACGTTCTGTGCACATCTTCGAAAGGAA
AATTTCAGCAAAGTATAACATTTTCCGGCCTCTTAAGCGGATAGGACTGG
GGCTAGCACTGGCATCAGGGTCCATGGCTGTGGCTGCCGTGGTTGAGTCC
ACGAGGCGGGCTGCCGCAGAAAATCATGTCACGTTGTCTGTGTTTTGGCT
AGTGTGGCAGTATCTTTTGCTTGGGGTATCGGATATGCTCACTCTTGGTG
GGATGCTTGAGTTTTTCTACTCGGAGGCTCCTCACAGTATGAGAAGCATC
AGCACTGCATTGTCTTGGTGCTCAACATCAATGGGATATTTCCTCAGCTC
AGCTCTCGTGTCCATTACCAACTTGGTGAGTGGAAAATTTGGTGGTGAAT
GGCTTGGAGGAAACGATCTGAATCATGCCCGTTTGGATTTGTTCTATGCC
CTGCTTTGCATTCTTAACTTCATAAATTTTTTGAACTATATTTACTGGGC
TAAGAGGTATTGATTATTTGCGGCTTGTCGCTTGGTAATTAGTGTATATC
AACGTATAATTTGCTTTGCTCTCGGGAAAAATTGGGGTTTAAAATTGTTC
ATAAATTTTTGCTTATGCCATAAAAATAAAATAAAGTCAGTTAAGCATTT
CC
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