DY257900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257900 vs. ExPASy Swiss-Prot
Match: FADS2_PONAB (Fatty acid desaturase 2 OS=Pongo abelii GN=FADS2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.044e-22 Identity = 78/271 (28.78%), Postives = 124/271 (45.76%), Query Frame = 3 Query: 180 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAVSTRLFNSITSVFYG-RKLDFDPVARSLVSYQHGHFTLL 962 + AA E + EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I++D+R L +F+ L + + + + V + W + L + +L Q+ ++ HD GH V PK+N + L G S WW H HH N DPD+ + VF + + YG +KL + P ++QH +F L+ Sbjct: 9 EGAAEREVSVPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQRVIGHYAGEDATDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRKTAEDMNLFKTNHVFFLLLLAHIIALESIAWFTVFYFGNGWISTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHLVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDVNMLHVF-----VLGEWQPIEYGKKKLKYLP-----YNHQHEYFFLI 269
BLAST of DY257900 vs. ExPASy Swiss-Prot
Match: FADS2_HUMAN (Fatty acid desaturase 2 OS=Homo sapiens GN=FADS2 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.364e-22 Identity = 83/282 (29.43%), Postives = 130/282 (46.10%), Query Frame = 3 Query: 180 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-W---AHLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAVSTRLFNSITSVFYG-RKLDFDPVARSLVSYQHGHFTLL 962 + AA E + EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I++D+R L +F K HV F++++ ++ ES+ W + G+G +L Q+ ++ HD GH V PK+N + L G S WW H HH N DPD+ + VF + + YG +KL + P ++QH +F L+ Sbjct: 9 EGAAEREVSVPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQRVIGHYAGEDATDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRKTAEDMNLF-KTNHV----------FFLLLLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHLVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDVNMLHVF-----VLGEWQPIEYGKKKLKYLP-----YNHQHEYFFLI 269
BLAST of DY257900 vs. ExPASy Swiss-Prot
Match: FADS2_MACFA (Fatty acid desaturase 2 OS=Macaca fascicularis GN=FADS2 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.781e-22 Identity = 83/282 (29.43%), Postives = 129/282 (45.74%), Query Frame = 3 Query: 180 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-W---AHLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAVSTRLFNSITSVFYG-RKLDFDPVARSLVSYQHGHFTLL 962 + AA E + EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I +D+R L +F K HV F++++ ++ ES+ W + G+G +L Q+ ++ HD GH V PK+N + L G S WW H HH N DPD+ + VF + + YG +KL + P ++QH +F L+ Sbjct: 9 EGAAEREVPMPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSTQHPGGQRVIGHYAGEDATDAFRAFHPDLKFVGKFLKPLLIGELAPEEPSQDHGKNSKIIEDFRALKKTAEDMNLF-KTNHV----------FFLLLLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHLVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDVNMLHVF-----VLGEWQPIEYGKKKLKYLP-----YNHQHEYFFLI 269
BLAST of DY257900 vs. ExPASy Swiss-Prot
Match: FADS3_BOVIN (Fatty acid desaturase 3 OS=Bos taurus GN=FADS3 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.039e-22 Identity = 71/259 (27.41%), Postives = 115/259 (44.40%), Query Frame = 3 Query: 225 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQDF------EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWA-HLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAVSTRLFNSITSVFYGRKLDFDPVARSLVSYQHGHFTLLCVWP 974 E++R HN D W+ I+ +VYD++ WA++HPGG + + +D TDAF A+H ++ ++L L G + + +++ +D+R L +FE K L + M V+ + W + ++L QS + HD GH + + ++N +AQ L G S WW + H HH N DPD+ PVF + +SV YG+K R + Y H H + P Sbjct: 24 EQVRRHNLPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFHAFHQDLSFVRKFLQPLLIGELAPEEPSQDGPQNTQLIEDFRALRQAVEDMKLFEAKPAFFGLLLGHILAMEVLAWLMIYMLGPGWVPSTLAALILAISQAQSWCLQHDLGHTSIFRNSRWNHLAQQFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDVTVAPVFLLGE------SSVEYGKK------KRRYLPYNHQHLYFFLIGP 270
BLAST of DY257900 vs. ExPASy Swiss-Prot
Match: FADS1_PAPAN (Fatty acid desaturase 1 OS=Papio anubis GN=FADS1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.508e-21 Identity = 74/282 (26.24%), Postives = 125/282 (44.33%), Query Frame = 3 Query: 171 PIFQSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQD---FEVS---EISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGV------LCCESVWAHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAVSTRLFNSITSVFYGRKLDFDPVARSLVSYQHGHFTLLCVWP 974 P+ + +Y T +E+ + E+ W+ I KVYD++E+ ++HPGG + + AGQD TD F+A+H G +Y++ L G + FE + E++ ++R L + G+ K HV + L+ ++++ G + S L +LL IQ+ ++ HD GH V ++ K+N + L G+ +WW H HH N DPD+ P F I SV G++ + + Y H H + P Sbjct: 5 PVAAKTPVQGPTPRYFTWDEVAQRSGCEERWLVIDRKVYDISEFTRRHPGGSRVISHYAGQDATDPFVAFHSNKGLVKKYMNSLLIGELSPEQPSFEPTKNKELTDEFRELRATVEQMGLM-KANHV----FFLLYLLHILLLDGAAWLTLWIFGTSFLPFLLCAVLLTAAQIQAGWLQHDLGHLSVFSTSKWNHLVHHFVIGHLKGVPASWWNHMHFQHHAKPNCFGKDPDINMHPFFFA----LGKILSVELGKQ------KKKYMPYNHQHKYFFLIGP 271
BLAST of DY257900 vs. ExPASy Swiss-Prot
Match: FADS2_DANRE (Fatty acid desaturase 2 OS=Danio rerio GN=fads2 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.572e-21 Identity = 72/256 (28.12%), Postives = 114/256 (44.53%), Query Frame = 3 Query: 219 TAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYFVQDFEVSEIS----------KDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWAH-LGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAVSTRLFNSITSVFYGRKLDFDPVARSLVSYQHGHF 953 T EE++ H K D W+ ++ KVY+V++W K+HPGG L + AG+D T+AF A+HP Q + K + + E SE S +D+R L +G F+ + + L + L+ + V + W + L ++L Q+ ++ HD GH V + N + L G S WW H HH N DPD+ + F V ++ V YG K + ++QH +F Sbjct: 22 TWEEVQKHTKHGDQWVVVERKVYNVSQWVKRHPGGLRILGHYAGEDATEAFTAFHPNL--QLVRKYLKPLLIGELEASEPSQDRQKNAALVEDFRALRERLEAEGCFKTQPLFFALHLGHILLLEAIAFMMVWYFGTGWINTLIVAVILATAQSQAGWLQHDFGHLSVFKTSGMNHLVHKFVIGHLKGASAGWWNHRHFQHHAKPNIFKKDPDVNMLNAFVV-----GNVQPVEYGVK----KIKHLPYNHQHKYF 266
BLAST of DY257900 vs. ExPASy Swiss-Prot
Match: FADS3_MOUSE (Fatty acid desaturase 3 OS=Mus musculus GN=Fads3 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 7.484e-21 Identity = 68/259 (26.25%), Postives = 115/259 (44.40%), Query Frame = 3 Query: 225 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQD------FEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAVSTRLFNSITSVFYGRKLDFDPVARSLVSYQHGHFTLLCVWP 974 E++R H+ D W+ I+ +VYD++ WA++HPGG + + +D TDAF A+H + ++L L G + + +++ +D+R L +FE + L + M ++ + W + + + ++L Q + HD GH + T ++N +AQ L G S WW + H HH N DPD+ PVF + +SV YG+K R + Y H H + P Sbjct: 30 EQIRQHDLPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFHAFHQDLHFVRKFLKPLLIGELAPEEPSQDGAQNAQLIEDFRALRQAAEDMKLFEADTTFFALLLGHILAMELLAWLIIYLLGPGWVSSILAALILAISQAQCWCLQHDLGHASIFTKSRWNHVAQQFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDVTVAPVFLLGE------SSVEYGKK------KRRYLPYNHQHLYFFLIGP 276
BLAST of DY257900 vs. ExPASy Swiss-Prot
Match: FADS2_BOVIN (Fatty acid desaturase 2 OS=Bos taurus GN=FADS2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 9.775e-21 Identity = 72/271 (26.57%), Postives = 121/271 (44.65%), Query Frame = 3 Query: 180 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQD------FEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAVSTRLFNSITSVFYG-RKLDFDPVARSLVSYQHGHFTLL 962 + A +EA EE++ HN D W+ I KVY++T+W+ +HPGG + + AG+D TDAF+A+H + +++ L G + + S+I++D+R L +F+ Q L + M + + + + W + + +L Q+ ++ HD GH V +N I L G S WW H HH N DPD+ + VF + + YG +KL + P ++QH +F L+ Sbjct: 9 EGATELEAPMPTFRWEEIQKHNLRTDKWLVIDRKVYNITKWSSRHPGGQRVIGHYAGEDATDAFLAFHRNLDFVRKFMKPLLIGELAPEEPSQDRGKNSQITEDFRALRKTAEDMNLFKSNQLFFLLHLAHIIAMESIAWFTLFYFGNGWIPTIITAFVLATSQAQAGWLQHDYGHLSVYKKSMWNHIVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDVNMLHVF-----VLGEWQPIEYGKKKLKYLP-----YNHQHEYFFLI 269
BLAST of DY257900 vs. ExPASy Swiss-Prot
Match: FADS2_XENLA (Fatty acid desaturase 2 OS=Xenopus laevis GN=fads2 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.277e-20 Identity = 72/270 (26.67%), Postives = 115/270 (42.59%), Query Frame = 3 Query: 225 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQDFEVSEISK------DYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-WA---HLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAVSTRLFNSITSVFYGRKLDFDPVARSLVSYQHGHFTLLCVWP 974 EE++ HN D W+ I+ KVY++++W K+HPGG + + AG+D TDAF A+HP + ++L L+ G ++ + K D+R L +F+ F+ ++ +L E + W +LG+G +LL Q+ ++ HD GH V K+N + L G S WW H HH N DPD+ + VF + V +G+K + Y H H + P Sbjct: 26 EEIQKHNLKTDKWLVIERKVYNISQWVKRHPGGMRIIGHYAGEDATDAFHAFHPDKTFVRKFLKPLYIGELAENEPSQDRDKNAQQVEDFRALRKTAEDMRLFKSN-----------PAFFIFYLFHILLIEFLAWCTLHYLGTGWIPAIITVLLLTISQAQAGWLQHDFGHLSVFEKSKWNHLVHKFVIGHLKGASANWWNHRHFQHHAKPNIFSKDPDVNMVNVF-----VLGGTQPVEFGKK------GIKYLPYNHQHLYFFLIGP 273
BLAST of DY257900 vs. ExPASy Swiss-Prot
Match: FADS1_HUMAN (Fatty acid desaturase 1 OS=Homo sapiens GN=FADS1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.277e-20 Identity = 72/281 (25.62%), Postives = 121/281 (43.06%), Query Frame = 3 Query: 171 PIFQSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQD---FEVS---EISKDYRRLYIEFAKQGMFEKKQ-----HVASCALTCVALMFVVVVYGVLCCESVWAHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAVSTRLFNSITSVFYGRKLDFDPVARSLVSYQHGHFTLLCVWP 974 P+ A +Y T +E+ + E+ W+ I KVY+++E+ ++HPGG + + AGQD TD F+A+H G +Y++ L G + FE + E++ ++R L + G+ + ++ L A + V+G S L +LL + Q+ ++ HD GH V ++ K+N + L G +WW H HH N DPD+ P F I SV G++ + + Y H H + P Sbjct: 5 PVAAETAAQGPTPRYFTWDEVAQRSGCEERWLVIDRKVYNISEFTRRHPGGSRVISHYAGQDATDPFVAFHINKGLVKKYMNSLLIGELSPEQPSFEPTKNKELTDEFRELRATVERMGLMKANHVFFLLYLLHILLLDGAAWLTLWVFGT----SFLPFLLCAVLLSAVQAQAGWLQHDFGHLSVFSTSKWNHLLHHFVIGHLKGAPASWWNHMHFQHHAKPNCFRKDPDINMHPFFFA----LGKILSVELGKQ------KKKYMPYNHQHKYFFLIGP 271 The following BLAST results are available for this feature:
BLAST of DY257900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257900 ID=DY257900; Name=DY257900; organism=Citrus clementina; type=EST; length=1260bpback to top |