DY257911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257911 vs. ExPASy Swiss-Prot
Match: BRXL1_ORYSJ (Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica GN=BRXL1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 253 SQTEASHCEATTKNKNRTMKAEPA--QGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 495 S +S E +++ ++ A Q EWVE+DE GVYIT+ ALPGG+++L+RVRFSR+KFSE A WW NRAR++ QY Sbjct: 314 SMRSSSSPEEVDRSRELSVSVSNASDQEREWVEEDEPGVYITIRALPGGIRELRRVRFSREKFSEMHARLWWEENRARIHDQY 396 HSP 2 Score: 73.9442 bits (180), Expect = 1.344e-12 Identity = 59/177 (33.33%), Postives = 83/177 (46.89%), Query Frame = 1 Query: 28 IKSLTAQLKDMAEMLPVGAVRNSN--SFHSSPTPAWDVSSAAIEQPSSPLTFQG----------AIPXXXXXXXXXXXXDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSS 522 IK+LTAQ+KDMA + GA R+ + SS +PA + A P G A DF + E E TT + +E + EWV Q E GV IT ++LP G DLKR+RFSR+ F++ QA++WWA N +V + YNV ++ + Sbjct: 46 IKALTAQIKDMA-LKASGAYRHCKPCAGSSSSSPA---AGARRHHPYHAYADSGSDRFHYAYRRAGSGGDATPSVSARTDFLAGDEEEEEEEEEEEGTTAD-----GSEDDEAKEWVAQVEPGVLITFLSLPEGGNDLKRIRFSREIFNKWQAQRWWAENYEKVMELYNVQRFNQQT 213
BLAST of DY257911 vs. ExPASy Swiss-Prot
Match: BRXL4_ARATH (Protein Brevis radix-like 4 OS=Arabidopsis thaliana GN=BRXL4 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 247 SPSQTEASHCEATTKN-------KNRTMKAEPAQG--DEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 495 S ++TE S +A+ ++ ++ M A +EWVEQDE GVYIT+ LPGG ++L+RVRFSR++F E A WW NRAR+++QY Sbjct: 292 SVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNEWVEQDEPGVYITIKVLPGGKRELRRVRFSRERFGEMHARLWWEENRARIHEQY 383 HSP 2 Score: 75.0998 bits (183), Expect = 6.033e-13 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 277 EATTKNKNRTMKAEPA------QGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSS 522 EAT K+ + + +P + EWV Q E GV IT V+LPGG DLKR+RFSR F++ QA++WWA N +V + YNV + + + Sbjct: 126 EATPKSASGRNRVDPIVFVEEKEPKEWVAQVEPGVLITFVSLPGGGNDLKRIRFSRDMFNKLQAQRWWADNYDKVMELYNVQKLSRQA 213
BLAST of DY257911 vs. ExPASy Swiss-Prot
Match: BRXL2_ARATH (Protein Brevis radix-like 2 OS=Arabidopsis thaliana GN=BRXL2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.935e-15 Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 1 Query: 334 EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 495 EWVEQDE GVYIT+ ALP G ++L+RVRFSR+KF E A WW NRAR+ QQY Sbjct: 320 EWVEQDEAGVYITIRALPDGTRELRRVRFSREKFGETNARLWWEQNRARIQQQY 373 HSP 2 Score: 75.0998 bits (183), Expect = 6.033e-13 Identity = 56/177 (31.64%), Postives = 82/177 (46.33%), Query Frame = 1 Query: 28 IKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAI---------PXXXXXXXXXXXXDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSI 531 IKSLT+Q+KDMA + GA ++ S + S A + S+ F+ A P F ++ + E+T E + EWV Q E GV IT V+LP G D+KR+RFSR+ F + QA++WWA N +V + YNV ++ SV + Sbjct: 40 IKSLTSQIKDMA-VKASGAYKSCKPCSGSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSSTPKILGKEMESRLKGFLSGEGTPESMSGRTESTV------FMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMFDKWQAQKWWAENFDKVMELYNVQQFNQQSVPL 209
BLAST of DY257911 vs. ExPASy Swiss-Prot
Match: BRXL3_ARATH (Protein Brevis radix-like 3 OS=Arabidopsis thaliana GN=BRXL3 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.100e-14 Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 247 SPSQTEASHCEATTKNKNRTMKAEPAQGD------EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 495 S ++TE S + + ++ + E + + EWVEQDE G+YIT+ ALP G ++L+RVRFSR KF E A WW NRAR+ QQY Sbjct: 281 SGTKTETSSTDGSARSSSVDRSEEVSVSNASDMESEWVEQDEPGIYITIRALPDGNRELRRVRFSRDKFGETHARLWWEQNRARIQQQY 369
BLAST of DY257911 vs. ExPASy Swiss-Prot
Match: BRXL1_ARATH (Protein Brevis radix-like 1 OS=Arabidopsis thaliana GN=BRXL1 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.588e-13 Identity = 51/173 (29.48%), Postives = 84/173 (48.55%), Query Frame = 1 Query: 22 DVIKSLTAQLKDMAEMLPVGAVRN-----SNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPXXXXXXXXXXXXDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSV 525 + +KSLT Q+KDMA ++ S+S + P +D +S ++ P P + P D+R S + ++ + + E + EW+ Q E GV+IT V+LP G DLKR+RFSR+ F + QA++WW N R+ + YNV ++ ++ Sbjct: 32 EAVKSLTTQIKDMASKFSGSHKQSKPTPGSSSSNLRKFPDFDTASESVPYPY-PGGSTSSTPAWDLPRSSYHQSGRPDSRFTSMYGGERESISAQSCDVVL--EDDEPKEWMAQVEPGVHITFVSLPSGGNDLKRIRFSREVFDKWQAQRWWGENYDRIVELYNVQRFNRQAL 201 HSP 2 Score: 75.0998 bits (183), Expect = 6.033e-13 Identity = 33/78 (42.31%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 262 EASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 495 +A+ +++++ +M EWVE+DE GVYIT+ LP G ++L+RVRFSR++F E A+ WW NR R+ QY Sbjct: 253 DAARITTSSRDEPPSMSNASEMQGEWVEEDEPGVYITIRQLPDGTRELRRVRFSRERFGEVHAKTWWEQNRDRIQTQY 330
BLAST of DY257911 vs. ExPASy Swiss-Prot
Match: BRX_ARATH (Protein BREVIS RADIX OS=Arabidopsis thaliana GN=BRX PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11 Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 262 EASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 495 +A+ ++++ +M EW+E+DE GVYIT+ L G ++L+RVRFSR++F E A+ WW NR R+ QY Sbjct: 266 DAARTTTSSRDDPPSMSNASEMQAEWIEEDEPGVYITIRQLSDGTRELRRVRFSRERFGEVHAKTWWEQNRERIQTQY 343
BLAST of DY257911 vs. ExPASy Swiss-Prot
Match: BRXL2_ORYSJ (Protein Brevis radix-like 2 OS=Oryza sativa subsp. japonica GN=BRXL2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11 Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 1 Query: 259 TEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 495 T +S EA+ N A + EWVEQDE GV IT+ G ++L+RVRFSR++F E++A+ WW NR R++ QY Sbjct: 336 TTSSRDEASVSISN----ASDLEATEWVEQDEPGVSITIREFGDGTRELRRVRFSRERFGEERAKVWWEQNRDRIHAQY 410
BLAST of DY257911 vs. ExPASy Swiss-Prot
Match: BRXL3_ORYSJ (Putative protein Brevis radix-like 3 OS=Oryza sativa subsp. japonica GN=BRXL3 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11 Identity = 60/187 (32.09%), Postives = 76/187 (40.64%), Query Frame = 1 Query: 22 DVIKSLTAQLKDMAEMLP--------VGAVRNSNSFHSS----PTPAWDVSSAAIEQPSSP----LTFQGAIPXXXXXXXXXXXXDFGDNRSPS----QTEASHCEATTK---------NKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 495 D +KSLT+QLKDM A S SF S P P + + +A + P + A P + RS S Q +A T + E A EW Q E GV IT V LPGG DLKR+RFSR++F E +A+ WW NR R+ QY Sbjct: 27 DAVKSLTSQLKDMVLKFSGSNKHQHYKAATAGSPSFRSRSYRRPYPGF-IDDSAFMTTTRPGGEAYMYTRAAPPPPVRAASTSMATWDMTRSKSNRGWQQDAGRSPGGTTWIQSIEEEAGADDVTVVEDAVPREWTAQVEPGVQITFVTLPGGGNDLKRIRFSRERFGEDRAKVWWEHNRDRIQAQY 212
BLAST of DY257911 vs. ExPASy Swiss-Prot
Match: BRXL4_ORYSJ (Protein Brevis radix-like 4 OS=Oryza sativa subsp. japonica GN=BRXL4 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.375e-11 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 313 AEPAQGD--EWVEQDETGVYITLVALPGGL-KDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNV 501 A PA+G+ EWV Q E GV IT V+L GG DLKR+RFSR+ + + QA++WW N R+ + YNV Sbjct: 78 ARPAEGEAREWVAQVEPGVQITFVSLAGGGGNDLKRIRFSREMYDKWQAQKWWGENNERIMELYNV 143 HSP 2 Score: 67.781 bits (164), Expect = 9.632e-11 Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 247 SPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 495 S + A +++++ A + EWV QDE GVYIT+ L G ++L+RVRFSR++F+E A+ WW N+ R+ QY Sbjct: 246 SDAMDAARTTSCSSRDEVSISNASELEVTEWVIQDEPGVYITVRELADGTRELRRVRFSRERFAELNAKLWWEENKERIQAQY 328 The following BLAST results are available for this feature:
BLAST of DY257911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257911 ID=DY257911; Name=DY257911; organism=Citrus clementina; type=EST; length=891bpback to top |