DY258036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG2_PHOLL (Pseudouridine-5'-phosphate glycosidase 2 OS=Photorhabdus luminescens subsp. laumondii GN=psuG2 PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 2.669e-72 Identity = 136/258 (52.71%), Postives = 177/258 (68.60%), Query Frame = 1 Query: 100 SLAKNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 +++ + ISPEV+EAL + VVALESTII+HGMPYPQN +TA +VE +R NGAVPATIA++ G+ GLS EE+ LA+ G + K +RRD+ V+A NGATTV++TM A+M GI +F TGGIGGVHR E T DIS+DL+EL +T VAVV AG KSILD+ T EYLETHGV + Y+T+ PAFF TS V R+DSPE A+ + V L G+V+ PIP +A I +AI+ A+RE+ E+ Sbjct: 5 AISNKYLDISPEVTEALENNRPVVALESTIIAHGMPYPQNVKTALQVEQKIRENGAVPATIAVINGMMKAGLSHEEIAFLARKGDEITKVSRRDLPFVIAAGKNGATTVASTMIIAAMAGIRIFATGGIGGVHRGAEQTFDISADLQELAKTSVAVVCAGAKSILDLGLTTEYLETHGVPLIGYQTHALPAFFCRTSPFSVNIRLDSPEQIAQAMAVKWDTGLQGGLVVANPIPEPYAMPEAEISAAIEQAVRESIEQ 262 HSP 2 Score: 35.4242 bits (80), Expect = 2.669e-72 Identity = 19/34 (55.88%), Postives = 22/34 (64.71%), Query Frame = 3 Query: 876 ITGNAETPFLLARVNDLTGGFSLPQTFAL*KINA 977 + G A TPFLLARV++LTGG SL L NA Sbjct: 264 VNGKACTPFLLARVSELTGGNSLSSNIQLVLNNA 297
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_HAHCH (Pseudouridine-5'-phosphate glycosidase OS=Hahella chejuensis (strain KCTC 2396) GN=psuG PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 2.914e-71 Identity = 137/250 (54.80%), Postives = 174/250 (69.60%), Query Frame = 1 Query: 124 ISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 ISPEV AL+ G VVALESTIISHGMP+PQN ETA +VE IVR+NGAVPATIAI++G VGLS EE+E L K G K +RRDI ++A G+GATTV++TM A+M G+ VF TGGIGGVHR + T DIS+DL+EL T VAV+ AG KSILD+ T EYLETHGV + Y+T+ PAF+T S V ++D+PE A+ + ++ L G+VI PIP +A I++AI +AL E +K Sbjct: 7 ISPEVQTALAAGEPVVALESTIISHGMPWPQNAETALQVEQIVRDNGAVPATIAIIKGRLKVGLSKEEIEYLGKAGLNVTKASRRDIPFIIARGGDGATTVASTMILAAMAGVKVFATGGIGGVHRGAQETFDISADLQELAHTNVAVICAGAKSILDLGLTREYLETHGVPLVGYQTSTLPAFYTRDSDFDVDYQLDTPEQIAQALQAKWEMGLQGGVVIANPIPEAYAMDRGKIDAAISAALAEMDDK 256 HSP 2 Score: 31.187 bits (69), Expect = 2.914e-71 Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 3 Query: 876 ITGNAETPFLLARVNDLTGGFSLPQTFAL 962 ++G TPFLLA+V ++TGG SL L Sbjct: 258 VSGKDSTPFLLAKVAEITGGDSLKANIQL 286
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_SORC5 (Pseudouridine-5'-phosphate glycosidase OS=Sorangium cellulosum (strain So ce56) GN=psuG PE=3 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 5.496e-71 Identity = 142/250 (56.80%), Postives = 179/250 (71.60%), Query Frame = 1 Query: 109 KNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALR 858 K+ + IS EV +AL+ G VVALESTII+HGMPYPQN E + VEA+VR NGAVPATIAI++G VG+ E+LERLA+ G KA K +RRD+A ++ G TTV+ TM A+ GI VF TGGIGGVHR E T DIS+DL+EL +T VAVV AG KSILDIP+TLE LETHGV V YKT +FPAF+ SG KV R++S E+ AR+I + +L +G G+++ PIP HA R IE+ I+ A+R Sbjct: 4 KDHLSISSEVRKALAGGRPVVALESTIITHGMPYPQNLEMVRRVEAVVRRNGAVPATIAIMDGKLRVGVKGEDLERLARGGGKAAKASRRDVAALLVLGGMAGTTVATTMMAAAWAGIQVFATGGIGGVHRGAETTFDISADLEELSQTQVAVVCAGAKSILDIPKTLETLETHGVPVLGYKTEDFPAFWARQSGQKVDHRIESAEEAARVIALQFELGMG-GVLVANPIPESHAMDARAIEARIEEAIR 252
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_CLOBL (Pseudouridine-5'-phosphate glycosidase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=psuG PE=3 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 3.179e-70 Identity = 139/257 (54.09%), Postives = 175/257 (68.09%), Query Frame = 1 Query: 103 LAKNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 + + ++IS EVSEAL VVALESTIISHGMPYP+N ETA VE I+R+ GA+PATIAIL G VGL+ +E+E L K G + KT+RRDI ++A + +GATTV++TM A++ GI VF TGGIGGVHR + + DIS+DL+EL T VAVV AG KSILDI TLEYLET GV V + T E PAF+T SG KV RVD+ ++ A + L L G+V+G PIP E+ I AI A++EA EK Sbjct: 1 MLEKYLEISKEVSEALKENKPVVALESTIISHGMPYPKNAETALNVEKIIRDKGAIPATIAILNGKLKVGLTKDEIEYLGKKGKEVVKTSRRDIPFILAKKLDGATTVASTMIVANLAGIKVFGTGGIGGVHRGAQESFDISADLQELANTNVAVVCAGAKSILDIGLTLEYLETQGVPVVGFGTEELPAFYTRKSGFKVDYRVDTAKELAEALKAKWDLGLKGGMVVGNPIPEEYQMDYDTITKAINDAVKEAEEK 257 HSP 2 Score: 30.4166 bits (67), Expect = 3.179e-70 Identity = 15/29 (51.72%), Postives = 17/29 (58.62%), Query Frame = 3 Query: 876 ITGNAETPFLLARVNDLTGGFSLPQTFAL 962 I G TPFLLA+V D+T G SL L Sbjct: 259 IKGKESTPFLLAKVKDITKGKSLEANIQL 287
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_RHOCS (Pseudouridine-5'-phosphate glycosidase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=psuG PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 4.145e-70 Identity = 139/251 (55.38%), Postives = 174/251 (69.32%), Query Frame = 1 Query: 112 NLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREA 864 + + I PEV+ AL G VVALEST+ISHG+P P N ETA+ +EA VR NGAVPATIA+L+G VGL E+++RLA G+ K +RRD+ V+A +GATTV+ATM A + GI VF TGGIGGVHR E T DIS+DL+EL T VAVV AG K+ILD+PRTLEYLET GV V + T+ FPAF+ SG V R D+PED AR+++ +L L GIV+ VPIP E A E+A+Q A+ EA Sbjct: 3 DFLSIHPEVAAALKAGRPVVALESTLISHGLPAPANLETAQAIEAAVRANGAVPATIAVLDGRIRVGLDAEDMQRLAAPGTA--KVSRRDLPLVLAKGADGATTVAATMIAADLAGIAVFATGGIGGVHRGVETTGDISADLEELATTSVAVVCAGAKAILDLPRTLEYLETRGVPVVGFGTDAFPAFYHRDSGLPVDGRCDTPEDAARVLNAKWRLGLAGGIVVAVPIPDEAALDAAQAEAAVQQAVAEA 251 HSP 2 Score: 31.187 bits (69), Expect = 4.145e-70 Identity = 18/34 (52.94%), Postives = 20/34 (58.82%), Query Frame = 3 Query: 876 ITGNAETPFLLARVNDLTGGFSLPQTFAL*KINA 977 + G A TPFLL R+ LTGG SL AL NA Sbjct: 256 VRGKALTPFLLHRLETLTGGASLTANRALLLNNA 289
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_ECOLI (Pseudouridine-5'-phosphate glycosidase OS=Escherichia coli (strain K12) GN=psuG PE=1 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 7.050e-70 Identity = 136/254 (53.54%), Postives = 169/254 (66.54%), Query Frame = 1 Query: 103 LAKNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREA 864 ++ L++ISPEV +AL + VVALESTIISHGMP+PQN +TA EVE +R GAVPATIAI+ G+ VGLS EE+E L + G K +RRD+ VVA NGATTV++TM A++ GI VF TGGIGGVHR EHT DIS+DL+EL T V VV AG KSILD+ T EYLET GV + Y+T PAFF TS V R+DS + AR + V + L G+V+ PIP + A I +AI A+ EA Sbjct: 6 ISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSPFDVSIRLDSASEIARAMVVKWQSGLNGGLVVANPIPEQFAMPEHTINAAIDQAVAEA 259 HSP 2 Score: 35.039 bits (79), Expect = 7.050e-70 Identity = 19/40 (47.50%), Postives = 23/40 (57.50%), Query Frame = 3 Query: 870 EDITGNAETPFLLARVNDLTGGFSLPQTFAL*KINALYRS 989 + + G TPFLLARV +LTGG SL L NA+ S Sbjct: 262 QGVIGKESTPFLLARVAELTGGDSLKSNIQLVFNNAILAS 301
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_SOLUE (Pseudouridine-5'-phosphate glycosidase OS=Solibacter usitatus (strain Ellin6076) GN=psuG PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 7.053e-70 Identity = 137/250 (54.80%), Postives = 174/250 (69.60%), Query Frame = 1 Query: 118 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSK-AQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREA 864 +KI PEV AL VVALESTII+HGMPYP+N TA+ +E+ VR GAVPATIA++ G+ CVGLS +ELE LA G+K K +R D+ + +AT+ GATTV+ATM A++ GI +F TGGIGGVHR E T DIS+DL+E RT VAVV AG K+ILD+P+TLEYLET GV V AY T+EFPAF++ SG K P R+D+P + AR ++V L L G VI P+P E + + I SA+ EA Sbjct: 3 LKIDPEVRRALQGKRPVVALESTIITHGMPYPENLATARSLESQVRAGGAVPATIAVIGGVICVGLSDKELEWLA--GAKNVLKLSRNDLPYAIATQKIGATTVAATMIAANLAGIRIFATGGIGGVHRGAETTFDISADLEEFARTSVAVVCAGAKAILDLPKTLEYLETRGVPVIAYGTDEFPAFWSRQSGLKAPLRLDTPAEIARFLEVKWSLNLTGGAVICNPVPAEDEIPFHEMRTFIDSAVDEA 250 HSP 2 Score: 34.6538 bits (78), Expect = 7.053e-70 Identity = 18/34 (52.94%), Postives = 23/34 (67.65%), Query Frame = 3 Query: 876 ITGNAETPFLLARVNDLTGGFSLPQTFAL*KINA 977 I G A TP++LAR+ +LTGG SL AL + NA Sbjct: 255 IKGKAVTPYILARIVELTGGRSLRTNMALAQNNA 288
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_THETN (Pseudouridine-5'-phosphate glycosidase OS=Thermoanaerobacter tengcongensis GN=psuG PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 9.195e-70 Identity = 140/249 (56.22%), Postives = 170/249 (68.27%), Query Frame = 1 Query: 118 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREA 864 + +S EV AL VVALESTIISHGMPYPQN ETA+ +E IVR NGAVPATIAI+ G +GL+ EELE + + K ++RD+ V+A N ATTVSATM A++ GI VFVTGGIGGVHR E T DIS+DL+EL T VAVV AG K+ILD+PRTLEYLET GV V ++T EFPAF+T SG KV RV+ + A++I L L GI+I PIP E+A IE AI+ A+ EA Sbjct: 5 IDLSEEVKSALEERRPVVALESTIISHGMPYPQNIETARALEEIVRENGAVPATIAIIGGKIKIGLNEEELEFMGT-SKEILKASKRDLPVVLAKGLNAATTVSATMICANLAGIKVFVTGGIGGVHRGAEETFDISADLQELANTNVAVVCAGAKAILDLPRTLEYLETFGVPVIGFRTEEFPAFYTRESGLKVDYRVEDEVEAAKVIKTKWDLGLKGGILIANPIPEEYALDRAYIEKAIEEAIFEA 252 HSP 2 Score: 32.7278 bits (73), Expect = 9.195e-70 Identity = 18/34 (52.94%), Postives = 20/34 (58.82%), Query Frame = 3 Query: 876 ITGNAETPFLLARVNDLTGGFSLPQTFAL*KINA 977 I G A TPFLL ++ DLT G SL L K NA Sbjct: 257 IRGKALTPFLLEKIKDLTEGKSLKANIELVKNNA 290
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_GEOKA (Pseudouridine-5'-phosphate glycosidase OS=Geobacillus kaustophilus GN=psuG PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 9.197e-70 Identity = 132/249 (53.01%), Postives = 173/249 (69.48%), Query Frame = 1 Query: 127 SPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 S EV++A + +VALESTIISHGMPYP+N +TAK+VE I+R+ GAVPATIAI +GL+ ELE+L +K +RRD+ +VVA + +GATTV+ TM A M GI VF TGGIGGVHR E TMDIS+DL+EL RT VAVV AG KSILD+ TLEYLETHGV V Y+T+ PAF++ TS +V R+DS ++ A+ ++ KL L G+VI P+P+E I + I+ AL+EA ++ Sbjct: 8 SEEVAQAKAEKKPIVALESTIISHGMPYPENVQTAKDVERIIRDRGAVPATIAIFNEKIKIGLTEGELEQLGT-SHDVEKVSRRDLPYVVAMKKHGATTVAGTMICAEMAGIRVFATGGIGGVHRGAEQTMDISADLQELARTNVAVVCAGAKSILDLGLTLEYLETHGVPVIGYQTDVLPAFYSRTSPFRVDYRLDSAKEIAQFLETKWKLGLNGGVVIANPVPKEEELEESYITAIIEQALKEAEKQ 255 HSP 2 Score: 38.1206 bits (87), Expect = 9.197e-70 Identity = 21/36 (58.33%), Postives = 23/36 (63.89%), Query Frame = 3 Query: 870 EDITGNAETPFLLARVNDLTGGFSLPQTFAL*KINA 977 + ITG + TPFLL RV LTGG SL AL K NA Sbjct: 255 QHITGKSVTPFLLDRVKTLTGGKSLQANIALVKNNA 290
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_METNO (Pseudouridine-5'-phosphate glycosidase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=psuG PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 1.705e-68 Identity = 131/251 (52.19%), Postives = 167/251 (66.53%), Query Frame = 1 Query: 115 LVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAR 867 L+ +PEV AL G VVALESTI++HGMP+PQN ETA+ V A+VR NGAVPA +A++ G +GL E L+ L + K +R D+ H VA +G+TTV+ATM A GI VF TGGIGGVHR E T+DIS+DL EL RTPVAVV AG K+ILD+PRTLEYLET GV V Y+T+ FPAF++ SG P R+D+PE A L+ L LG GI++ P+P R I + I +A+ +AR Sbjct: 5 LLDFAPEVRSALDAGAPVVALESTIVTHGMPHPQNVETARAVAAVVRANGAVPAIVAVVAGRIRIGLPEEILDWLGT-AKEVLKLSRADLPHAVAAGLHGSTTVAATMICAHRAGIRVFATGGIGGVHRGVEETLDISADLDELARTPVAVVCAGAKAILDLPRTLEYLETRGVPVVGYRTDRFPAFWSRDSGLPAPLRLDTPEAIAALMRTKEALDLGGGILVANPVPEADEIPAREIAALIATAVAQAR 254 HSP 2 Score: 38.5058 bits (88), Expect = 1.705e-68 Identity = 21/34 (61.76%), Postives = 23/34 (67.65%), Query Frame = 3 Query: 876 ITGNAETPFLLARVNDLTGGFSLPQTFAL*KINA 977 I G A TPFLL+R+ DLTGG SL AL K NA Sbjct: 258 IAGKAVTPFLLSRLLDLTGGRSLSTNIALVKNNA 291 The following BLAST results are available for this feature:
BLAST of DY258036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258036 ID=DY258036; Name=DY258036; organism=Citrus clementina; type=EST; length=1172bpback to top |