DY258135

Overview
NameDY258135
Unique NameDY258135
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1313
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9977 contig Ccv1_Contig9977:4..1316. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258135 vs. ExPASy Swiss-Prot
Match: GDE1_YEAST (Glycerophosphodiester phosphodiesterase GDE1 OS=Saccharomyces cerevisiae GN=GDE1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.805e-23
Identity = 81/278 (29.14%), Postives = 126/278 (45.32%), Query Frame = 3
Query:  246 VMGHRGSGMNMLRSSDQRMKSMKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEG----EIIEKRVTDITLA--EFLSYGPQNDPENV-GKPMLRKTKDGRIFE----------WKVEKDTP-------------------------------------LCTLQEAFEKVDQSVGFNVELKF-------DDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTYTDVKRSSLDEAIK 896
            V+GHRG G N    S Q    + ENT+ SF  AA     ++EFDVQ+T+D  PV++HD  +          E+  ++  D+  A  E +  G  + P +V G     +   GR  +          W +  + P                                       TL+E F+K+  +VGFN+E KF       +++L     E+ H ++ +LKVVF++A GR I+FSSF PD  +++   Q   P+ FLT GG++   D++ SSL   I+
Sbjct:  874 VIGHRGLGKNNPNKSLQ----IGENTVESFIMAASLGASYVEFDVQLTKDNVPVVYHDFLVAETGVDIPMHELTLEQFLDLNNADKEHIQRGAGHSPHHVNGADTALQKYRGRSVDDSDVSTLRRAWDLHDNDPNGKSNNAHWSDNRMRLTKTFKKNNFKGNARGHSIASSFVTLKELFKKIPANVGFNIECKFPMLDEAEEEELGQIMMEMNHWVDTVLKVVFDNANGRDIIFSSFHPDICIMLSLKQPVIPILFLTEGGSEQMADLRASSLQNGIR 1147          
BLAST of DY258135 vs. ExPASy Swiss-Prot
Match: GDE1_ASHGO (Glycerophosphodiester phosphodiesterase GDE1 OS=Ashbya gossypii GN=GDE1 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.131e-21
Identity = 74/272 (27.21%), Postives = 130/272 (47.79%), Query Frame = 3
Query:  246 VMGHRGSGMNMLRSSDQRMKSMKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRVT----------------------------------DITLAEFL--SYGPQNDPENVGKPM-------LRKTKDGRIFEWKVEKD-----TPLCTLQEAFEKVDQSVGFNVELKF-------DDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTYTDVKRSSLDEAIK 896
            V+GHRG G NM   +  +   + ENT+ SF AAA     ++EFDVQ+T+D  P + + +F+  +   +I    +T                                  D + AE +  S   + D +   + +       +R T+  +   +K         +   TL+E F+K+ Q+VGFN+E K+       ++ +     E+ H ++ +L+VV+++ +GR ++FSSFQPD  L++   Q ++P+ FLT GG     D++ +SL  AI+
Sbjct:  974 VIGHRGLGKNM---NTNKSLQLGENTVESFIAAASLGASYVEFDVQLTKDNIP-VVYHDFLVAESGVDIPMHELTLEQFLDLNGERQRHQDAREAHRNHRSPNGRRLSMDDSSAELIKRSLMMRGDEDRTARDLNTIYGDRMRLTRTFKKNAFKANSRGHAIASSFVTLKELFKKIPQNVGFNIECKYPMVDEAEEEDIGPIAVEMNHWIDTVLEVVYDNVEGRDVIFSSFQPDVCLMLSLKQPSFPILFLTEGGTAKRCDIRAASLQNAIR 1241          

HSP 2 Score: 20.7866 bits (42), Expect = 1.131e-21
Identity = 9/30 (30.00%), Postives = 16/30 (53.33%), Query Frame = 2
Query:  992 LCLVSYGELTKWPKVVDLPRFRGIEGVLVD 1081
            L  V+YG     P++  +    G++ V+VD
Sbjct: 1273 LVCVTYGVENNDPEIARVEMDAGVDAVIVD 1302          
BLAST of DY258135 vs. ExPASy Swiss-Prot
Match: YRS7_CAEEL (Uncharacterized protein T05H10.7 OS=Caenorhabditis elegans GN=T05H10.7 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.727e-21
Identity = 83/249 (33.33%), Postives = 119/249 (47.79%), Query Frame = 3
Query:  249 MGHRGSGMNMLRSSDQRMKSMKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFT---KDEGEIIEKRVTDITL-AEFLSYG--PQNDP----------ENVGKPMLRKTKDGRIFEWKVEKD-TPLCTLQEAFEKVDQSVGFNVELKFDDQLVYTEEELTHALE------AILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTYT---DVKRSSLDEAIKVCLAGEL 917
            +GHRG+G     +S  +    +ENTI S N AA++  D++EFDVQ+T+D   VI+HD  +     + +G  +   +T   L +  L Y   P  D           +++  P  ++     +   + E+D  P  TL EA  KVD  VGFNVE+K+       E E  H  E       IL  V +HA  R IMFSSF PD   ++   Q+ YPV FL  G  Q YT   D + S+   A+      +L
Sbjct:  404 VGHRGAG-----NSYTKFAMARENTIHSLNTAAKNGADYVEFDVQLTKDRIAVIYHDFHVLVSVARRDGLAMPPPMTREQLDSSNLDYHELPVKDLKLSQLKLLMLDHLSFPQKKENVKKLVEAGEEEEDFKPFPTLLEALTKVDPDVGFNVEVKYPMMQNNGEHECDHYFERNLFVDVILADVMKHAGNRRIMFSSFDPDICSMVATKQNKYPVLFLCVGETQRYTPFQDQRTSTSMTAVNFAAGADL 647          
BLAST of DY258135 vs. ExPASy Swiss-Prot
Match: GDE1_SCHPO (Glycerophosphodiester phosphodiesterase gde1 OS=Schizosaccharomyces pombe GN=gde1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.562e-21
Identity = 79/276 (28.62%), Postives = 132/276 (47.83%), Query Frame = 3
Query:  186 KGVNEDGVETKSGYKFPKFVVMGHRGSGMNMLRSSDQRMKSMKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRVTDITLAEFL--SYGPQNDPENVGKPMLRKTK----------------------DGRIFEWKVEKDT--------PLCTLQEAFEKVDQSVGFNVELKF-------DDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTYTDVKRSSLDEAIK 896
            + +++    T    K     V+GHRG G N     D+    + ENT+ SF  AA     ++E DVQ+T+D  PV++HD  +   + G   + +V  +TL +FL  S+ P  + ++    + +K +                      +    + KV K          P  TL++  ++V QSVG NVE K+       +++L+    +    ++ IL ++ ++   R  +FSSF PD  +L+  L+ST PV FLT GG    TDV+ +SL +A+K
Sbjct:  729 RSLHKSATTTSESGKSNGVAVIGHRGLGKNQ---PDRLSLQLGENTLQSFIKAADLGASYVELDVQMTKDMVPVVYHDFIV--NETGT--DAQVHSLTLEQFLGASHSPSEEIKDDASDIQQKRRPRAYSSSFTPSGSQVNFGEFAEENARLKPKVYKGNALGHTICAPFTTLKDVLKEVPQSVGLNVEFKYPMLSEAEEEKLLPIAYDYNFYVDTILSIIKKYGGKRKYIFSSFNPDICILL-SLKSTNPVLFLTEGGTAYRTDVRAASLRQALK 996          
BLAST of DY258135 vs. ExPASy Swiss-Prot
Match: GDE5_MOUSE (Putative glycerophosphodiester phosphodiesterase 5 OS=Mus musculus GN=Gde5 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.954e-19
Identity = 66/225 (29.33%), Postives = 115/225 (51.11%), Query Frame = 3
Query:  249 MGHRGSGMNMLRSSDQRMKSMKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFI-------FTKDEGEIIEKRVTDITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVE----KDTPLCTLQEAFEKVDQSVGFNVELKFD--------DQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTYTDV 866
            +GHRG+G +   ++  ++  ++ENTI S   AA H   F+EFDV +++D  PV++HD          +  D  E+ E  V ++T  +            +      KTKD +   ++ E    ++ P  +L+   E + ++VGFN+E+K+         D  + T  ++   L+ ILK V E++  R I+FSSF  D   ++R+ Q+ YP+ FLT G +  Y ++
Sbjct:  324 VGHRGAGNS---TTTAKLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKRKYEADPVELFEIPVKELTFDQLQLL-------KLSHVTALKTKDRKQSLYEEENFFSENQPFPSLKMVLESLPENVGFNIEIKWICQHRDGVWDGNLSTYFDMNVFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPEL 538          
BLAST of DY258135 vs. ExPASy Swiss-Prot
Match: GDE5_RAT (Putative glycerophosphodiester phosphodiesterase 5 OS=Rattus norvegicus GN=Gde5 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 4.354e-19
Identity = 66/225 (29.33%), Postives = 113/225 (50.22%), Query Frame = 3
Query:  249 MGHRGSGMNMLRSSDQRMKSMKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFI-------FTKDEGEIIEKRVTDITLAEFLSYGPQNDPENVGKPMLRKTKDGRIF----EWKVEKDTPLCTLQEAFEKVDQSVGFNVELKFD--------DQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTYTDV 866
            +GHRG+G +   ++  ++  ++ENTI S   AA H   F+EFDV +++D  PV++HD          +  D  E+ E  V ++T  +            +      KTKD +      E    ++ P  +L+   E + ++VGFN+E+K+         D  + T  ++   L+ ILK V E++  R I+FSSF  D   ++R+ Q+ YP+ FLT G +  Y ++
Sbjct:  321 VGHRGAGNS---TTTAKLAKVQENTIASLRNAASHGAAFVEFDVHLSKDLVPVVYHDLTCCLTMKRKYEADPVELFEIPVKELTFDQLQLL-------KLSHVTALKTKDQKQCMAEEENSFSENQPFPSLKMVLESLPENVGFNIEIKWICQHRDGVWDGNLSTYFDMNAFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYPEL 535          
BLAST of DY258135 vs. ExPASy Swiss-Prot
Match: GDE5_HUMAN (Putative glycerophosphodiester phosphodiesterase 5 OS=Homo sapiens GN=GDE5 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 7.427e-19
Identity = 74/261 (28.35%), Postives = 129/261 (49.43%), Query Frame = 3
Query:  144 GNVTLNYLHSPRVCKGVNEDGVETKSGYKFPKFVV-MGHRGSGMNMLRSSDQRMKSMKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFI-------FTKDEGEIIEKRVTDITLAEFLSYGPQNDPENVGKPMLRKTKDGRIF----EWKVEKDTPLCTLQEAFEKVDQSVGFNVELKFD--------DQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGGAQTYTDV 866
            G V ++Y+   +   G + D   + S Y  P+  + +GHRG+G +   ++  ++  ++ENTI S   AA H   F+EFDV +++D  PV++HD          F  D  E+ E  V ++T  +            +      K+KD +      E    ++ P  +L+   E + + VGFN+E+K+         D  + T  ++   L+ ILK V E++  R I+FSSF  D   ++R+ Q+ YP+ FLT G ++ Y ++
Sbjct:  286 GKVRVDYIII-KPLPGYSCDMKSSFSKYWKPRIPLDVGHRGAGNS---TTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLL-------KLTHVTALKSKDRKESVVQEENSFSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMNLFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSEIYPEL 535          
The following BLAST results are available for this feature:
BLAST of DY258135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
GDE1_YEAST3.805e-2329.14Glycerophosphodiester phosphodiesterase GDE1 OS=Sa... [more]
GDE1_ASHGO1.131e-2127.21Glycerophosphodiester phosphodiesterase GDE1 OS=As... [more]
YRS7_CAEEL2.727e-2133.33Uncharacterized protein T05H10.7 OS=Caenorhabditis... [more]
GDE1_SCHPO3.562e-2128.62Glycerophosphodiester phosphodiesterase gde1 OS=Sc... [more]
GDE5_MOUSE1.954e-1929.33Putative glycerophosphodiester phosphodiesterase 5... [more]
GDE5_RAT4.354e-1929.33Putative glycerophosphodiester phosphodiesterase 5... [more]
GDE5_HUMAN7.427e-1928.35Putative glycerophosphodiester phosphodiesterase 5... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAB3AH08ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258135 ID=DY258135; Name=DY258135; organism=Citrus clementina; type=EST; length=1313bp
GAAGCTCCAAATTCACGTCGCGTATTTTCTTATATTTCCCTTATCCTTTT
CTTGAGTTCTTGCAAAAGCCAAAAATTAGAATAAAAGAAATGGCTCTCAA
AGCCGTTCATGTCTCTGACGTTCCCAATCTTGATCAAGTTCCCGGAAATG
TTACATTGAATTATCTCCACTCACCCCGCGTCTGCAAAGGGGTTAATGAG
GATGGTGTTGAGACAAAGAGTGGATATAAGTTTCCAAAATTTGTGGTGAT
GGGCCACAGAGGGAGTGGGATGAACATGTTACGGTCGTCCGATCAAAGAA
TGAAATCAATGAAAGAAAATACAATTCTCTCTTTCAATGCAGCCGCTCGT
CACCCTCTCGACTTCATTGAATTCGACGTTCAGGTGACGAGAGATGGCTG
TCCGGTTATTTTCCATGATAATTTCATCTTCACCAAGGACGAGGGTGAAA
TAATTGAGAAAAGGGTTACGGACATTACTTTAGCTGAATTTCTTTCCTAT
GGACCGCAGAACGACCCTGAAAATGTGGGGAAGCCTATGCTTAGAAAAAC
AAAAGATGGGAGAATATTTGAGTGGAAGGTTGAAAAGGACACTCCTCTAT
GTACATTGCAAGAGGCTTTTGAGAAAGTTGATCAATCCGTGGGTTTTAAT
GTTGAATTAAAGTTTGATGATCAATTAGTTTACACGGAGGAAGAACTCAC
GCATGCCCTTGAAGCTATCTTGAAGGTGGTGTTTGAACATGCCCAGGGCA
GACCGATCATGTTCTCTAGCTTTCAACCTGATGCAGCGCTGTTGATTAGG
AAACTCCAGAGCACCTACCCTGTGTTCTTCTTAACAAATGGAGGTGCCCA
AACTTACACGGACGTAAAAAGGAGCTCCTTGGATGAGGCCATTAAGGTGT
GCTTGGCAGGCGAATTGCAAAGGAATTGTCTCTGGAAGTGAGAGCTATCT
TTTAAAATCCTGGAAGCATTAAAAAAAATCAGGAAGCCAAGCTTTGTCTT
GTATCATACGGGGAACTGACCAAGTGGCCAAAGGTGGTGGACTTGCCACG
TTTCCGGGGCATCGAAGGGGTCCTCGTTGATTTTGGTAGCGAAAATTACG
GAGGCATTTCCCGGATTCCATTAAAAAAGAGGGGGGAAAAATAAAAAAAA
AAATATCTTTTTTTGCCGAAGGAAGGGGAAAGCCCCCCACATCAAAAAAA
AAAACCCCCACAATTTTCCCAAAAAGGGAAAAAAACTCCTATTTCCTCAA
TCCCCACACTTTTATTTATCCCAAACAAACCCCAAACACCCAACAATCAT
AAAAAGAAGGGGG
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