DY258200

Overview
NameDY258200
Unique NameDY258200
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15384 contig Ccv1_Contig15384:319..1237. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS2_ARATH (Ribose-phosphate pyrophosphokinase 2 OS=Arabidopsis thaliana GN=PRS2 PE=1 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 7.826e-56
Identity = 107/113 (94.69%), Postives = 111/113 (98.23%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            VDHVYCQPVILDYLASK++SS DLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDD+IDTAGTI KGAALLH+EGAREVYACCTHAVF
Sbjct:  228 VDHVYCQPVILDYLASKSISSEDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDIIDTAGTIVKGAALLHEEGAREVYACCTHAVF 340          

HSP 2 Score: 108.227 bits (269), Expect = 6.687e-23
Identity = 51/58 (87.93%), Postives = 55/58 (94.83%), Query Frame = 1
Query:  550 PPAIERLSGGLFQEVIVTNTIPVAEKNYFPELTVLSIANLLGETIWRVHDDCSVSSIF 723
            PPAIERLS GL QEVIVTNT+PVAEKNYFP+LT+LS+ANLLGETIWRVHDD SVSSIF
Sbjct:  342 PPAIERLSSGLLQEVIVTNTLPVAEKNYFPQLTILSVANLLGETIWRVHDDSSVSSIF 399          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS1_ARATH (Ribose-phosphate pyrophosphokinase 1 OS=Arabidopsis thaliana GN=PRS1 PE=2 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.476e-54
Identity = 105/113 (92.92%), Postives = 109/113 (96.46%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            VDHVYCQPVILDYLASK++ S DLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRR GHNVAEVMNLIGDV+GKVA+MVDDMIDTAGTI KGAALLHQEGAREVYACCTHAVF
Sbjct:  231 VDHVYCQPVILDYLASKSIPSEDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRSGHNVAEVMNLIGDVRGKVAIMVDDMIDTAGTIVKGAALLHQEGAREVYACCTHAVF 343          

HSP 2 Score: 110.538 bits (275), Expect = 1.347e-23
Identity = 52/58 (89.66%), Postives = 56/58 (96.55%), Query Frame = 1
Query:  550 PPAIERLSGGLFQEVIVTNTIPVAEKNYFPELTVLSIANLLGETIWRVHDDCSVSSIF 723
            PPAIERLSGGL QEVIVTNT+PVAEKNYFP+LT+LS+ANLLGETIWRVHDD SVSSIF
Sbjct:  345 PPAIERLSGGLLQEVIVTNTLPVAEKNYFPQLTILSVANLLGETIWRVHDDSSVSSIF 402          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS1_ORYSJ (Ribose-phosphate pyrophosphokinase 1 OS=Oryza sativa subsp. japonica GN=Os02g0127700 PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.928e-54
Identity = 106/113 (93.81%), Postives = 110/113 (97.35%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            VDHVY QPVILDYLASKT+ S+DLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDV+GKVAVM+DDMIDTAGTIAKGA LLHQEGAREVYACCTHAVF
Sbjct:  218 VDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVRGKVAVMMDDMIDTAGTIAKGAELLHQEGAREVYACCTHAVF 330          

HSP 2 Score: 96.6709 bits (239), Expect = 2.013e-19
Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = 1
Query:  550 PPAIERLSGGLFQEVIVTNTIPVAEKNYFPELTVLSIANLLGETIWRVHDDCSV 711
            PPAIERLS GLFQEVI+TNTIP+ E   FP+LT+LS+ANLLGETIWRVHDDCSV
Sbjct:  332 PPAIERLSSGLFQEVIITNTIPLKEDKSFPQLTILSVANLLGETIWRVHDDCSV 385          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS1_SPIOL (Ribose-phosphate pyrophosphokinase 1 OS=Spinacia oleracea GN=PRS1 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.288e-54
Identity = 107/113 (94.69%), Postives = 110/113 (97.35%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            VDHVY QPVILDYLASKT+ S+DLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTI+KGAALLHQEGAREVYAC THAVF
Sbjct:  164 VDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTISKGAALLHQEGAREVYACSTHAVF 276          

HSP 2 Score: 115.161 bits (287), Expect = 5.470e-25
Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 1
Query:  550 PPAIERLSGGLFQEVIVTNTIPVAEKNYFPELTVLSIANLLGETIWRVHDDCSVSSIFQ 726
            PPAIERLS GLFQEVI+TNTIPV EKNYFP+LTVLS+ANLLGETIWRVHDDCSVSSIFQ
Sbjct:  278 PPAIERLSSGLFQEVIITNTIPVLEKNYFPQLTVLSVANLLGETIWRVHDDCSVSSIFQ 336          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS2_SPIOL (Ribose-phosphate pyrophosphokinase 2, chloroplastic OS=Spinacia oleracea GN=PRS2 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.294e-54
Identity = 104/113 (92.04%), Postives = 109/113 (96.46%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            VDHVYCQPVILDYLASK ++S+DLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRH HNVAEVMNLIGDVKGKVAVM+DDMIDTAGTI KGA LLH+EGAREVYACCTHAVF
Sbjct:  223 VDHVYCQPVILDYLASKGIASSDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHAHNVAEVMNLIGDVKGKVAVMLDDMIDTAGTITKGAELLHEEGAREVYACCTHAVF 335          

HSP 2 Score: 103.99 bits (258), Expect = 1.261e-21
Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 1
Query:  550 PPAIERLSGGLFQEVIVTNTIPVAEKNYFPELTVLSIANLLGETIWRVHDDCSVSSIFQ 726
            PPAIERLS G FQEVI+TNT+PVAEKN+F +LTVLS ANLLGETIWRVHDD SVSSIFQ
Sbjct:  337 PPAIERLSSGCFQEVIITNTLPVAEKNFFRQLTVLSTANLLGETIWRVHDDSSVSSIFQ 395          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS5_ARATH (Ribose-phosphate pyrophosphokinase 5 OS=Arabidopsis thaliana GN=PRS5 PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 5.608e-54
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            VDHVY QPVILDYLASK +SS DLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVA+MVDDMIDTAGTI+KGAALLHQEGAREVYAC THAVF
Sbjct:  216 VDHVYGQPVILDYLASKAISSEDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAIMVDDMIDTAGTISKGAALLHQEGAREVYACTTHAVF 328          

HSP 2 Score: 102.449 bits (254), Expect = 3.669e-21
Identity = 46/53 (86.79%), Postives = 51/53 (96.23%), Query Frame = 1
Query:  550 PPAIERLSGGLFQEVIVTNTIPVAEKNYFPELTVLSIANLLGETIWRVHDDCS 708
            PPAI RLS GLFQEVI+TNTIP++EKNYFP+LTVLS+ANLLGETIWRVHDDCS
Sbjct:  330 PPAISRLSSGLFQEVIITNTIPLSEKNYFPQLTVLSVANLLGETIWRVHDDCS 382          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS2_ORYSJ (Ribose-phosphate pyrophosphokinase 2 OS=Oryza sativa subsp. japonica GN=Os06g0617800 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 1.252e-45
Identity = 94/113 (83.19%), Postives = 101/113 (89.38%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            VDH++ QPVILDYLASKT+S  DLVVVSPDVGGV RARAFAKKLSDAPLAIVDKRR GHN++EVM+LIGDVKGKVA+MVDDMIDTAGTI   AALL QEGA  VYAC THAVF
Sbjct:  228 VDHIHGQPVILDYLASKTISK-DLVVVSPDVGGVVRARAFAKKLSDAPLAIVDKRRQGHNMSEVMHLIGDVKGKVAIMVDDMIDTAGTITSAAALLKQEGAEAVYACSTHAVF 339          

HSP 2 Score: 87.4261 bits (215), Expect = 1.221e-16
Identity = 43/59 (72.88%), Postives = 50/59 (84.75%), Query Frame = 1
Query:  550 PPAIERLSGGLFQEVIVTNTIPVAEKNYFPELTVLSIANLLGETIWRVHDDCSVSSIFQ 726
            PPAIERLSGG+F+EVIVTN+I + E   FP+LTVLS+ANL+ ETIW VH D SVSSIFQ
Sbjct:  341 PPAIERLSGGIFEEVIVTNSILLPEHKCFPQLTVLSMANLVAETIWHVHRDGSVSSIFQ 399          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS_ANASP (Ribose-phosphate pyrophosphokinase OS=Anabaena sp. (strain PCC 7120) GN=prs PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.817e-43
Identity = 87/112 (77.68%), Postives = 98/112 (87.50%), Query Frame = 1
Query:    4 DHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            DHVY  PV+LDYL SK +  +D+VVVSPDVGGVARARAFAKKL+DAPLAI+DKRR  HNVAEV+N+IGDVKGK AV+VDDMIDT GTIA GA LL +EGAR+VYAC THAVF
Sbjct:  161 DHVYGSPVLLDYLTSKQL--HDIVVVSPDVGGVARARAFAKKLNDAPLAIIDKRRQAHNVAEVLNVIGDVKGKTAVLVDDMIDTGGTIAAGAKLLREEGARQVYACATHAVF 270          

HSP 2 Score: 95.5153 bits (236), Expect = 4.485e-19
Identity = 42/59 (71.19%), Postives = 53/59 (89.83%), Query Frame = 1
Query:  550 PPAIERLSGGLFQEVIVTNTIPVAEKNYFPELTVLSIANLLGETIWRVHDDCSVSSIFQ 726
            PPA+ERLS GLF+EVIVTNTIP+ E + FP+L VLS+ANLLGETIWR+H+D S+SS+F+
Sbjct:  272 PPAVERLSSGLFEEVIVTNTIPIPESDRFPQLVVLSVANLLGETIWRIHEDTSISSMFR 330          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS_SYNY3 (Ribose-phosphate pyrophosphokinase OS=Synechocystis sp. (strain PCC 6803) GN=prs PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.871e-41
Identity = 84/112 (75.00%), Postives = 98/112 (87.50%), Query Frame = 1
Query:    4 DHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            DH+Y  PVI+DYL SK ++  DLVVVSPDVGGVARARAFAKKL+DAPLAI+DKRR  HNVAEV+NLIGDV GK AV+VDDMIDTAGT+++G+ LL  +GAR+VYAC THAVF
Sbjct:  164 DHMYGSPVIIDYLKSKQLT--DLVVVSPDVGGVARARAFAKKLNDAPLAIIDKRRQSHNVAEVLNLIGDVDGKTAVLVDDMIDTAGTLSEGSRLLRAQGARQVYACATHAVF 273          

HSP 2 Score: 91.6633 bits (226), Expect = 6.477e-18
Identity = 40/58 (68.97%), Postives = 53/58 (91.38%), Query Frame = 1
Query:  553 PAIERLSGGLFQEVIVTNTIPVAEKNYFPELTVLSIANLLGETIWRVHDDCSVSSIFQ 726
            PAI RLSGGLF+EVIVTNTIPV + ++FP+LT+LS+ANL+GE IWR+H++ SVSS+F+
Sbjct:  276 PAINRLSGGLFEEVIVTNTIPVPDDHHFPQLTILSVANLIGEAIWRIHEESSVSSMFR 333          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS_SYNE7 (Ribose-phosphate pyrophosphokinase OS=Synechococcus elongatus (strain PCC 7942) GN=prs PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.871e-41
Identity = 84/112 (75.00%), Postives = 97/112 (86.61%), Query Frame = 1
Query:    4 DHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            DHVY  PV++DYL SK ++  DLVVVSPDVGGVARARAFAKKL DAPLAI+DKRR  HNVAEV+N+IGDV+GK AV+VDDMIDTAGTI +GA LL ++GA +VYAC THAVF
Sbjct:  161 DHVYGSPVLIDYLRSKNLA--DLVVVSPDVGGVARARAFAKKLDDAPLAIIDKRRQAHNVAEVLNVIGDVQGKTAVLVDDMIDTAGTICEGARLLRKQGASQVYACATHAVF 270          

HSP 2 Score: 93.9745 bits (232), Expect = 1.305e-18
Identity = 44/60 (73.33%), Postives = 55/60 (91.67%), Query Frame = 1
Query:  550 PPAIERLSG-GLFQEVIVTNTIPVAEKNYFPELTVLSIANLLGETIWRVHDDCSVSSIFQ 726
            PPAIERLS  GLF+EVIVTNTIP+ E+N FP+LT+LS+ANLLGETIWR+H++ SVSS+F+
Sbjct:  272 PPAIERLSASGLFEEVIVTNTIPIPEENRFPQLTILSVANLLGETIWRIHEESSVSSMFR 331          
The following BLAST results are available for this feature:
BLAST of DY258200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
KPRS2_ARATH7.826e-5694.69Ribose-phosphate pyrophosphokinase 2 OS=Arabidopsi... [more]
KPRS1_ARATH1.476e-5492.92Ribose-phosphate pyrophosphokinase 1 OS=Arabidopsi... [more]
KPRS1_ORYSJ1.928e-5493.81Ribose-phosphate pyrophosphokinase 1 OS=Oryza sati... [more]
KPRS1_SPIOL3.288e-5494.69Ribose-phosphate pyrophosphokinase 1 OS=Spinacia o... [more]
KPRS2_SPIOL4.294e-5492.04Ribose-phosphate pyrophosphokinase 2, chloroplasti... [more]
KPRS5_ARATH5.608e-5493.81Ribose-phosphate pyrophosphokinase 5 OS=Arabidopsi... [more]
KPRS2_ORYSJ1.252e-4583.19Ribose-phosphate pyrophosphokinase 2 OS=Oryza sati... [more]
KPRS_ANASP5.817e-4377.68Ribose-phosphate pyrophosphokinase OS=Anabaena sp.... [more]
KPRS_SYNY31.871e-4175.00Ribose-phosphate pyrophosphokinase OS=Synechocysti... [more]
KPRS_SYNE71.871e-4175.00Ribose-phosphate pyrophosphokinase OS=Synechococcu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3CC05ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258200 ID=DY258200; Name=DY258200; organism=Citrus clementina; type=EST; length=919bp
GTGGACCATGTATACTGTCAGCCTGTGATTCTTGATTACCTTGCTAGCAA
GACGGTTTCTTCTAATGATTTGGTGGTGGTTTCACCTGATGTCGGTGGAG
TGGCAAGAGCACGTGCTTTTGCCAAAAAGTTATCTGATGCTCCTTTAGCC
ATAGTAGATAAAAGGCGTCATGGACACAATGTTGCAGAGGTGATGAACCT
TATTGGCGATGTAAAAGGAAAAGTTGCAGTAATGGTGGATGACATGATTG
ACACTGCTGGGACTATTGCAAAAGGTGCAGCTCTTTTACATCAAGAAGGG
GCCAGGGAAGTTTATGCATGCTGCACGCATGCAGTTTTCAGGTTGGATTA
CAAATCATAAATTTATCAACTTGATCTCTTTTGACCCATTAACATTCCGA
CAAATAGATTAGATCGCAATTCTGATTCTTTTGCCATCACCTTCTGATAC
TTCCTTGGTCGAGCATCTATTCAACACCTGATGATGAGGAGAGGGTGACA
GCCCCTAACTAGAGGAAGAACCTCGGGGTATCAAGCCAGATGAAAGCTCC
CTCCTGCAATAGAGAGGTTGTCAGGTGGCCTGTTTCAAGAGGTGATCGTT
ACAAATACAATCCCAGTGGCAGAGAAGAACTACTTCCCTGAGTTGACTGT
TCTTTCTATAGCCAACCTGTTGGGTGAGACTATATGGCGTGTTCACGATG
ATTGTTCCGTAAGTAGCATTTTTCAATGAAGTCAGGGAGATATCGAGTGA
TGGTAGCTGCTTCAACTGGTAAAAGGCGTAGAATCGAGTAGGTCTCATAT
CTTTAGGTAGTCTAGCATAAGGGGAAAATTAATCTTATATGCTTTCTCAT
TTGTTAATTTTAATTTTCACTACATTTTTATTGGGCATTAAAGTTTCATC
ATGAATGATGATTCCCATT
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