DY258280

Overview
NameDY258280
Unique NameDY258280
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length341
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig317 contig Ccv1_Contig317:488..827. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DY258280 vs. ExPASy Swiss-Prot
Match: ATP5H_ARATH (ATP synthase subunit d, mitochondrial OS=Arabidopsis thaliana GN=At3g52300 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 2.019e-16
Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = 2 
Query:    2 EKEIAEVQELKEKISTMTAEEYFEKHPELKKKFDDEIRNDYWGY 133
            EKEIA+VQE+ +K+STMTA+EYFEKHPELKKKFDDEIRND WGY
Sbjct:  125 EKEIADVQEISKKLSTMTADEYFEKHPELKKKFDDEIRNDNWGY 168
The following BLAST results are available for this feature:
BLAST of DY258280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ATP5H_ARATH2.019e-1684.09ATP synthase subunit d, mitochondrial OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAB3DH11ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258280 ID=DY258280; Name=DY258280; organism=Citrus clementina; type=EST; length=341bp
GGAGAAAGAAATAGCTGAGGTTCAAGAACTGAAGGAAAAGATCAGCACCA
TGACCGCTGAGGAATACTTTGAAAAGCATCCGGAGCTCAAAAAGAAGTTC
GATGATGAAATCAGGAATGACTACTGGGGCTATTGATCACACATTTGCTC
AATTTAGCAGCTGCATTTCCTAGCTCGGCCAAGATTTTCTGAAGTTGCCC
TGTTTTCCCAGCTTGTTAAATAATAATGATCATTCGAATTGTTTTTGCAT
AAACCTGTTGCTCATGGTTTCAAAAATTTGAGCTTTGATCACATCTATGC
TAAACATTCAGTTTTCGTGGCAATGCATACATTTTAACTTT
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