DY258313

Overview
NameDY258313
Unique NameDY258313
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length939
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA_PINTA (Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.431e-54
Identity = 113/135 (83.70%), Postives = 121/135 (89.63%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMAQDDE-EVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AMLKLGMKP+ GVSRVT+KKSKNILFVIS PDVFKSPTSDTYI FGEAKIEDLSSQLQTQAAEQFK   PN  +V  KPESS  AQ+DE EVD+TGVEPKDIELVMTQAGV R++AVKALKAADGDIVSAIM+LT
Sbjct:   72 AMLKLGMKPVSGVSRVTIKKSKNILFVISNPDVFKSPTSDTYIAFGEAKIEDLSSQLQTQAAEQFKA--PNLSHVTMKPESSTAAQEDEDEVDDTGVEPKDIELVMTQAGVSRTKAVKALKAADGDIVSAIMDLT 204          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA1_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana GN=At3g12390 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.199e-53
Identity = 114/136 (83.82%), Postives = 120/136 (88.24%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESS--AMAQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AMLKLGMKPI GVSRVTVKKSKNILFVISKPDVFKSP SDTY++FGEAKIEDLSSQ+Q+QAAEQFK   P+  NV SK ESS  A+ QDDEEVDE GVEPKDIELVMTQAGV R  AVKALKAADGDIVSAIMELT
Sbjct:   69 AMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQIQSQAAEQFKA--PDLSNVISKGESSSAAVVQDDEEVDEEGVEPKDIELVMTQAGVSRPNAVKALKAADGDIVSAIMELT 202          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA3_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Arabidopsis thaliana GN=At5g13850 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.511e-51
Identity = 111/141 (78.72%), Postives = 119/141 (84.40%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMA-------QDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AMLKLGMKPI GVSRVTVKKSKNILFVISKPDVFKSP SDTY++FGEAKIEDLSSQLQ+QAAEQFK   PN  NV S+ E+S+ A        DDEEVDE GVEPKDIELVMTQAGV + RAVKALK A+GDIVSAIMELT
Sbjct:   65 AMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQLQSQAAEQFKA--PNLSNVISQGETSSAATAAAVQDDDDEEVDEEGVEPKDIELVMTQAGVSKPRAVKALKLANGDIVSAIMELT 203          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA2_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana GN=At3g49470 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.993e-46
Identity = 96/140 (68.57%), Postives = 118/140 (84.29%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSA------MAQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AMLKLGMKP+ GVSRVT+K++KN+LF ISKPDVFKSP S+TY++FGEAKIEDLSSQLQTQAA+QF++  P  G  + + E+S       + +D+EE+DETGVE +DI+LVMTQAGV RS+AVKALK+ DGDIVSAIMELT
Sbjct:   79 AMLKLGMKPVTGVSRVTIKRTKNVLFFISKPDVFKSPHSETYVIFGEAKIEDLSSQLQTQAAQQFRM--PEIGATSQRAEASTATVEAQVEEDEEEIDETGVEARDIDLVMTQAGVSRSKAVKALKSHDGDIVSAIMELT 216          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA4_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana GN=At4g10480 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.910e-45
Identity = 97/142 (68.31%), Postives = 117/142 (82.39%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPP-----PNTGNVASKPESSAMAQ---DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AMLKLGMKP+  VSRVT+K+SKN+LFVISKPDVFKSP S+TY++FGEAKI+D+SSQLQ QAA++FK+P      PNT       E++ +AQ   DDE+VDETGVE KDI+LVMTQAGV R +AVKALK ++GDIVSAIMELT
Sbjct:   74 AMLKLGMKPVTDVSRVTIKRSKNVLFVISKPDVFKSPNSETYVIFGEAKIDDMSSQLQAQAAQRFKMPDVASMIPNTDG----SEAATVAQEEEDDEDVDETGVEAKDIDLVMTQAGVSRPKAVKALKESNGDIVSAIMELT 211          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA5_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 5 OS=Arabidopsis thaliana GN=At1g33040 PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 2.063e-43
Identity = 89/139 (64.03%), Postives = 117/139 (84.17%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPP-----PNTGNVASKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            A+LKLGMKP+  VSRVT+K++KN+LFVISKPDV+KSP ++TY++FGEAK++DLSSQLQTQAA++FK+P      PN G+ A+     A  +D+++VD+TGVE +DI+LVMTQAGV +++AV ALKA DGDIVSAIMELT
Sbjct:   71 AVLKLGMKPVSDVSRVTIKRAKNVLFVISKPDVYKSPNAETYVIFGEAKVDDLSSQLQTQAAQRFKMPDVTSMLPNAGSEATM-APLAEEEDEDDVDDTGVEARDIDLVMTQAGVSKAKAVSALKANDGDIVSAIMELT 208          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA_ORENI (Nascent polypeptide-associated complex subunit alpha OS=Oreochromis niloticus GN=naca PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.251e-40
Identity = 87/136 (63.97%), Postives = 108/136 (79.41%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKVP     NV    ++  + +  ++EEVDETGVE KDIELVM+QA V R++AV+ALK  + DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVPGETVSNVQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNNNDIVNAIMELT 214          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA_DANRE (Nascent polypeptide-associated complex subunit alpha OS=Danio rerio GN=naca PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.360e-39
Identity = 85/136 (62.50%), Postives = 107/136 (78.68%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDETGVE KDIELVM+QA V R++AV+ALK  + DIV+AIMELT
Sbjct:   79 AMSKLGLRQVAGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNNNDIVNAIMELT 214          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACAD_MOUSE (NAC-alpha domain-containing protein 1 OS=Mus musculus GN=Nacad PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.360e-39
Identity = 85/141 (60.28%), Postives = 106/141 (75.18%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVP-------PPNTGNVASKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AM KLG++ I GV+R+T++KSKNILFVI+KPDVFKSP SDTY+VFGEAKIEDLS Q+   AAE+FKVP       P  +     +PE     ++DEEV+E G+EP+DIELVM QA V R++AV+ALK    DIV+AIMELT
Sbjct: 1363 AMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPELSPGPRVRPECEEQEEEDEEVEEAGLEPRDIELVMAQANVTRAKAVRALKDNHSDIVNAIMELT 1503          
BLAST of DY258313 vs. ExPASy Swiss-Prot
Match: NACA_XENTR (Nascent polypeptide-associated complex subunit alpha OS=Xenopus tropicalis GN=naca PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.083e-39
Identity = 85/136 (62.50%), Postives = 106/136 (77.94%), Query Frame = 3
Query:  249 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 650
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP SDTYIVFGEAKIEDLS Q Q  AAE+FKV      N+    ++  + +  ++EEVDETGVE KDIELVM+QA V R++AV+ALK    DIV+AIMELT
Sbjct:   78 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 213          
The following BLAST results are available for this feature:
BLAST of DY258313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_PINTA4.431e-5483.70Nascent polypeptide-associated complex subunit alp... [more]
NACA1_ARATH2.199e-5383.82Nascent polypeptide-associated complex subunit alp... [more]
NACA3_ARATH3.511e-5178.72Nascent polypeptide-associated complex subunit alp... [more]
NACA2_ARATH1.993e-4668.57Nascent polypeptide-associated complex subunit alp... [more]
NACA4_ARATH4.910e-4568.31Nascent polypeptide-associated complex subunit alp... [more]
NACA5_ARATH2.063e-4364.03Nascent polypeptide-associated complex subunit alp... [more]
NACA_ORENI1.251e-4063.97Nascent polypeptide-associated complex subunit alp... [more]
NACA_DANRE2.360e-3962.50Nascent polypeptide-associated complex subunit alp... [more]
NACAD_MOUSE2.360e-3960.28NAC-alpha domain-containing protein 1 OS=Mus muscu... [more]
NACA_XENTR3.083e-3962.50Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AF01FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258313 ID=DY258313; Name=DY258313; organism=Citrus clementina; type=EST; length=939bp
CCGCTTCTCGTTTTCAAGTCTCAACACCCAGCCCAAAAAAAATGACTGCT
CAGTCTCAAGAAGAGCTCCTCGCTGCCCATCTTGAAGAGCAAAAGCTCAA
CCCCGATGAGCCTGTAGTCGAGGACGACGATGATGAGGATGATGATGAGG
AGGATGAGGATGATGACAAGGATGAAGACGATGTGGAAGGGAAAGGAGAT
GGAAGTGGTCGCTCAAAACAGAGCAGGAGTGAAAAGAAGAGTCGGAAAGC
AATGTTGAAACTTGGAATGAAGCCAATCCCTGGTGTCAGTCGAGTTACAG
TTAAAAAGAGCAAAAATATTTTGTTTGTTATCTCCAAACCAGATGTTTTC
AAGAGTCCTACATCTGACACATACATTGTCTTTGGGGAAGCAAAGATCGA
GGATCTGAGTTCACAACTGCAAACTCAGGCTGCAGAGCAGTTCAAGGTCC
CTCCTCCTAACACAGGTAATGTGGCATCAAAGCCTGAGTCATCGGCCATG
GCTCAAGATGACGAAGAAGTAGATGAGACTGGTGTGGAGCCAAAGGACAT
TGAGTTGGTAATGACTCAAGCTGGGGTACCGAGGTCAAGGGCTGTGAAAG
CACTCAAAGCCGCAGATGGTGACATCGTTTCTGCCATTATGGAGCTAACA
AATTGATGGTCACTTTCTTAATTATGTTGCTCTGCTGAATGATCCCATAA
GGAAATCTTTTTTTTTTTTTTTTCTCGCTGTTACCATTTACAATTGAAGT
TGCAGATTTTTGCAGGCTTTATAACTTTTCTCTCTTTTTTTCCCCTCTTT
TTCCCTTGTGTATCAGCATGAAACAGCTTTTACTTAATGTTAGAACTAAA
ATGTTGTTATGCAAAATTCCAATCCGGGGGGGAAAATCAAGCCCAATGAG
GTTTTGAAATACTTTTTACCTCCTTACAAAACCTTTGGG
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