DY258360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258360 vs. ExPASy Swiss-Prot
Match: TRA1_MAIZE (Putative AC transposase OS=Zea mays PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 1.034e-33 Identity = 96/284 (33.80%), Postives = 143/284 (50.35%), Query Frame = 1 Query: 4 LSSLQPLWKPVSRNEIKKEIMDIYEYERAKKVSALDCNQSRIAITAKMWTVENQSVGYMAVTAHFIDDSWTLQSHLLRFIPVSTPHTAEVVCDTLLHCLMDHNIDRKLSALIVDNCSYNEQMIQYLLLKLGKDD--LIMHGQLFHIHCFVDTLNLIVKDGLSVISDAIAKIRDSVSFWSESSKRMEKFEEIAHLLGITSDRKLVLDCAESWNSTYLMISTALQYK-SVFSLLEQHEGQYGCL-PSEKDWELA-HILKEN*KVIRCYSLFSNVKYPTSICFFHLF 840 + SL+P + SR +K IMD+Y E+ K L QSR + T MWT Q+ YM VT H+IDD W LQ ++ F V HT + + T ++ NI++KL AL +DN S NE + ++ L D L+ G FH+ C LNL+ KDGL+VI+ I KI+ V S + E+ + A + + + D + WNSTYLM+ AL YK ++ L +Y + P ++W++A + K K L S +Y T+ F+ F Sbjct: 255 VKSLRPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWT-SCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLKTSDPRRYDAICPKAEEWKMALTLFKCLKKFFDLTELLSGTQYSTANLFYKGF 537
BLAST of DY258360 vs. ExPASy Swiss-Prot
Match: TRAC9_MAIZE (Putative AC9 transposase OS=Zea mays PE=4 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 4.343e-32 Identity = 87/242 (35.95%), Postives = 125/242 (51.65%), Query Frame = 1 Query: 4 LSSLQPLWKPVSRNEIKKEIMDIYEYERAKKVSALDCNQSRIAITAKMWTVENQSVGYMAVTAHFIDDSWTLQSHLLRFIPVSTPHTAEVVCDTLLHCLMDHNIDRKLSALIVDNCSYNEQMIQYLLLKLGKDD--LIMHGQLFHIHCFVDTLNLIVKDGLSVISDAIAKIRDSVSFWSESSKRMEKFEEIAHLLGITSDRKLVLDCAESWNSTYLMISTALQYK-SVFSLLEQHEGQYGCL 720 + SL+P + SR +K IMD+Y E+ K L QSR + T MWT Q+ YM VT H+IDD W LQ ++ F V HT + + T ++ NI++KL AL +DN S NE + ++ L D L+ G FH+ C LNL+ KDGL+VI+ I KI+ V S + E+ + A + + + D + WNSTYLM+ AL YK ++ L +Y CL Sbjct: 200 VKSLRPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWT-SCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLKTSDPRRYVCL 440 The following BLAST results are available for this feature:
BLAST of DY258360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258360 ID=DY258360; Name=DY258360; organism=Citrus clementina; type=EST; length=1282bpback to top |