DY258377

Overview
NameDY258377
Unique NameDY258377
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1290
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258377 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 3.296e-96
Identity = 208/332 (62.65%), Postives = 234/332 (70.48%), Query Frame = 1
Query:   97 MISSVKHTPFSASTDFLPKKRFLTPT-LKFSPLPIIQN----SIFNNKFSSEKPLHISSTQNLTFSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELHFT*LDLGEL*YRIWHSCFRTFSSKKGMKGKFRWWGKTNKACLAKNVPF*FSHPFAFAGGRAPKIGGCGPGQKALASIWPQLFGW 1077
            M+SS+K +  S ST      R   PT LKFSPL II+N    S   N  S +KPLHISS  N        ++E+K +  AYEADRSRPLDINIE+ DEQ+    AQ+LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIA+APKTDLEFWK+LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF  GET P+PVY+SLLPIIGGCALAA+TEL+F                FR   SKKGMKGK    G    ACL+  +      PF+ A    P++   G  Q A++ + P    W
Sbjct:    1 MLSSIKPSSSSFSTAISGSVRRSIPTKLKFSPLLIIKNCHNQSFNANVVSHQKPLHISSASNF-------KREVKVE--AYEADRSRPLDINIELPDEQS----AQKLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAAITELNFNITGFMGAMISNLAFVFRNIFSKKGMKGK-SVSGMNYYACLSM-MSLVILTPFSIA-VEVPQMWAAG-WQNAVSQVGPNFVWW 315          
BLAST of DY258377 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 6.673e-81
Identity = 169/280 (60.36%), Postives = 195/280 (69.64%), Query Frame = 1
Query:  238 KPLHISSTQNLTFSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELHFT*LDLGEL*YRIWHSCFRTFSSKKGMKGKFRWWGKTNKACLAKNVPF*FSHPFAFAGGRAPKIGGCGPGQKALASIWPQLFGW 1077
            KPLH+SS+         + K    +C AYEADRS P  I  +    + + EAA++LKIGIYFATWWALNVVFNIYNKKVLNA+PYPWLTSTLSLA GSLMML+SWA  I E PKTD +FWK+LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF+ GET P  VY+SL+PIIGGCAL+A+TEL+F  +             FR   SKKGMKGK    G    ACL+  +      PFA A    P++   G  Q ALA++ PQ   W
Sbjct:   48 KPLHLSSSL--------RAKSPVVRCEAYEADRSEPHPIGDDAAAAETKSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGK-SVSGMNYYACLSM-LSLLILTPFAIA-VEGPQMWVDG-WQTALATVGPQFVWW 315          
BLAST of DY258377 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 8.837e-33
Identity = 71/174 (40.80%), Postives = 103/174 (59.20%), Query Frame = 1
Query:  385 FEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELHFT*LDLGEL*YRIWHSCFRTFSSKKGM 906
            F     L  G +F TW+ LNV+FNI NKK+ N FPYP+  S + LA G +  LVSW   + +    D    K L PVAV H +GHV + VS + VAVSFTH +K+ EP F+   S+F+ G+++P+ +++SL P++ G ++A++TEL F  L             +R+  SKK M
Sbjct:   92 FSRYPALTTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAM 265          
BLAST of DY258377 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.843e-31
Identity = 71/168 (42.26%), Postives = 100/168 (59.52%), Query Frame = 1
Query:  403 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELHFT*LDLGEL*YRIWHSCFRTFSSKKGM 906
            L  GI    W+ LNV+FNI NKK+ N FPYP+  S + L  G +  LVSW+  + +    + +  K L PVAV H IGHV + VS + VAVSFTH IK+ EP F+   S+FL G+ +P+ +++SL P++ G A+A++TEL F  L             +R+  SKK M
Sbjct:  103 LVTGILLLMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWLSLAPVVLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAM 270          
BLAST of DY258377 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.713e-31
Identity = 69/168 (41.07%), Postives = 101/168 (60.12%), Query Frame = 1
Query:  403 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELHFT*LDLGEL*YRIWHSCFRTFSSKKGM 906
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + L  G +  L SW+  + +    D +  K L PVAV H IGHV + VS + VAVSFTH IK+ EP F+   S+F+ G+++P+ +++SL P++ G ++A++TEL F  L             +R+  SKK M
Sbjct:  100 LVTGSFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWSVGLPKRAPMDSKLLKLLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNVSFTYRSLYSKKAM 267          
BLAST of DY258377 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.713e-31
Identity = 69/168 (41.07%), Postives = 99/168 (58.93%), Query Frame = 1
Query:  403 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELHFT*LDLGEL*YRIWHSCFRTFSSKKGM 906
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + LA G +  L  WA  + +    D    K L PVA  H +GHV + VS + VAVSFTH IKS EP F+   S+F+ G+++P+ +++SL P++ G ++A++TEL F  L             +R+  SKK M
Sbjct:  104 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGLPKRAPMDSNLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKSLEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAM 271          
BLAST of DY258377 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.737e-31
Identity = 60/142 (42.25%), Postives = 91/142 (64.08%), Query Frame = 1
Query:  403 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELHF 828
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + L  G +  L+SW+  + +    +    K LFPVA+ H IGH+ + VS + VAVSF H IK+ EP FS   ++F+ G+ +P  +++SL P++ G ++A++TEL F
Sbjct:  106 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSLIHLVVGVVYCLISWSVGLPKRAPINGTLLKLLFPVALCHGIGHITSNVSFAAVAVSFAHTIKALEPFFSAAATQFILGQQVPFSLWLSLAPVVIGVSMASLTELSF 247          

HSP 2 Score: 24.6386 bits (52), Expect = 8.737e-31
Identity = 9/21 (42.86%), Postives = 16/21 (76.19%), Query Frame = 3
Query:  837 GFRGAMISNLAFVFPNLFLQK 899
            GF  AMISN++F + +++ +K
Sbjct:  251 GFINAMISNISFTYRSIYSKK 271          
BLAST of DY258377 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.080e-30
Identity = 69/179 (38.55%), Postives = 101/179 (56.42%), Query Frame = 1
Query:  370 DEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELHFT*LDLGEL*YRIWHSCFRTFSSKKGM 906
            D +  F     L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + LA G +  LVSW   + +    D    K L PVA  H +GHV + VS + V VSFTH +K+ EP F+   S+F+ G+ +P+ +++SL P++ G ++A++TEL F  L             +R+  SKK M
Sbjct:   99 DAKVGFFNKATLTTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWGVGLPKRAPIDSTQLKLLTPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLALWLSLAPVVLGVSMASLTELSFNWLGFTSAMISNISFTYRSIYSKKAM 277          
BLAST of DY258377 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.407e-30
Identity = 67/168 (39.88%), Postives = 98/168 (58.33%), Query Frame = 1
Query:  403 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELHFT*LDLGEL*YRIWHSCFRTFSSKKGM 906
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + LA G +  L SW   + +    D    K L PV   H +GHV + VS + VAVSFTH IK+ EP F+   S+F+ G+++P+ +++SL P++ G ++A++TEL F  L             +R+  SKK M
Sbjct:  103 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLGSWTVGLPKRAPVDSNILKLLIPVGFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAM 270          
BLAST of DY258377 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.490e-27
Identity = 60/142 (42.25%), Postives = 90/142 (63.38%), Query Frame = 1
Query:  403 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELHF 828
            L++G+ FA W+  N+ FNIYNK+VL A   P   + +  A GS+++   WA  + + PK       ++ P+AV HT+G++   +S+ KV+VSFTH IK+ EP FSV++S    GE     V  S++PI+GG ALA+VTE+ F
Sbjct:  100 LELGLLFAMWYLFNIYFNIYNKQVLKALHAPMTVTLVQFAVGSVLITFMWALNLYKRPKISAAQLAAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGEVPTPWVIGSIIPIVGGVALASVTEVSF 241          
The following BLAST results are available for this feature:
BLAST of DY258377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
GPT2_ARATH3.296e-9662.65Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH6.673e-8160.36Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
TPT_PEA8.837e-3340.80Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB2.843e-3142.26Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL3.713e-3141.07Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR3.713e-3141.07Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE8.737e-3142.25Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU1.080e-3038.55Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR2.407e-3039.88Triose phosphate/phosphate translocator, chloropla... [more]
TPT2_BRAOB2.490e-2742.25Triose phosphate/phosphate translocator, non-green... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BG06FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258377 ID=DY258377; Name=DY258377; organism=Citrus clementina; type=EST; length=1290bp
CACGTATACAATTTCTCTTCTCTCCGGCTTCGGGTACAAAACTTGTCGAA
TTCGTTGAATTACCCCCCTACCATTCGCATTCTTCACAAAAACACAATGA
TCTCTTCAGTTAAGCACACCCCATTTTCAGCATCCACAGATTTCTTGCCA
AAGAAACGTTTTTTAACCCCAACGCTAAAGTTCTCTCCGCTACCCATCAT
CCAAAATTCAATCTTTAACAACAAATTCTCTTCAGAAAAGCCTCTTCATA
TTTCATCAACTCAAAATCTCACATTTTCTCCAAAAGAGCAACAAAAAGAG
CTTAAAACACAGTGCAATGCCTATGAGGCTGACAGGTCACGTCCTCTGGA
CATAAACATCGAGGTTCTTGATGAGCAGGCTCGGTTTGAGGCTGCCCAGA
GGCTCAAAATTGGCATATATTTTGCCACATGGTGGGCTTTGAATGTGGTG
TTTAATATCTATAACAAAAAAGTGTTGAATGCTTTTCCTTATCCTTGGCT
TACTTCTACTCTTTCACTGGCTTGTGGCTCTCTCATGATGTTGGTTTCTT
GGGCCACCAGAATCGCTGAAGCCCCTAAAACCGATCTTGAGTTCTGGAAG
AGTTTGTTTCCTGTTGCAGTGGCACATACAATTGGGCATGTAGCAGCAAC
CGTAAGTATGTCAAAAGTTGCAGTTTCATTCACTCACATCATCAAGAGTG
GTGAGCCTGCATTCAGTGTATTGGTTTCAAGGTTCTTGTTCGGTGAGACA
CTTCCCATGCCGGTTTATATGTCACTCCTGCCGATTATTGGAGGCTGTGC
CCTTGCTGCTGTTACAGAGCTCCACTTCACATGATTGGATTTAGGGGAGC
TATGATATCGAATTTGGCATTCGTGTTTCCGAACCTTTTCCTCCAAAAAA
GGGATGAAAGGGAAATTCCGTTGGTGGGGAAAAACTAATAAGGCTTGTTT
GGCCAAGAATGTCCCCTTTTGATTCTCACACCCTTTTGCATTTGCCGGGG
GAAGGGCCCCCAAAATTGGGGGCTGCGGGCCGGGGCAAAAGGCTTTGGCC
TCAATTTGGCCCCAACTTTTTGGGTGGGGGGGGAAGGGGCCCAAAAAAAT
CTTTCCTTTCACTTGGAAAAACCCCAATTTTCAAAAATGGTTCCTCCCCA
TCAAAATTTTTTCCCCCTTGTCAATTTTTCGCAATTTGTGACACAACAAA
AAAGAAAAAAGAAAATCCTTTTTGTTTTAAAAATATCCCCCCCCCCCCCC
CCTTCCCTCCTCCCCCTTTCCCCCCCCCACCCCCCCCAAC
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