DY258378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258378 vs. ExPASy Swiss-Prot
Match: YOCS_BACSU (Uncharacterized sodium-dependent transporter yocS OS=Bacillus subtilis GN=yocS PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.196e-38 Identity = 87/202 (43.07%), Postives = 116/202 (57.43%), Query Frame = 3 Query: 201 MSQYEKIIEILTTLFPVWVILGTIIGIYKPSAVTWLETDLFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQXXXXXXXXXXLANEFFPKFTSKIISVTPLFGVI 806 M KI F +WVI+ ++G PS TW+ + + TI LG +M MGLTL +DF+ +R PW V +G +AQY I P++ F +A L L A +A G+ILV CCPGG ASNV T+++KGN ALSV +TT ST+ A V+TPLL L A + +PV L IS Q + FF K +K + PL VI Sbjct: 1 MDIIRKISHFAGQTFGIWVIVFAVLGFSFPSLFTWISSYI-TIFLGIIMFGMGLTLQADDFKELVRKPWQVIIGVIAQYTIMPLVAFGLAFGLHLPAEIAVGVILVGCCPGGTASNVMTFLAKGNTALSVAVTTISTLLAPVVTPLLIMLFAKEWLPVSPGSLFISILQAVLFPIIAGLIVKMFFRKQVAKAVHALPLVSVI 201
BLAST of DY258378 vs. ExPASy Swiss-Prot
Match: NTCP2_RABIT (Ileal sodium/bile acid cotransporter OS=Oryctolagus cuniculus GN=SLC10A2 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 8.185e-18 Identity = 45/107 (42.06%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 318 LFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPL 638 + TI L +M SMG + + F +R PW + +GFL Q+ I P+ GFV+A+ + A ++++ CCPGG ASN+ Y G++ LSV MTTCST+ A+ M PL Sbjct: 38 VLTILLALVMFSMGCNVEIKKFLGHIRRPWGIFIGFLCQFGIMPLTGFVLAVAFGIMPIQAVVVLIMGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPL 144
BLAST of DY258378 vs. ExPASy Swiss-Prot
Match: NTCP2_CRIGR (Ileal sodium/bile acid cotransporter OS=Cricetulus griseus GN=SLC10A2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.069e-17 Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = 3 Query: 318 LFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPL----LTKLLAGQ---LVPVDAAGLAI 695 + TI L +M SMG + F LR PW + VGFL Q+ I P+ GFV+++ + A +++ CCPGG ASN+ Y G++ LSV MTTCST+ A+ M PL TK+ ++P D+ G ++ Sbjct: 37 VLTILLALVMFSMGCNVELHKFLGHLRRPWGIVVGFLCQFGIMPLTGFVLSVAFGILPVQAVVVLIQGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLFIYTKMWVDSGTIVIPYDSIGTSL 169
BLAST of DY258378 vs. ExPASy Swiss-Prot
Match: NTCP2_HUMAN (Ileal sodium/bile acid cotransporter OS=Homo sapiens GN=SLC10A2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.824e-17 Identity = 48/126 (38.10%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 318 LFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAI 695 + TI L +M SMG + + F ++ PW + VGFL Q+ I P+ GF++++ + A ++++ CCPGG ASN+ Y G++ LSV MTTCST+ A+ M PL LL + VD+ + I Sbjct: 37 VLTILLALVMFSMGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDILPLQAVVVLIIGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLC--LLIYTKMWVDSGSIVI 160
BLAST of DY258378 vs. ExPASy Swiss-Prot
Match: NTCP2_MOUSE (Ileal sodium/bile acid cotransporter OS=Mus musculus GN=Slc10a2 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 4.062e-17 Identity = 53/170 (31.18%), Postives = 87/170 (51.18%), Query Frame = 3 Query: 318 LFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPL----LTKLLAGQ---LVPVDAAGLAISTFQXXXXXXXXXXLANEFFPKFTSKIISVTPLFGVI 806 + TI L +M SMG + F ++ PW + VGFL Q+ I P+ GF++++ + A ++++ CCPGG SN+ Y G++ LSV MTTCST+ A+ M PL TK+ ++P D+ G+++ N +P+ I+ + + GVI Sbjct: 37 VLTILLAMVMFSMGCNVEVHKFLGHIKRPWGIFVGFLCQFGIMPLTGFILSVASGILPVQAVVVLIMGCCPGGTGSNILAYWIDGDMDLSVSMTTCSTLLALGMMPLCLFVYTKMWVDSGTIVIPYDSIGISLVAL---VIPVSFGMFVNHKWPQKAKIILKIGSITGVI 203
BLAST of DY258378 vs. ExPASy Swiss-Prot
Match: NTCP2_RAT (Ileal sodium/bile acid cotransporter OS=Rattus norvegicus GN=Slc10a2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 5.306e-17 Identity = 47/133 (35.34%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 318 LFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPL----LTKLLAGQ---LVPVDAAGLAI 695 + TI L +M SMG + F ++ PW + VGFL Q+ I P+ GF++++ + A ++++ CCPGG SN+ Y G++ LSV MTTCST+ A+ M PL TK+ ++P D+ G+++ Sbjct: 37 VLTILLAMVMFSMGCNVEINKFLGHIKRPWGIFVGFLCQFGIMPLTGFILSVASGILPVQAVVVLIMGCCPGGTGSNILAYWIDGDMDLSVSMTTCSTLLALGMMPLCLFIYTKMWVDSGTIVIPYDSIGISL 169
BLAST of DY258378 vs. ExPASy Swiss-Prot
Match: SOAT_HUMAN (Solute carrier family 10 member 6 OS=Homo sapiens GN=SLC10A6 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 2.016e-16 Identity = 39/109 (35.78%), Postives = 65/109 (59.63%), Query Frame = 3 Query: 312 TDLFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPL 638 T + T+ +G LM S+G ++ +R PW + VG L Q+ + P +++A++ L A ++++ CCPGG SN+ T+ G++ LS+ MTTCST+ A+ M PL Sbjct: 35 TVVSTVMMGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVLIMGCCPGGTISNIFTFWVDGDMDLSISMTTCSTVAALGMMPL 143
BLAST of DY258378 vs. ExPASy Swiss-Prot
Match: SOAT_BOVIN (Solute carrier family 10 member 6 OS=Bos taurus GN=SLC10A6 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.707e-15 Identity = 36/102 (35.29%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 333 LGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPL 638 +G LM S+G ++ + +R PW + VG L Q+ + P++ +++ ++ L A ++++ CCPGG SN+ T+ G++ LS+ MTTCST+ A+ M PL Sbjct: 42 IGLLMFSLGCSVEVQKLWGHIRRPWGIAVGMLCQFGLMPLIAYLLIISFSLKPLQAIAVLIMGCCPGGTVSNIFTFWVDGDMDLSISMTTCSTMAALGMMPL 143
BLAST of DY258378 vs. ExPASy Swiss-Prot
Match: SOAT_MOUSE (Solute carrier family 10 member 6 OS=Mus musculus GN=Slc10a6 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.887e-14 Identity = 41/122 (33.61%), Postives = 70/122 (57.38%), Query Frame = 3 Query: 273 IGIYKPSAVTWLETDLFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPL 638 +G+ + + L T L + +G +M S G ++ + LR PW + VG L+Q+ + P+ +++A+ L A ++++ CPGG SNV T+ G++ LS+ MTTCST+ A+ M PL Sbjct: 22 VGMEGHANLKLLFTVLSAVMVGLVMFSFGCSVESQKLWLHLRRPWGIAVGLLSQFGLMPLTAYLLAIGFGLKPFQAIAVLMMGSCPGGTISNVLTFWVDGDMDLSISMTTCSTVAALGMMPL 143
BLAST of DY258378 vs. ExPASy Swiss-Prot
Match: SOAT_RAT (Solute carrier family 10 member 6 OS=Rattus norvegicus GN=Slc10a6 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.219e-14 Identity = 40/122 (32.79%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 273 IGIYKPSAVTWLETDLFTIGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPL 638 +G+ ++ + T L + +G +M S G ++ LR PW + VG L Q+ + P+ +++A+ L A ++++ CPGG SNV T+ G++ LS+ MTTCST+ A+ M PL Sbjct: 22 VGMEGQGSLKLVFTVLSAVMVGLVMFSFGCSVESRKLWLHLRRPWGIAVGLLCQFGLMPLTAYLLAIGFGLKPFQAIAVLIMGSCPGGTVSNVLTFWVDGDMDLSISMTTCSTVAALGMMPL 143 The following BLAST results are available for this feature:
BLAST of DY258378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258378 ID=DY258378; Name=DY258378; organism=Citrus clementina; type=EST; length=1310bpback to top |