DY258426

Overview
NameDY258426
Unique NameDY258426
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1290
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258426 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.006e-36
Identity = 95/209 (45.45%), Postives = 124/209 (59.33%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDN-GTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGVDKNRGPLDWEARMKIALGAARGLAYLHED-SILLLFIENLSHNVLLENDSPPRAPIFGLPKKPPERSQP-ISTSGQGKLSGMLPPKNARTGPFTWVKRNVYT 1066
            ++  TFA  +L  AT  F     LGEGGFG VY G +D+ G  VAVK L RN   G+REF+ EV MLS LHH NLV LIG C +G  R LVYE +  GS+E HLH +  ++  LDW  RMKIA GAA+GL +LH+  +  +++ +  S N+LL+    P+   FGL K  P   +  +ST   G   G   P+ A TG  T VK +VY+
Sbjct:   69 IAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTY-GYCAPEYAMTGQLT-VKSDVYS 275          
BLAST of DY258426 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 1.715e-36
Identity = 91/207 (43.96%), Postives = 123/207 (59.42%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGVDKNRGPLDWEARMKIALGAARGLAYLHEDSILLLFIENL-SHNVLLENDSPPRAPIFGLPKKPPERSQPISTSGQGKLSGMLPPKNARTGPFTWVKRNVYT 1066
            L + +F+L  ++ AT  F S   +GEGGFG VY G + +GT +AVK L+  ++ G+REF+ E+ M+S LHH NLVKL G C+EG    LVYE V N S+   L G  + +  LDW  R KI +G ARGLAYLHE+S L +   ++ + NVLL+    P+   FGL K   E S  IST   G   G + P+ A  G  T  K +VY+
Sbjct:  607 LMIASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTF-GYMAPEYAMRGHLT-DKADVYS 811          
BLAST of DY258426 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 8.512e-36
Identity = 87/207 (42.03%), Postives = 123/207 (59.42%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGVDKNRGPLDWEARMKIALGAARGLAYLHEDSILLLFIENL-SHNVLLENDSPPRAPIFGLPKKPPERSQPISTSGQGKLSGMLPPKNARTGPFTWVKRNVYT 1066
            L   +F L  +++AT  F  +  +GEGGFG VY GV+ +G  +AVK L+  ++ G+REF+ E+ M+S L H NLVKL G CIEG+   LVYE + N S+   L G +K R  LDW  R K+ +G A+GLAYLHE+S L +   ++ + NVLL+     +   FGL K   E +  IST   G + G + P+ A  G  T  K +VY+
Sbjct:  650 LQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTI-GYMAPEYAMRGYLT-DKADVYS 854          
BLAST of DY258426 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.112e-35
Identity = 84/191 (43.98%), Postives = 115/191 (60.21%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGVDKNRGPLDWEARMKIALGAARGLAYLHED-SILLLFIENLSHNVLLENDSPPRAPIFGLPKKPPERSQPISTSGQGKLSGMLPPKNARTG 1033
            F L DLE AT +F+   +LGEGG+G VY G + NGTEVAVK L  N    ++EF  EVE +  + H+NLV+L+G CIEG  R LVYE V++G++E  LHG  +  G L WEARMKI  G A+ LAYLHE     ++  +  + N+L++++   +   FGL K        I+T   G   G + P+ A TG
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTF-GYVAPEYANTG 360          
BLAST of DY258426 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.896e-35
Identity = 87/207 (42.03%), Postives = 123/207 (59.42%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGVDKNRGPLDWEARMKIALGAARGLAYLHEDSILLLFIENL-SHNVLLENDSPPRAPIFGLPKKPPERSQPISTSGQGKLSGMLPPKNARTGPFTWVKRNVYT 1066
            L   +F L  +++AT  F  +  +GEGGFG VY GV+ +G  +AVK L+  ++ G+REF+ E+ M+S L H NLVKL G CIEG+   LVYE + N S+   L G +K R  LDW  R KI +G A+GLAYLHE+S L +   ++ + NVLL+     +   FGL K   + +  IST   G + G + P+ A  G  T  K +VY+
Sbjct:  652 LQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTI-GYMAPEYAMRGYLT-DKADVYS 856          
BLAST of DY258426 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 5.517e-35
Identity = 88/202 (43.56%), Postives = 122/202 (60.40%), Query Frame = 2
Query:  461 TFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGVDKNRGPLDWEARMKIALGAARGLAYLHEDSILLLFIENL-SHNVLLENDSPPRAPIFGLPKKPPERSQPISTSGQGKLSGMLPPKNARTGPFTWVKRNVY 1063
            TF  S+L+ AT+ F     LGEGGFG VY G +++G EVAVKLL+  ++ G  +F+AE+  +S + HRNLVKL G C EG  R LVYE + NGS++  L G  +    LDW  R +I LG ARGL YLHE++ L +   ++ + N+LL++   P+   FGL K   ++   IST   G + G L P+ A  G  T  K +VY
Sbjct:  680 TFTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFG--EKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTI-GYLAPEYAMRGHLT-EKTDVY 877          
BLAST of DY258426 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 5.517e-35
Identity = 92/206 (44.66%), Postives = 116/206 (56.31%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEV-AVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGVDKNRGPLDWEARMKIALGAARGLAYLHEDSILLLFIENLS-HNVLLENDSPPRAPIFGLPKKPPERSQP-ISTSGQGKLSGMLPPKNARTGPFTWVKRNVYT 1066
            +TF   +L +AT  F S   LGEGGFG V+ G ++   +V A+K L RN   G REF+ EV  LS   H NLVKLIG C EG  R LVYE +  GS+E HLH +   + PLDW  RMKIA GAARGL YLH+     +   +L   N+LL  D  P+   FGL K  P   +  +ST   G   G   P  A TG  T+ K ++Y+
Sbjct:   89 QTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTY-GYCAPDYAMTGQLTF-KSDIYS 292          
BLAST of DY258426 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 4.671e-34
Identity = 82/206 (39.81%), Postives = 122/206 (59.22%), Query Frame = 2
Query:  452 SVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMD----------NGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLH-GVDKNRGPLDWEARMKIALGAARGLAYLHEDSILLLFIENLSHNVLLENDSPPRAPIFGLPKKPPERSQP-ISTSGQGKLSGMLPPKNARTG 1033
            +VK+F+ ++L+ AT  F S  ++GEGGFGCV+ G +D          +G  +AVK L  +   G RE++ E+  L +L H NLVKLIG C+E   R LVYE +H GS+E+HL    +K+  PL W  R+K+AL AA+GLA+LH D + +++ +  + N+LL++D   +   FGL +  P   Q  +ST   G   G   P+   TG
Sbjct:   45 TVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTF-GYAAPEYVSTG 249          
BLAST of DY258426 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 4.671e-34
Identity = 78/191 (40.84%), Postives = 114/191 (59.69%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGVDKNRGPLDWEARMKIALGAARGLAYLHED-SILLLFIENLSHNVLLENDSPPRAPIFGLPKKPPERSQPISTSGQGKLSGMLPPKNARTG 1033
            + L +LE AT     + ++GEGG+G VY G++ +GT+VAVK L  N    ++EF  EVE++ R+ H+NLV+L+G C+EG  R LVY+ V NG++E  +HG   +  PL W+ RM I LG A+GLAYLHE     ++  +  S N+LL+     +   FGL K     S  ++T   G   G + P+ A TG
Sbjct:  142 YTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTF-GYVAPEYACTG 331          
BLAST of DY258426 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 6.100e-34
Identity = 84/202 (41.58%), Postives = 120/202 (59.41%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGVDKNRGPLDWEARMKIALGAARGLAYLHEDSILLLFIENL-SHNVLLENDSPPRAPIFGLPKKPPERSQPISTSGQGKLSGMLPPKNARTGPFTWVKRNVYT 1066
            F    +E AT KFS   I+G GGFG V+ GV+ NGTEVA+K L++ ++ G REF  EV ++++LHHRNLVKL+G C+EG  + LVYE V N S++  L    K +G LDW  R  I  G  RG+ YLH+DS L +   +L + N+LL+ D  P+   FG+ +         +T       G +PP+  R G F+  + +VY+
Sbjct:  325 FDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-NGTEVAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFDPTK-QGQLDWTKRYNIIRGITRGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFS-TRSDVYS 523          
The following BLAST results are available for this feature:
BLAST of DY258426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
PBS1_ARATH1.006e-3645.45Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
Y1534_ARATH1.715e-3643.96Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH8.512e-3642.03Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH1.112e-3543.98Probable receptor-like protein kinase At2g42960 OS... [more]
Y5343_ARATH1.896e-3542.03Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH5.517e-3543.56Probable LRR receptor-like serine/threonine-protei... [more]
RLCK7_ARATH5.517e-3544.66Probable serine/threonine-protein kinase RLCKVII O... [more]
Y3545_ARATH4.671e-3439.81Probable receptor-like protein kinase At3g55450 OS... [more]
Y1154_ARATH4.671e-3440.84Probable serine/threonine-protein kinase At1g01540... [more]
CRK14_ARATH6.100e-3441.58Cysteine-rich receptor-like protein kinase 14 OS=A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI1CH08FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258426 ID=DY258426; Name=DY258426; organism=Citrus clementina; type=EST; length=1290bp
GTTTGATAATACCACAGCAGTTCTGACATATGACAGACTGTGGCATAAGA
AAGTTCCTTTAAATTTGACTCTATTTGGTATTTATGAAGTCATTTATATC
AGCTATCCAGGTATTCCTTCTTCTCCGCCATATGAGAGTTCTACAGAGAG
TGGTCCAAGTGTTAGTGTTGGATCTCTCCCTTTCTCTGCAAACTTTGGAA
ATAAAAATCAGCGGATGAATTTCAGAACCATTGCTATCATTGCTTTGTCT
GCATTTGTACTCTTACTGGTTTTTGTTGGAGCAATATCCATCCTTATAAA
ATGGAGGAAGGCTAGAAAACCATCAAGTGCTGTTGGCCCTGCCTTTGCAT
CATCTATAAACAAAAGATCCGGCATTGGGTCTATCTTATCTAGTAGTATT
GCTAGCTCAACCTCAGTGTCGCTCATGTCCACCATGGCTACTTGTATCCT
CTCTGTTAAAACATTTGCACTTTCTGATCTTGAGAAGGCAACAGAGAAAT
TCAGTTCCAAGAGAATTTTGGGGGAAGGAGGTTTTGGGTGTGTTTACCAT
GGTGTTATGGACAATGGAACTGAAGTTGCAGTGAAGCTGCTAACAAGAAA
TAATCAGAATGGGGACCGTGAATTTATTGCAGAAGTAGAGATGCTAAGCA
GATTACATCATCGTAATCTCGTGAAATTGATCGGTATATGCATTGAAGGA
CGCACGCGCTGCTTGGTGTATGAACTTGTTCACAATGGCAGTGTTGAGTC
ACACCTGCATGGTGTTGACAAGAATAGAGGACCTCTTGACTGGGAAGCAC
GAATGAAGATTGCCCTTGGAGCAGCAAGAGGACTGGCCTATCTTCATGAA
GATTCAATCCTCCTGTTATTCATAGAGAATTTAAGCCATAATGTATTGCT
AGAAAATGACTCCCCCCCAAGGGCCCCGATTTTTGGGTTGCCAAAAAAAC
CACCTGAAAGGAGTCAGCCAATTTCCACCTCCGGCCAGGGGAAACTTTCG
GGTATGTTGCCCCCCAAAAATGCAAGGACCGGGCCTTTTACCTGGGTAAA
AAGGAATGTTTACACCCCTTGGGGGGTTGGGCCGCGCTTGGCCCTTCCTT
CTTGGGAAAAAAAACCCCGGGGAAAATTTTTCCCCCCCCCCCCGGGGGAA
CGGAAAAAAATTTTGGGGGCTCTGGGGGCCCGCCCCCCCCCACTCCAGAC
AAACCCAAAAAAAAAAAGGGGTGTGTGAAGGAACGTTTTGTGGGGTGGTC
TCCCCCTTCCTCTTTGTGGGCGGGGCGAGAAAAACCAACC
back to top