DY258448

Overview
NameDY258448
Unique NameDY258448
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1306
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1130 contig Ccv1_Contig1130:1..1306. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258448 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.613e-32
Identity = 76/154 (49.35%), Postives = 100/154 (64.94%), Query Frame = 2
Query:    5 KICSQIILCTCDGSRGVSMRLVRVMPDNNPKSSGGFHQPLCSTWDMPLVRMQNQLLLNRTQQSILKCLGELCDRMPNPMT*SSVDRIQMTSLPIVSFTIGEKILDLTPDHHSPLSVPRRCNSEYIVDITPLHVAPPLGPLWILREVFISPSPTV 466
            KICSQI LCT DG+RGVSM +  V+ +N  KSS   H  +CS  +M +V MQNQL  N+T++ I+  + ELCDRMP+PM  S+VD  Q++S+P VSFTIG KI DL P+ +  L V     ++ I   T   + PP GPLWIL +VF+    TV
Sbjct:  347 KICSQINLCTFDGTRGVSMGIESVVDENAGKSSDSLHDGMCSVCEMTVVWMQNQLRQNQTKERIINYINELCDRMPSPMGQSAVDCGQLSSMPTVSFTIGGKIFDLAPEEYI-LKVGEGPVAQCISGFTAFDIPPPRGPLWILGDVFMGRYHTV 499          
BLAST of DY258448 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 7.742e-28
Identity = 69/154 (44.81%), Postives = 95/154 (61.69%), Query Frame = 2
Query:    5 KICSQIILCTCDGSRGVSMRLVRVMPDNNPKSSGGFHQPLCSTWDMPLVRMQNQLLLNRTQQSILKCLGELCDRMPNPMT*SSVDRIQMTSLPIVSFTIGEKILDLTPDHHSPLSVPRRCNSEYIVDITPLHVAPPLGPLWILREVFISPSPTV 466
            KICSQ+ LCT DG+RGVS  +  V+ D   KS+G    P+CS  +M +V MQNQL  N+TQ  IL  + +LC+R+P+PM  S+VD   + S+P + FTIG K   L P+ +  L V     ++ I   T + + PP GPLWIL +VF+ P  TV
Sbjct:  342 KICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYI-LKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTV 494          

HSP 2 Score: 21.1718 bits (43), Expect = 7.742e-28
Identity = 8/19 (42.11%), Postives = 11/19 (57.89%), Query Frame = 3
Query:  453 PHPLYFHYADMTVGFADAA 509
            P+   F Y  + +GFA AA
Sbjct:  490 PYHTVFDYGKLRIGFAKAA 508          
BLAST of DY258448 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 7.363e-27
Identity = 67/154 (43.51%), Postives = 93/154 (60.39%), Query Frame = 2
Query:    5 KICSQIILCTCDGSRGVSMRLVRVMPDNNPKSSGGFHQPLCSTWDMPLVRMQNQLLLNRTQQSILKCLGELCDRMPNPMT*SSVDRIQMTSLPIVSFTIGEKILDLTPDHHSPLSVPRRCNSEYIVDITPLHVAPPLGPLWILREVFISPSPTV 466
            KICSQ+ LCT DG  GVS  +  V+ D   +S+G    P+C+  +M +V MQNQL  N+TQ  IL  + +LCD++P+PM  SSVD   + S+P +SFTIG K   L P+ +  L V     ++ I   T + + PP GPLWIL +VF+    TV
Sbjct:  343 KICSQVGLCTFDGKHGVSAGIKSVVDDEAGESNGLQSGPMCNACEMAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYI-LKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYHTV 495          
BLAST of DY258448 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.254e-23
Identity = 63/158 (39.87%), Postives = 97/158 (61.39%), Query Frame = 2
Query:    5 KICSQIILCTCDGSRGVSMRLVRVMPDNNPKSSGGFHQPL----CSTWDMPLVRMQNQLLLNRTQQSILKCLGELCDRMPNPMT*SSVDRIQMTSLPIVSFTIGEKILDLTPDHHSPLSVPRRCNSEYIVDITPLHVAPPLGPLWILREVFISPSPTV 466
            KICSQ+ LC+ DGS   SM +  V+  +  KSSG    P+    C+ W   +V MQNQ+  N T+++I+  + +LC+R+P+PM  S+VD   ++S+P ++FT+G K  +L+P+ +  L V     ++ I   T + VAPP GPLWIL +VF+    TV
Sbjct:  309 KICSQMKLCSFDGSHDTSMIIESVVDKSKGKSSG---LPMRCVPCARW---VVWMQNQIRQNETEENIINYVDKLCERLPSPMGESAVDCSSLSSMPNIAFTVGGKTFNLSPEQY-VLKVGEGATAQCISGFTAMDVAPPHGPLWILGDVFMGQYHTV 459          

HSP 2 Score: 21.557 bits (44), Expect = 2.254e-23
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  468 FHYADMTVGFADAA 509
            F Y ++ VGFA+AA
Sbjct:  460 FDYGNLRVGFAEAA 473          
BLAST of DY258448 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 4.784e-18
Identity = 55/163 (33.74%), Postives = 87/163 (53.37%), Query Frame = 2
Query:    5 KICSQIILCTCDGSRGVSMRLVRVMPDNNPKSSGGFHQPLCSTWDMPLVRMQNQLLLNRTQQSILKCLGELCDRMPNPMT*SSVDRIQMTSLPIVSFTIGEKILDLTPDHHSPLSVPRRCNSEYIVDITPLHVAPPLGPLWILREVFISPSPTVLSLRRHDSG 493
            K+CSQ+ LC  DG R VS  +  V+   N  S       +CS  +M +V ++NQL  N+T++ IL    +LC+R+P+P   S+V   Q++ +P ++FTI  K   LTP+ +  + + +   +  I       + PP GPLWIL +VF+    TV    +   G
Sbjct:  335 KVCSQVGLCMFDGKRSVSNGIESVVDKENLGSDA-----MCSVCEMAVVWIENQLRENKTKELILNYANQLCERLPSPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYI-VKLEQGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRIG 491          
The following BLAST results are available for this feature:
BLAST of DY258448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ASPR_CUCPE2.613e-3249.35Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPR_HORVU7.742e-2844.81Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR1_ORYSJ7.363e-2743.51Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
CYPR1_CYNCA2.254e-2339.87Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPRX_ORYSJ4.784e-1833.74Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI1DD02FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258448 ID=DY258448; Name=DY258448; organism=Citrus clementina; type=EST; length=1306bp
TCTTAAAATTTGCTCACAGATTATTTTGTGCACATGTGATGGGTCCCGGG
GAGTGAGTATGCGCCTCGTCAGGGTCATGCCTGATAACAACCCTAAATCA
TCTGGTGGTTTCCATCAGCCACTGTGCTCTACATGGGATATGCCTCTTGT
GCGTATGCAGAACCAGCTTCTGCTCAATCGAACACAACAGAGCATTCTTA
AGTGTCTCGGTGAACTCTGTGATCGGATGCCTAATCCTATGACATAATCA
TCTGTTGACCGGATCCAAATGACTTCCTTACCTATTGTTTCCTTTACTAT
TGGTGAAAAGATATTAGACCTTACGCCTGATCATCACAGTCCTCTCAGTG
TGCCACGGAGATGCAACTCAGAGTATATAGTGGATATCACACCTCTCCAT
GTTGCCCCACCTCTAGGACCCCTCTGGATCTTGCGAGAGGTTTTTATATC
TCCCTCACCCACTGTACTTTCACTACGCCGACATGACAGTGGGATTTGCT
GACGCTGCTGTAACATGAGTTTATATCTATATGCCCATTGAACCATACCA
CAAGTGATTTCCGTCGTATCGCTGGAGTGTCGCTCCTTGGGCATATGCTA
CGTTACACTACTCCCTAAGACGAAGCCTTACATGACGGTTCTGTGTATAC
GCTCTGATGTATCACAGCTGTGGACAAGCCCTAGACGTTGAACTTAGTAT
ATATGGTCTTAGCCTGGACTCTGATTAGGTGTCAATACAAAAAAAAAGAA
AAAAACCCCCCCTTTCTTGCCCTTAATTTCCTGTTATAGAAAGGACATTG
CTAAACAATTTGTGCCAACTAAAAGGAAAATATCAAAAAAAAAAAAAAAC
ATCCTTTCCCCCCCAACTGATTTCCCCTAAAAAAAAACCATTTACTAGGG
TCTTTGCTGTTTCCAGCAGCCCCTGGCCCCTGCCACAAAAATCCCTTATT
TTCCCTCCGCCCAAAAAACCCCTAAAATCACCCGGTTAAAAAAAGCCCCT
CCGGGTTCCCATGGAAACCCCCGTTTCGTGCCCCCAAGGCTTCTCAATTC
CCATTTTTTTGAAAAAACCCTTTTCCCTTAATGAAAGAAAACACCCCCCC
CGGACCCCTTCCAAAAGGGGGGGTAAATACCCCGGGTCGGGGTTCTCCCC
TCCCCCCACCTTCCCCAAAAACCCCCTTTCCCCCCTTTTAAAAATTCCCC
CCCCCCCCCCCAAAGAAAGGGGTCTTCCCAGGGGAAAAGAAAAACAACCC
CCCCGGGGGGGTGTGGCGGGGGGGGAGTCTCCCTGCGGGGAAAAAAGAAG
GGGGAA
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