DY258741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258741 vs. ExPASy Swiss-Prot
Match: LMBD1_ARATH (LIMR family protein At3g08930 OS=Arabidopsis thaliana GN=At3g08930 PE=2 SV=2) HSP 1 Score: 340.502 bits (872), Expect = 2.380e-110 Identity = 167/226 (73.89%), Postives = 186/226 (82.30%), Query Frame = 1 Query: 103 MGDFNXXXXXXXXXXXXXXXXXNVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDAVLVFFVIPFAMFYYEGDQDKSVGKRIKSALIWVIMTAIVCALVLGILYGLVGKVDFTVRHLSSTTTNFPTSWEFXXXXXXXXXXXXXXXSAYLANETSEKTWTMRTTFPEYVVALATIVGSVLFSIFGG 780 MGDFN ++YLLVNYQHPDDANQAYFPKFVVV GLS+A ISILMLPADVANR ACRHAIYNGACNLTLPMKDLWLA+YI+DA+LVFFVIPFAMF+YEGDQDK++GKRIKSALIWV+ TA+VCALVLGILYG++GKVDF+VRHL+S T+ FPTSW+F SA+ AN TSEKTWTMRTTFPEYVVALATIVGSVLF+IFGG Sbjct: 1 MGDFNLALVIVAIVVCVIVFISSIYLLVNYQHPDDANQAYFPKFVVVFGLSIAMISILMLPADVANRHACRHAIYNGACNLTLPMKDLWLAIYIVDAILVFFVIPFAMFFYEGDQDKTLGKRIKSALIWVVTTAVVCALVLGILYGVIGKVDFSVRHLASATSTFPTSWQF-SNTQPCIGNTARQCSAFTANPTSEKTWTMRTTFPEYVVALATIVGSVLFTIFGG 225 HSP 2 Score: 78.5666 bits (192), Expect = 2.380e-110 Identity = 43/67 (64.18%), Postives = 51/67 (76.12%), Query Frame = 2 Query: 764 FRYLVGVGIACLPLELIFFFIRRPKAVITRSQYNKEATELGKKSRKFEKSSLIPFFQEKRRGFQGKK 964 F GVGIACLPL LI FIRRPKAVITRSQY KEATELGKK+R+ +K++ QE+R G +G+K Sbjct: 220 FTIFGGVGIACLPLGLITAFIRRPKAVITRSQYIKEATELGKKARELKKAA-DGLHQEERSGAKGRK 285
BLAST of DY258741 vs. ExPASy Swiss-Prot
Match: LMBD2_ARATH (LIMR family protein At5g01460 OS=Arabidopsis thaliana GN=At5g01460 PE=2 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 4.581e-93 Identity = 185/306 (60.46%), Postives = 211/306 (68.95%), Query Frame = 1 Query: 103 MGDFNXXXXXXXXXXXXXXXXXNVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDAVLVFFVIPFAMFYYEGDQDKSVGKRIKSALIWVIMTAIVCALVLGILYGLVGKVDFTVRHLSSTTTNFPTSWEFXXXXXXXXXXXXXXXSAYLANETSEKTWTMRTTFPEYVVALATIVGSVLFSIFGGCW-DCLFAT*TYLFLHPTSKGSHHSLTV**GSN*TRXXXXXXXXXXLDTLLPGEKKGVPREKKWRKNCEVLGKKNLLHLE 1017 MGDFN ++YLLVNYQHPDDANQAYFPKFVVV GLS+A ISILMLPADVANR ACRH+IYNGACNLTLPMKDLWLAVYI+DAVLVFF+IPFAMF+YEGDQDK++GKRIKSALIWV+ TA+VCALVLGILYG++GKVDF+VRHLSS TT FPTSW+F SAY AN SEKTW+MRTTFPEYVVALATIVGSVLF+IFGG CL F+ S + T L E++ + +KWRKN + + +K LL LE Sbjct: 1 MGDFNLALVIVAIVVCVIVFISSIYLLVNYQHPDDANQAYFPKFVVVFGLSIAMISILMLPADVANRHACRHSIYNGACNLTLPMKDLWLAVYIVDAVLVFFIIPFAMFFYEGDQDKALGKRIKSALIWVVTTAVVCALVLGILYGVIGKVDFSVRHLSSATTTFPTSWQF-SNNQPCIGNTARQCSAYTANAASEKTWSMRTTFPEYVVALATIVGSVLFTIFGGVGIACLPLGLITAFIRRPKAVITRSQYI---KEATELGKKARDLKKAADALHQEERSGAKGRKWRKNVKAV-EKELLQLE 301
BLAST of DY258741 vs. ExPASy Swiss-Prot
Match: LMBD1_ORYSJ (LIMR family protein Os06g0128200 OS=Oryza sativa subsp. japonica GN=Os06g0128200 PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 5.997e-85 Identity = 172/303 (56.77%), Postives = 198/303 (65.35%), Query Frame = 1 Query: 103 MGDFNXXXXXXXXXXXXXXXXXNVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDAVLVFFVIPFAMFYYEGDQDKSVGKRIKSALIWVIMTAIVCALVLGILYGLVGKVDFTVRHLSSTTTNFPTSWEFXXXXXXXXXXXXXXXSAYLANETSEKTWTMRTTFPEYVVALATIVGSVLFSIFGGCW-DCLFAT*TYLFLHPTSKGSHHSLTV**GSN*TRXXXXXXXXXXLDTLLPGEKKGVPREKKWRKNCEVLGKKNLL 1008 MGDFN +VYLL+NYQHPDDANQAYFPK VVVLG++VA +SILMLPADVANRQACR AIY+GAC+LTLPMK LWLAVYI DAVLVF VIPFAMFYYEGDQDKSVGKR+ SAL+WV ++A+VC L+LGILYGLVGKVDFTVRHLSS FP S+ +AY A S+ TWTMR TFPEYVVALATIVGSVLF+IFGG CL + F+ S + T L E+K + +KWRKN + LGK+ +L Sbjct: 1 MGDFNVALVIVAAVVSVLVLLVSVYLLINYQHPDDANQAYFPKLVVVLGITVALLSILMLPADVANRQACRRAIYSGACSLTLPMKTLWLAVYIADAVLVFLVIPFAMFYYEGDQDKSVGKRLTSALLWVAVSAVVCGLILGILYGLVGKVDFTVRHLSSAVETFPNSFTSFSTGQPCISTSPKQCAAYTAPANSQTTWTMRATFPEYVVALATIVGSVLFTIFGGVGIACLPLGLIFSFVRRPKAVITRSQYI---KEATELGKKARELKKAAEALHQEEKSGKKGRKWRKNVKALGKELVL 300
BLAST of DY258741 vs. ExPASy Swiss-Prot
Match: Y3610_DICDI (LIMR family protein DDB_G0293610 OS=Dictyostelium discoideum GN=DDB_G0293610 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.567e-19 Identity = 68/226 (30.09%), Postives = 101/226 (44.69%), Query Frame = 1 Query: 169 NVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDAVLVFFVIPFAMFYYEGDQ-DKSVGKRIKSALIWVIMTAIVCALVLGILYGLVGKVDF-TVRHLS--------------STTTNFPT------SWEFXXXXXXXXXXXXXXXSAYLANETSEKTWTMRTTFPEYVVALATIVGSVLFSIFGG 780 ++YL+ +QHPDD N AYFPK +V+LG+++AA SILMLP DVAN+ G PM LW+ +YI+ AV + PFAMF+YE ++ D + G +I A A + +LY G + T+ LS + TT P S Y+ ++ R + +++ + G +LF IFGG Sbjct: 21 SLYLIAYFQHPDDKNVAYFPKIIVILGITLAATSILMLPLDVANQGG------KGG----FPMDILWIVIYIVVAVFAIVICPFAMFFYESEEADPAAGSQIAGAFKGTFAILFAFAALTIVLYVFFGVAEIPTIVILSRFQIINYPIATDSINITTTLPEIASIVGGGNDKIKLDPGNPELLGNGSEYVEYRLDKEFLQFRVSIALFIITMVAFFGWLLFIIFGG 236
BLAST of DY258741 vs. ExPASy Swiss-Prot
Match: Y3707_DICDI (LIMR family protein DDB_G0283707 OS=Dictyostelium discoideum GN=DDB_G0283707 PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.664e-18 Identity = 52/129 (40.31%), Postives = 74/129 (57.36%), Query Frame = 1 Query: 169 NVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDAVLVFFVIPFAMFYYEGDQ-DKSVGKRIKSAL---IWVIMTAIVCALVLGILYGL 543 ++YL+ +QHPDD N AYFPK +V+LGL++AA SILMLP DVAN +G PM LW+ +YI AV + PFAMF+YE ++ D G +I A ++ +VL + +G+ Sbjct: 21 SLYLIAYFQHPDDKNVAYFPKIIVILGLTLAATSILMLPLDVAN---------DGGSG-GFPMDILWIIIYIAVAVFAVVICPFAMFFYESEEADPGAGSQIAGAFKGTFAILFAFTALTIVLYVFFGV 139 The following BLAST results are available for this feature:
BLAST of DY258741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258741 ID=DY258741; Name=DY258741; organism=Citrus clementina; type=EST; length=1082bpback to top |