DY258748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA01_ARATH (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana GN=RPP0A PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 7.273e-29 Identity = 84/166 (50.60%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 139 KVELIELMEEWVDWKVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATLLAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVRAGVSTSTDLALGVSYPTLNDAPRLIYNV*KIVVGAAHAPEY 636 K +L E+ EE +KV APA V ID VV P + GL+PS TSFF V NI T I G VE ITPV LI K D+VGSSEA LLA IRPFSYGLVV VY G ++ P E+ AGVS T L+L +SYPT+ AP + N K V+ A A EY Sbjct: 95 KGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATEY 260
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA02_ARATH (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana GN=RPP0B PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.620e-28 Identity = 83/166 (50.00%), Postives = 97/166 (58.43%), Query Frame = 1 Query: 139 KVELIELMEEWVDWKVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATLLAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVRAGVSTSTDLALGVSYPTLNDAPRLIYNV*KIVVGAAHAPEY 636 K +L E+ EE +KV APA V ID VV P + GL+PS TSFF V NI T I G VE ITPV LI + D+VGSSEA LLA IRPFSYGLVV VY G ++ P E+ +G+S T LAL VSYPTL AP + N K + A A EY Sbjct: 94 KGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATEY 259
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA0_SOYBN (60S acidic ribosomal protein P0 OS=Glycine max PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.764e-28 Identity = 83/166 (50.00%), Postives = 97/166 (58.43%), Query Frame = 1 Query: 139 KVELIELMEEWVDWKVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATLLAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVRAGVSTSTDLALGVSYPTLNDAPRLIYNV*KIVVGAAHAPEY 636 K +L E+ EE +KV APA V ID VV P + GL+PS TSFF V NI T I G VE ITPV LI K D+VGSSEA LLA IRPFSYGLVVL VY G ++ P + AGVS T L+L +SYPTL AP + N K V+ A +Y Sbjct: 95 KGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVETDY 260
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA03_ARATH (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana GN=RPP0C PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.610e-28 Identity = 82/166 (49.40%), Postives = 97/166 (58.43%), Query Frame = 1 Query: 139 KVELIELMEEWVDWKVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATLLAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVRAGVSTSTDLALGVSYPTLNDAPRLIYNV*KIVVGAAHAPEY 636 K +L E+ EE +KV APA V ID VV P + GL+PS TSFF V NI T I G VE ITPV LI + D+VGSSEA LLA IRPFSYGLVV VY G ++ P E+ +G+S T LAL VSYPTL AP + N K + A A +Y Sbjct: 94 KGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDY 259
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA0_ORYSJ (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica GN=Os08g0130500 PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 1.517e-26 Identity = 77/166 (46.39%), Postives = 96/166 (57.83%), Query Frame = 1 Query: 139 KVELIELMEEWVDWKVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATLLAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVRAGVSTSTDLALGVSYPTLNDAPRLIYNV*KIVVGAAHAPEY 636 K +L E+ EE +KV APA V +D VV P + GL+PS TSFF V NI T I G VE ITPV LI K D+VGSSE+ LLA IRPFSYGLV+ VY G ++ P E+ +GVS ++L +SYPT+ AP + N K V+ A EY Sbjct: 95 KGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETEY 260
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA0_MAIZE (60S acidic ribosomal protein P0 OS=Zea mays GN=RP-P0 PE=1 SV=3) HSP 1 Score: 117.087 bits (292), Expect = 2.190e-25 Identity = 76/166 (45.78%), Postives = 93/166 (56.02%), Query Frame = 1 Query: 139 KVELIELMEEWVDWKVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATLLAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVRAGVSTSTDLALGVSYPTLNDAPRLIYNV*KIVVGAAHAPEY 636 K +L E+ EE +KV APA V +D VV P + GL+PS TSFF V NI T I G VE ITPV LI K ++VGSSE+ LLA IRPFSYGL V VY G ++ P E+ GVS L+L +SYPTL P + N K V+ A +Y Sbjct: 95 KGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSESALLAKLGIRPFSYGLQVTSVYEDGSVFSPEVLDLSEEDLIEKFATGVSMVASLSLAISYPTLAAVPHMFINGYKNVLAVAVETDY 260
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA0_LUPLU (60S acidic ribosomal protein P0 OS=Lupinus luteus PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 7.789e-23 Identity = 77/163 (47.24%), Postives = 88/163 (53.99%), Query Frame = 1 Query: 148 LIELMEEWVDWKVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATLLAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVRAGVSTSTDLALGVSYPTLNDAPRLIYNV*KIVVGAAHAPEY 636 L E+ EE +KV APA V ID VV P + GL+PS TSFF V NI T I G VE ITPV LI K D+VGSSEA LLA IRPFSYGLVVL VY G ++ P E+ GVS P + AP + N K V+ A A EY Sbjct: 98 LKEVSEEVAKYKVGAPACVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFKPEVLDLTEDDLLEKFAIGVSQCYFSDTSHFIPNPSAAPHVFINAYKNVLAVAVATEY 260
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA0_CHERU (60S acidic ribosomal protein P0 OS=Chenopodium rubrum PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 3.866e-22 Identity = 72/147 (48.98%), Postives = 84/147 (57.14%), Query Frame = 1 Query: 139 KVELIELMEEWVDWKVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATLLAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVRAGVSTSTDLALGVSYPTLNDAP 579 K +L ++ EE +KV APA V ID VV P + GL+PS TSFF V NI T I G VE IT V LI K ++VGSSEA LLA IRPFSYGL V VY G ++ P GVS T L+L +SYPTL AP Sbjct: 95 KGDLNQVREEISKYKVGAPARFGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITAVELIKKGEKVGSSEAALLAKLGIRPFSYGLNVESVYDDGSVFSPEVLDLTEDDLLARFATGVSMVTSLSLAISYPTLAAAP 241
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA0_CERCA (60S acidic ribosomal protein P0 OS=Ceratitis capitata GN=RpLP0 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.867e-17 Identity = 57/165 (34.55%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 139 KVELIELMEEWVDWKVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATLLAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVRAGVSTSTDLALGVSYPTLNDAPRLIYNV*KIVVGAAHAPE 633 K +L E+ ++ ++ KV APA + + ++ ++ GL P TSFF +I T I G +E I V ++ D+VG+SEATLL I PFSYGL + VY G I+ P + +AGV+ ++L + YPT+ AP I N K ++ A + E Sbjct: 92 KGDLAEVRDKLLESKVRAPARAGAIAPLPVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLAITQVYDSGSIFSPEILDIKPEDLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTE 256
BLAST of DY258748 vs. ExPASy Swiss-Prot
Match: RLA0_DROME (60S acidic ribosomal protein P0 OS=Drosophila melanogaster GN=RpLP0 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.387e-17 Identity = 58/165 (35.15%), Postives = 85/165 (51.52%), Query Frame = 1 Query: 139 KVELIELMEEWVDWKVVAPALRW*VCSIDGVVLPEDEGLNPS*TSFFHVHNILTVIMAGIVESITPVVLIVKVDRVGSSEATLLAHFVIRPFSYGLVVLPVYSKGFIYCP*GRRTD*RSSNEEVRAGVSTSTDLALGVSYPTLNDAPRLIYNV*KIVVGAAHAPE 633 K +L E+ ++ ++ KV APA + + ++ ++ GL P TSFF +I T I G +E I V ++ D+VG+SEATLL I PFSYGL+V VY G I+ P + + GV+ + L V YPT+ AP I N K ++ A E Sbjct: 92 KGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTE 256 The following BLAST results are available for this feature:
BLAST of DY258748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258748 ID=DY258748; Name=DY258748; organism=Citrus clementina; type=EST; length=1228bpback to top |