DY258752

Overview
NameDY258752
Unique NameDY258752
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1257
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11127 contig Ccv1_Contig11127:420..1676. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258752 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.884e-48
Identity = 113/288 (39.24%), Postives = 158/288 (54.86%), Query Frame = 3
Query:    6 GSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFV-XXXXXXXXXXXXXSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGDSA--VSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFHL-SGKTEVKVPTVVLLF 857
            G GEY   + +GTP      ++DTGSD++W QC PC +C+SQ  P+F+P  S SF+T+PC S  C+ L S  CN  N C Y   YGDGS T G  +TET TF  + V  +A GCG DN+G                 S P+Q G     +FSYC+    +S+ PS++  G +A  V   +  T L+ +    T+YY+ L GI+VGG ++ GI +S F+L   G GG+IIDSGT++T L + AY A+  AF    +        S   TCF   S  + V+VP + + F
Sbjct:   92 GDGEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFSTLPCESQYCQDLPSETCN-NNECQYTYGYGDGSTTQGYMATETFTFETSSVPNIAFGCGEDNQGFGQGNGAGLIGMGWGPLSLPSQLG---VGQFSYCMTSYGSSS-PSTLALGSAASGVPEGSPSTTLIHSSLNPTYYYITLQGITVGGDNL-GIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLSTCFQQPSDGSTVQVPEISMQF 373          
BLAST of DY258752 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 3.007e-46
Identity = 111/289 (38.41%), Postives = 157/289 (54.33%), Query Frame = 3
Query:    6 GSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFV-XXXXXXXXXXXXXSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGDSAVSRTARF--TPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDP-AGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFHL-SGKTEVKVPTVVLLF 857
            G GEY   L +GTP +    ++DTGSD++W QC PC +C++Q+ P+F+P  S SF+T+PC S LC+ L S  C+  N C Y   YGDGS T G   TETLTF    +  +  GCG +N+G                 S P+Q       KFSYC+    +S  PS+++ G  A S TA    T L+ + ++ TFYY+ L G+SVG   +  I  S F L+   G GG+IIDSGT++T     AY ++R  F +  +        S FD CF   S  + +++PT V+ F
Sbjct:   91 GDGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPIFNPQGSSSFSTLPCSSQLCQALSSPTCS-NNFCQYTYGYGDGSETQGSMGTETLTFGSVSIPNITFGCGENNQGFGQGNGAGLVGMGRGPLSLPSQLD---VTKFSYCMTPIGSST-PSNLLLGSLANSVTAGSPNTTLIQSSQIPTFYYITLNGLSVGSTRL-PIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQINLPVVNGSSSGFDLCFQTPSDPSNLQIPTFVMHF 373          
BLAST of DY258752 vs. ExPASy Swiss-Prot
Match: ASPL2_ARATH (Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.008e-17
Identity = 73/267 (27.34%), Postives = 111/267 (41.57%), Query Frame = 3
Query:   12 GEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTD-----PVFDPAKSRSFATVPCRSPLCRKL-DSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFR--------GTRVARVALGCGHDNEGLFVXXXXXXXXXXXXXSFPTQTGRRF------NRKFSYCLVDRSTSAKPSSMVFGDSAVSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRA 752
            G YFT++ +G+PP+  ++ +DTGSD++WI C PC KC ++T+      +FD   S +   V C    C  +  S  C     C Y + Y D S + G F  + LT          G     V  GCG D  G                   T    +        R FS+CL     + K   +       S   + TP++ N      Y V L+G+ V G  +  +  S+ +     NGG I+DSGT++    +  Y +L +   A
Sbjct:   72 GLYFTKIKLGSPPKEYHVQVDTGSDILWINCKPCPKCPTKTNLNFRLSLFDMNASSTSKKVGCDDDFCSFISQSDSCQPALGCSYHIVYADESTSDGKFIRDMLTLEQVTGDLKTGPLGQEVVFGCGSDQSGQLGNGDSAVDGVMGFGQSNTSVLSQLAATGDAKRVFSHCL----DNVKGGGIFAVGVVDSPKVKTTPMVPN---QMHYNVMLMGMDVDGTSL-DLPRSIVR-----NGGTIVDSGTTLAYFPKVLYDSLIETILA 325          
BLAST of DY258752 vs. ExPASy Swiss-Prot
Match: NEP2_NEPDI (Aspartic proteinase nepenthesin-2 (Fragments) OS=Nepenthes distillatoria PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.358e-11
Identity = 36/89 (40.45%), Postives = 47/89 (52.81%), Query Frame = 3
Query:   84 DVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCG 350
            D++W QC PC +C+SQ         S SF+T+PC S  C+ L S  C+    C Y   YGDGS T G  + E     G+ V  +A GCG
Sbjct:   20 DLIWTQCEPCTQCFSQ--------DSSSFSTLPCESQYCQDLPSETCD----CQYTYGYGDGSSTQGYMAXED----GSSVPNIAFGCG 92          
The following BLAST results are available for this feature:
BLAST of DY258752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
NEP2_NEPGR1.884e-4839.24Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
NEP1_NEPGR3.007e-4638.41Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
ASPL2_ARATH1.008e-1727.34Aspartic proteinase-like protein 2 OS=Arabidopsis ... [more]
NEP2_NEPDI5.358e-1140.45Aspartic proteinase nepenthesin-2 (Fragments) OS=N... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3BC06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258752 ID=DY258752; Name=DY258752; organism=Citrus clementina; type=EST; length=1257bp
CACAAGGCAGCGGCGAGTACTTCACGCGCCTCGGAGTTGGCACACCCCCT
AGGTATGTCTACATGGTCTTAGACACCGGTAGCGACGTCGTTTGGATACA
GTGCGCTCCGTGCAAGAAATGCTACTCTCAAACCGACCCTGTCTTCGACC
CTGCCAAGTCCCGCTCGTTTGCTACCGTACCCTGTCGGTCCCCTTTGTGC
CGCAAGCTCGACTCTTCTGGCTGTAACCGCAGGAACACGTGTCTTTACCA
AGTCTCCTACGGAGACGGTTCTATCACCGTCGGTGATTTTTCCACTGAAA
CGCTGACGTTTCGTGGCACCAGAGTTGCGCGCGTGGCCCTCGGTTGTGGA
CACGACAATGAGGGCCTCTTCGTTGCTGCTGCGGGCTTATTGGGGCTCGG
TCGTGGGAGGTTGTCATTTCCAACTCAAACCGGTCGCCGGTTCAACCGTA
AGTTTTCTTACTGTTTAGTGGACCGATCCACTTCTGCTAAACCTTCATCG
ATGGTATTCGGTGACTCGGCCGTTTCACGAACCGCCCGGTTCACTCCGTT
ACTCGCAAACCCTAAGCTCGACACATTCTACTATGTTGAACTAGTTGGAA
TCAGCGTCGGCGGTGCTCATGTCCGCGGCATCACTGCTTCTTTGTTCAAA
CTCGATCCGGCCGGTAACGGTGGGGTCATCATAGACTCGGGTACGTCCGT
GACCCGTTTGACCCGACCCGCTTACATCGCATTGCGTGATGCTTTCCGAG
CTGGAGCATCCTCCTTGAAGCGTGCGCCAGACTTTTCGCTGTTTGATACG
TGCTTCCATTTGTCGGGAAAGACCGAAGTGAAGGTGCCCACCGTGGTGTT
GCTTTTCAAAAGTGCAAAATGGTTCTTTGCCCGCCACTAATTATCTAATA
CCCCGTGGAAAGTAACGGAAACATTTTGGGTTTGCATTTGGCGGGAACCC
TGGAGCGGGGTTTGTCGATAATTGGGAAAATTTTCAACAACAAGGGGCTT
CCCGGGGTTGTTTTATTATTTGGCCCCCCTTCACGGAATCCGGGTTTGCC
TCCCCCGCGGGGGGGGCGCCTTTGGGGGTTTGTCTTTTTGCCGGGGGGGG
GGTGTAATTTTTATAAAGGGGAAAAAAAACCTCTCTTTTTTTTCCCCGTT
TTAAATTAAATTCTTTGGCCTCCCCTCTGGCCCGGGGTTTTTTTTTTTTT
TTTTTTATTTTTTTATGTTTTTTCTTTTTTTTTTTTTTTTTTTTGGTTGG
GGGGGGA
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