DY258758

Overview
NameDY258758
Unique NameDY258758
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1152
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1228 contig Ccv1_Contig1228:1..1152. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: ILL3_ARATH (IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsis thaliana GN=ILL3 PE=2 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 4.827e-96
Identity = 174/233 (74.68%), Postives = 199/233 (85.41%), Query Frame = 1
Query:   82 DEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            D+   NQ +  A  DK+WLVSVRRQIHENPELLFE H TSALIRRELD+LG+ Y+YPVAKTGIVAQIGSG  PVVALRADMDALPLQELVEW+HKSKIDGKMHACGHD HTTMLLGAAKLL +RK  L GTVR+LFQPAEEGGAGAFHMIKEGALGDSEAIFGMH+  G+PTG +A+ISGP LA+TS+F+V++ G+   ++  +S +DP+L ASS ILALQ +ISRE DPL S
Sbjct:   23 DQEYPNQYLTEALGDKEWLVSVRRQIHENPELLFELHKTSALIRRELDELGVSYSYPVAKTGIVAQIGSGYPPVVALRADMDALPLQELVEWDHKSKIDGKMHACGHDSHTTMLLGAAKLLSKRKRMLNGTVRLLFQPAEEGGAGAFHMIKEGALGDSEAIFGMHVHTGLPTGELATISGPALASTSIFSVRMSGKSPASSETYSCVDPVLAASSTILALQLIISREVDPLLS 255          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: ILL5_ORYSJ (IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sativa subsp. japonica GN=ILL5 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 8.272e-80
Identity = 146/222 (65.77%), Postives = 180/222 (81.08%), Query Frame = 1
Query:  115 AQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            A++++DW+V VRR+IH +PEL F EH+TSAL+R EL++LG+  A  VA TG+VA +GSG  PVVALRADMDALP+QELVEWEHKSK+DG MHACGHDVHT MLLGAAKLL +RK++++GTVR+LFQPAEEGGAGA +MIK+G L   EAIFGMH+D  +PTG IA+ +GP  AA   +  K+EG+ G A  PH  +DPI+ AS VIL+LQQLISRE DPL S
Sbjct:   30 AEEERDWMVGVRRRIHAHPELAFREHHTSALVRDELERLGLT-ARAVAGTGVVADVGSGLPPVVALRADMDALPVQELVEWEHKSKVDGVMHACGHDVHTAMLLGAAKLLSERKEQIKGTVRLLFQPAEEGGAGASYMIKDGVLDGVEAIFGMHVDYRMPTGVIAAHAGPTQAAVCFYEAKIEGKTGKAETPHLNVDPIVAASFVILSLQQLISREDDPLHS 250          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSJ (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 5.549e-76
Identity = 134/216 (62.04%), Postives = 170/216 (78.70%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            W+V +RR+IHENPEL +EE  TS L+RRELD LGIPY +P A TG+VA +G+G  P VALRADMDALP+QE VEWEHKSK+ GKMH CGHD H  MLLG+A++L + +D+L+GTV ++FQPAEEGG GA  MI +GA+ + EAIFG+H+   +P G +AS  GP +A +  F   + G+GGHAA+PH TIDPIL AS+VI++LQQL+SREADPL S
Sbjct:   48 WMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKGTVVLVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDS 263          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.614e-75
Identity = 133/216 (61.57%), Postives = 169/216 (78.24%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            W+V +RR+IHENPEL +EE  TS L+RRELD LGIPY +P A TG+VA +G+G  P VALRADMDALP+QE VEWEHKSK+ GKMH CGHD H  MLLG+A++L + +D+L+GTV ++FQPAEEGG GA  MI +G + + EAIFG+H+   +P G +AS  GP +A +  F   + G+GGHAA+PH TIDPIL AS+VI++LQQL+SREADPL S
Sbjct:   48 WMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKGTVVLVFQPAEEGGGGAKKMIDDGTVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDS 263          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: ILL9_ORYSJ (IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sativa subsp. japonica GN=ILL9 PE=2 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 2.109e-75
Identity = 132/219 (60.27%), Postives = 172/219 (78.54%), Query Frame = 1
Query:  130 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI---GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            +WL  VRR+IH +PEL FEE  TS L+R ELD +G+PY +PVA+TG+VA I   G G  PVVALRADMDALP+QELV+WEHKS+ +GKMHACGHD HT MLLGAAKLL +RK++L+GTV+++FQPAEEG AGA+++++EG L D  A+FGMH+D  +P G +A+  GP  A +  F   + G+GGHAA PH  IDP++ AS+ IL+LQQ+++RE DPLQ
Sbjct:   50 EWLRGVRRRIHRHPELAFEEVRTSELVRAELDAIGVPYQWPVARTGVVATIAGGGGGDGPVVALRADMDALPVQELVDWEHKSQENGKMHACGHDAHTAMLLGAAKLLQKRKNELKGTVKLVFQPAEEGSAGAYYVLQEGVLDDVSAMFGMHVDPALPVGVVAARPGPFAATSGRFLATITGKGGHAAFPHDAIDPVVAASNAILSLQQIVAREIDPLQ 268          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: ILL4_ARATH (IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2)

HSP 1 Score: 281.567 bits (719), Expect = 6.135e-75
Identity = 131/217 (60.37%), Postives = 169/217 (77.88%), Query Frame = 1
Query:  130 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            DW+V +RR+IHENPEL +EE  TS L+R EL+K+G+ Y YPVA TG+V  +G+G  P VALRADMDAL +QE+VEWEHKSK+ GKMHACGHD HTTMLLGAAKLL + +++L+GTV ++FQPAEEGG GA  +++ G L +  AIFG+H+   +  G ++S  GP LA +  F  K+ G+GGHAA+P  TIDPIL AS+VI++LQ L+SREADPL S
Sbjct:   46 DWMVGIRRRIHENPELGYEEVETSKLVRAELEKMGVSYKYPVAVTGVVGYVGTGHAPFVALRADMDALAMQEMVEWEHKSKVPGKMHACGHDAHTTMLLGAAKLLKEHEEELQGTVVLVFQPAEEGGGGAKKIVEAGVLENVSAIFGLHVTNQLALGQVSSREGPMLAGSGFFKAKISGKGGHAALPQHTIDPILAASNVIVSLQHLVSREADPLDS 262          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 1.785e-74
Identity = 136/217 (62.67%), Postives = 167/217 (76.96%), Query Frame = 1
Query:  130 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            DW+V +RR+IHENPEL +EE  TS LIR EL+ +GI Y YPVA TG++  IG+G  P VALRADMDALP+QE VEWEHKSKI GKMHACGHD H TMLLGAAK+LH+ +  L+GTV ++FQPAEEG +GA  M +EGAL + EAIFG+H+   IP G  AS +G  LA   VF   + G+GGHAA+P  TIDP++ ASS++L+LQQL+SRE DPL S
Sbjct:   49 DWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDS 265          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: ILL7_ORYSJ (IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica GN=ILL7 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 8.859e-74
Identity = 134/220 (60.91%), Postives = 171/220 (77.73%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI----GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            WL  +RR IH +PEL FEE  TS L+R ELD +G+PY +PVA+TG+VA I    G+G+  V ALRADMDALPLQELV+WEHKS+  GKMHACGHD HTTMLLGAAKLL  +KD L+GTV+++FQPAEEG AGA ++++EG L D  AIFG+H+D  I  G++ S  GP LAA+  F   + G+GGHAA PH+ +DPILTASS I++LQQ+++RE DPL++
Sbjct:   65 WLRGLRRSIHRHPELAFEEVRTSELVRAELDAIGVPYEWPVARTGVVATIAGGDGAGAGTVFALRADMDALPLQELVDWEHKSEESGKMHACGHDAHTTMLLGAAKLLQSQKDDLKGTVKLVFQPAEEGYAGARYVLQEGVLDDVSAIFGLHVDPRIQVGTVTSRPGPFLAASGRFLATITGKGGHAAGPHNAVDPILTASSAIVSLQQIVARETDPLEA 284          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: ILL8_ORYSJ (IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sativa subsp. japonica GN=ILL8 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 1.511e-73
Identity = 128/218 (58.72%), Postives = 169/218 (77.52%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI--GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQS 780
            WL  +RR+IH+ PEL F+E  TS L+R ELD +G+PYA+PVA+TG+VA I  G+G+ PVVALRADMDALPLQELV+WE KS+  GKMHACGHD H TMLLGAAKLL  RKD+L+GT++++FQPAEEG AGA+H+++ G L D   IFG+H+   +P G +AS  GP ++A + F     G+GGHA +PH  +DP++  SS +L+LQQL+SRE DPL++
Sbjct:   56 WLSGLRRRIHQRPELAFQEVRTSELVRAELDAIGVPYAWPVARTGVVATIDGGAGAGPVVALRADMDALPLQELVDWEFKSQEKGKMHACGHDAHVTMLLGAAKLLQSRKDELKGTIKLVFQPAEEGHAGAYHVLESGLLDDVSVIFGLHVIPNLPVGVVASRPGPFMSAAARFAATFTGKGGHAGVPHDAVDPVVAVSSAVLSLQQLVSRETDPLEA 273          
BLAST of DY258758 vs. ExPASy Swiss-Prot
Match: ILL3_ORYSJ (IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sativa subsp. japonica GN=ILL3 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 1.511e-73
Identity = 127/217 (58.53%), Postives = 166/217 (76.50%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI--GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQ 777
            WL  +RR+IH++PEL F+EH TSAL+R ELD LG+ Y +PVA+TG+VA +   +G  PV  LRADMDALP+QE+VEWE KS  DGKMHACGHDVH  MLLGAAKLL  R+D   G V+++FQPAEEG AG +++++EGA+ D + IFGMH+D G+P G +AS  GP LA ++ F   + G+GGHAA PH  +DPI+  SS +L+LQQ+++RE DPLQ
Sbjct:   25 WLRGLRRRIHQHPELAFQEHRTSALVRAELDALGVAYVWPVAQTGVVATVVGAAGPGPVFGLRADMDALPIQEMVEWEFKSLEDGKMHACGHDVHVAMLLGAAKLLQSRRDHFNGKVKLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATINGKGGHAAAPHHAVDPIVAVSSAVLSLQQIVARETDPLQ 241          
The following BLAST results are available for this feature:
BLAST of DY258758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
ILL3_ARATH4.827e-9674.68IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsi... [more]
ILL5_ORYSJ8.272e-8065.77IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sati... [more]
ILL1_ORYSJ5.549e-7662.04IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ORYSI1.614e-7561.57IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL9_ORYSJ2.109e-7560.27IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sati... [more]
ILL4_ARATH6.135e-7560.37IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsi... [more]
ILL2_ARATH1.785e-7462.67IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL7_ORYSJ8.859e-7460.91IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sati... [more]
ILL8_ORYSJ1.511e-7358.72IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sati... [more]
ILL3_ORYSJ1.511e-7358.53IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sati... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI3BC12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258758 ID=DY258758; Name=DY258758; organism=Citrus clementina; type=EST; length=1152bp
CAACGGATTGTCTTTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGAATGTCTCAATCTCCT
TTTAATCATTTAATTCGAAAACCTGTGGAACTTTTGCCATTGAAAGCCAT
GAAGAATTCTCCATTTCCCCTTCTTAATAATTTTTACTGGGAATTTTAAC
TGGCTGAATGAATTGGCAAAAAAAAACTTGGAAGTGGAAATATTCATTGT
GGGAACTTAATAATTAATTTGGTCTTTGGGCTGAAAGGGGGTGGTCTGGT
TAATTTTTTGTTAAAAGGGGGGAAACCGCAATTTTAAATAAAATTTCCCC
CCGTTTTGGTTGAAATTTTGGGAGGCCCTTTTTGGGGGGGAGCCTTTAAA
AACGGGGAGGGGGTTTGTGATTCAAACCTCCCCAAAAAAAAGGGTGGAGA
AG
back to top