DY258910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258910 vs. ExPASy Swiss-Prot
Match: AP1B1_RAT (AP-1 complex subunit beta-1 OS=Rattus norvegicus GN=Ap1b1 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 6.020e-29 Identity = 80/209 (38.28%), Postives = 112/209 (53.59%), Query Frame = 1 Query: 175 QGLQISAELTRQDGQVFYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQV-PQLQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEV---LKDLPGVVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIENPGVKCAIKTPNPDIA 789 +GL+IS TRQ G + + N + F IQFN+N+FGLA LQV L P + LP+ ++ P + LQVAVKNN V+YF+ LHVLF EDG+M+R FL TW+ +P+ NE ++D P N EA L +SN+F +AKR QD+ Y S K+ G+ L EL NP ++K P+++ Sbjct: 733 KGLEISGTFTRQVGSISMDLQLTNKALQVMTDFAIQFNRNSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEPLNNLQVAVKNNID-VFYFSTLYPLHVLFVEDGKMDRQMFLATWKDIPNENEAQFQIRDCP----LNTEAASSKLQSSNIFTVAKRTVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFTLSLKCRAPEVS 936
BLAST of DY258910 vs. ExPASy Swiss-Prot
Match: AP1B1_MOUSE (AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1b1 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.902e-28 Identity = 79/209 (37.80%), Postives = 112/209 (53.59%), Query Frame = 1 Query: 175 QGLQISAELTRQDGQVFYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQVP-QLQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEV---LKDLPGVVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIENPGVKCAIKTPNPDIA 789 +GL+IS TRQ G + + N + F IQFN+N+FGLA LQV L P + LP+ ++ P + LQVAVKNN V+YF+ LHVLF EDG+M+R FL TW+ + + NE ++D P N EA + L +SN+F +AKR QD+ Y S K+ G+ L EL NP ++K P+++ Sbjct: 727 KGLEISGTFTRQAGSISMDLQLTNKALQVMTDFAIQFNRNSFGLAPAAPLQVHVPLSPNQTVEISLPLNTVGSVLKMEPLNNLQVAVKNNID-VFYFSTLYPLHVLFVEDGKMDRQMFLATWKDIANENEAQFQIRDCP----LNTEAASNKLQSSNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFTLSLKCRAPEVS 930
BLAST of DY258910 vs. ExPASy Swiss-Prot
Match: AP1B1_HUMAN (AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1B1 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 6.656e-28 Identity = 79/212 (37.26%), Postives = 114/212 (53.77%), Query Frame = 1 Query: 175 QGLQISAELTRQDGQVFYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQV-PQLQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEV---LKDLPGVVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIENPG---VKCAIKTPNPDIA 789 +GL+IS TRQ G + + N + F IQFN+N+FGLA LQV L P + LP+ ++ P + LQVAVKNN V+YF+ LH+LF EDG+M+R FL TW+ +P+ NE ++D P N EA L +SN+F +AKR QD+ Y S K+ G+ L EL NP ++ ++K P+++ Sbjct: 730 KGLEISGTFTRQVGSISMDLQLTNKALQVMTDFAIQFNRNSFGLAPAAPLQVHAPLSPNQTVEISLPLSTVGSVMKMEPLNNLQVAVKNNID-VFYFSTLYPLHILFVEDGKMDRQMFLATWKDIPNENEAQFQIRDCP----LNAEAASSKLQSSNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSCTDLELSLKCRAPEVS 936
BLAST of DY258910 vs. ExPASy Swiss-Prot
Match: AP2B1_RAT (AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.063e-25 Identity = 74/206 (35.92%), Postives = 108/206 (52.43%), Query Frame = 1 Query: 175 QGLQISAELTRQDGQVFYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQV-PQLQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIENPGVKCAIKTPNPDIA 789 +GL+IS T + G ++ M F N + F IQFNKN+FG+ L + L P S LP+ + P + LQVAVKNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ + + N + L +N++ IAKR QD+ Y S K+ G+ L EL NP ++K P+++ Sbjct: 721 KGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHL-NADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVS 924
BLAST of DY258910 vs. ExPASy Swiss-Prot
Match: AP2B1_MOUSE (AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.063e-25 Identity = 74/206 (35.92%), Postives = 108/206 (52.43%), Query Frame = 1 Query: 175 QGLQISAELTRQDGQVFYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQV-PQLQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIENPGVKCAIKTPNPDIA 789 +GL+IS T + G ++ M F N + F IQFNKN+FG+ L + L P S LP+ + P + LQVAVKNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ + + N + L +N++ IAKR QD+ Y S K+ G+ L EL NP ++K P+++ Sbjct: 721 KGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHL-NADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVS 924
BLAST of DY258910 vs. ExPASy Swiss-Prot
Match: AP2B1_HUMAN (AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.063e-25 Identity = 74/206 (35.92%), Postives = 108/206 (52.43%), Query Frame = 1 Query: 175 QGLQISAELTRQDGQVFYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQV-PQLQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIENPGVKCAIKTPNPDIA 789 +GL+IS T + G ++ M F N + F IQFNKN+FG+ L + L P S LP+ + P + LQVAVKNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ + + N + L +N++ IAKR QD+ Y S K+ G+ L EL NP ++K P+++ Sbjct: 721 KGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHL-NADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVS 924
BLAST of DY258910 vs. ExPASy Swiss-Prot
Match: AP2B1_BOVIN (AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 1.063e-25 Identity = 74/206 (35.92%), Postives = 108/206 (52.43%), Query Frame = 1 Query: 175 QGLQISAELTRQDGQVFYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQV-PQLQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIENPGVKCAIKTPNPDIA 789 +GL+IS T + G ++ M F N + F IQFNKN+FG+ L + L P S LP+ + P + LQVAVKNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ + + N + L +N++ IAKR QD+ Y S K+ G+ L EL NP ++K P+++ Sbjct: 721 KGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHL-NADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVS 924
BLAST of DY258910 vs. ExPASy Swiss-Prot
Match: AP1B1_BOVIN (AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.063e-25 Identity = 74/206 (35.92%), Postives = 108/206 (52.43%), Query Frame = 1 Query: 175 QGLQISAELTRQDGQVFYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQV-PQLQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIENPGVKCAIKTPNPDIA 789 +GL+IS T + G ++ M F N + F IQFNKN+FG+ L + L P S LP+ + P + LQVAVKNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ + + N + L +N++ IAKR QD+ Y S K+ G+ L EL NP ++K P+++ Sbjct: 735 KGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHL-NADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVS 938
BLAST of DY258910 vs. ExPASy Swiss-Prot
Match: AP1B_DICDI (AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.293e-20 Identity = 70/214 (32.71%), Postives = 111/214 (51.87%), Query Frame = 1 Query: 175 QGLQISAELTRQDGQVFYSMLFENNTQTPLDGFMIQFNKNTFGLA-AGGALQVPQLQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAVKN-NQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNE----VLKDLPGVVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIENPGVKCAIKTPNPDIAPLF 798 Q +QIS TR G++ + N +Q + F IQF +N+FG++ A L ++ G S +P+ +S P + ++ +A+ Q +YF L L TE GR++R S+L W+S+P+SNE + LP V +V++ L L + N+F I ++K NQ++ + S K V LIEL I +C+ KT +PDI LF Sbjct: 721 QAIQISGAFTRFQGRINLELNLLNTSQQGMSKFKIQFYQNSFGISPADQILSCGAIEVGQSTDVTIPISCNGQIS-NPLNPVIDMAMMVLPSQERFYFKMNFPLLCLLTETGRLDRESYLSMWKSIPESNERSVEIQVRLPHV---DVDSILRRLNSKNIFEIVRKKAPNQEISFLSCKTESSVYILIELAFNISTNTCRCSSKTTSPDIMALF 930 The following BLAST results are available for this feature:
BLAST of DY258910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258910 ID=DY258910; Name=DY258910; organism=Citrus clementina; type=EST; length=1072bpback to top |