DY259811

Overview
NameDY259811
Unique NameDY259811
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1045
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14794 contig Ccv1_Contig14794:2..1046. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY259811 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 5.914e-58
Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 3 
Query:   69 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 419
            MA+SSFKLEHPLERRQAE+ RIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN LPPTAA+MSAIYEENKDEDGFLYMTYSGENTFG
Sbjct:    1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of DY259811 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 5.914e-58
Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 3 
Query:   69 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 419
            MA+SSFKLEHPLERRQAE+ RIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN LPPTAA+MSAIYEENKDEDGFLYMTYSGENTFG
Sbjct:    1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of DY259811 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.115e-56
Identity = 108/117 (92.31%), Postives = 114/117 (97.44%), Query Frame = 3 
Query:   69 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 419
            MA SSFKLEHPLERRQ ES+RIREKYPDRIPVIVE+AERSD+P+IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIF+FVKN LPPTAAMMSAIY+ENKDEDGFLYMTYSGENTFG
Sbjct:    1 MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of DY259811 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.611e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 3 
Query:   69 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 419
            MAKSSFKL+H LERRQAE+ RIREKY DRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKN LPPTAA+MSAIYEENKDEDGFLYMTYSGENTFG
Sbjct:    1 MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of DY259811 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.611e-55
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 3 
Query:   69 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 419
            MAKSSFKL+H LERRQAE+ RIREKY DRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKN LPPTAA+MSAIYEENKDEDGFLYMTYSGENTFG
Sbjct:    1 MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of DY259811 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.747e-55
Identity = 104/119 (87.39%), Postives = 116/119 (97.48%), Query Frame = 3 
Query:   69 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAS 425
            MA++SFKLEHPLERRQAESARIREKY DRIPVIVEKA+++D+P+IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIF+FVKN LPPTA++MSAIYEENKDEDGFLYMTYSGENTFG++
Sbjct:    1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA 119
[Close]
BLAST of DY259811 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.747e-55
Identity = 104/119 (87.39%), Postives = 116/119 (97.48%), Query Frame = 3 
Query:   69 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAS 425
            MA++SFKLEHPLERRQAESARIREKY DRIPVIVEKA+++D+P+IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIF+FVKN LPPTA++MSAIYEENKDEDGFLYMTYSGENTFG++
Sbjct:    1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA 119
[Close]
BLAST of DY259811 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 6.120e-55
Identity = 106/120 (88.33%), Postives = 115/120 (95.83%), Query Frame = 3 
Query:   69 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGASF 428
            MA SSFK EHPLE+RQAE+ARIREKYPDRIPVIVE+AE+SD+PDID+KKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKNILPPTAA+MSAIYEE+KDEDGFLYM+YSGENTFG  F
Sbjct:    1 MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGIFF 120
[Close]
BLAST of DY259811 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 2.571e-53
Identity = 102/118 (86.44%), Postives = 112/118 (94.92%), Query Frame = 3 
Query:   69 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGA 422
            MAKSSFK+ +PLE R +ES+RIREKYPDRIPVIVEKA +SD+PDIDKKKYLVPADLTVGQFVYVVRKRIKL AEKAIF+FVKN LPPTAA+MSAIYEE+KDEDGFLYMTYSGENTFG+
Sbjct:    1 MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118
[Close]
BLAST of DY259811 vs. ExPASy Swiss-Prot
Match: ATG8B_ARATH (Autophagy-related protein 8b OS=Arabidopsis thaliana GN=ATG8B PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.667e-52
Identity = 100/120 (83.33%), Postives = 110/120 (91.67%), Query Frame = 3 
Query:   69 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGASF 428
            M K+SFKL +PLE R AES RIR KYP+R+PVIVEKA +SD+PDIDKKKYLVPADLT+GQFVYVVRKRIKL AEKAIF+FVKN LPPTAA+MSAIYEE+KDEDGFLYMTYSGENTFG SF
Sbjct:    1 MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGSF 120
The following BLAST results are available for this feature:
BLAST of DY259811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8C_ORYSJ5.914e-5895.73Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ORYSI5.914e-5895.73Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ARATH1.115e-5692.31Autophagy-related protein 8c OS=Arabidopsis thalia... [more]
ATG8B_ORYSJ1.611e-5593.16Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8B_ORYSI1.611e-5593.16Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8A_ORYSJ2.747e-5587.39Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8A_ORYSI2.747e-5587.39Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8D_ARATH6.120e-5588.33Autophagy-related protein 8d OS=Arabidopsis thalia... [more]
ATG8A_ARATH2.571e-5386.44Autophagy-related protein 8a OS=Arabidopsis thalia... [more]
ATG8B_ARATH1.667e-5283.33Autophagy-related protein 8b OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YE08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259811 ID=DY259811; Name=DY259811; organism=Citrus clementina; type=EST; length=1045bp
TGATTAATATATTTATTCCAATCAAGATCTTACCTCCTCAGAAGCAGTAG
AAAGAACAAGGAGAAGCTATGGCCAAGAGCTCCTTCAAGCTTGAACACCC
ACTCGAAAGGAGGCAGGCTGAATCTGCCCGTATCAGGGAGAAGTATCCTG
ATAGAATACCAGTGATTGTGGAGAAGGCTGAAAGGAGTGACATACCTGAT
ATTGACAAAAAAAAATACCTGGTTCCTGCTGATCTGACTGTTGGACAATT
TGTTTATGTGGTCCGGAAGAGGATAAAGCTCAGTGCTGAGAAGGCCATAT
TCATATTTGTCAAGAACATTTTGCCACCCACTGCTGCAATGATGTCTGCA
ATTTATGAGGAAAACAAAGATGAGGATGGCTTCCTTTACATGACTTACAG
TGGGGAGAACACATTCGGGGCATCTTTCTAAGGGAATCAACTGAACTTCT
GTAGATTAACTCTGAAAAGACTTGATGGAAATATGTAAATCCTTTGCTAT
TTGCTTTCAACTGAGGGAGCACTTGGAAAGCATGATCTTCCTGGACGCAG
CCCCTTCTTAAAGTTTGGATCTATTGTTACTCCTCTTTATCTTATTTGTT
GCAGTAAATATTCGTGATTTCCTATTGGATGAGCCAGTTAATACAGGTAC
TGTTGGATTTAACTAAATGCCGGAGACAAGTTCCCTTTACAACTGCTCAT
TGCAACCCAAATGAGAATCCTTTAATATAATAATGTTTAAAAAAAAAAAA
AAAAAAAAAAACCCCCCTTTCTTGAACAAGTTTGGCTTAAAAAAAAGCTT
GCTATTTATTTTGGTTGCACCAACCGGGTCACTTCCGGGCAAAAAAAAAT
CATTTTTTTGGCCCCCCGCCGAATCCCCCCAAAGTAGGTTGATTTACTTG
GGCTATCCTGTTTCCCGGGATCTCTGGGCCCCTGGCCCCAAACCCCTTAT
TGTTCTTTTGCTGCCCTTTAAAATCTTTTCTCTCTCATTTCTAAACCTCC
TCCGTGGCCTTTACGCACCTCGGCTAATTTTTCCCTCCACGACAA
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