DY259817

Overview
NameDY259817
Unique NameDY259817
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1060
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: SIR_SYNY3 (Sulfite reductase [ferredoxin] OS=Synechocystis sp. (strain PCC 6803) GN=sir PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 5.515e-43
Identity = 99/218 (45.41%), Postives = 130/218 (59.63%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPNVNESATQLIKFHGSYQQYNRDER---GAKSYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRK-DYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*DGEPP*SG*RNVMKILMETNFPGFSWAPLRGIPSWPRKFQFSLT 904
            IKE+SN++R PL  ELL DA    + A Q++KFHGSYQQ NRD R     K Y FMLRT+NP G +  QLY  +DDL+   G              HG++KKDLK  + +++ ++GSTLGACGD+NRNV+AP AP   K +Y +A   A  +A  L+PQSG YYE+W+DGE++  GE          K L  TN       P+ G    PRKF+ S+T
Sbjct:   18 IKERSNYLREPLATELLNDANYFTDDAVQILKFHGSYQQDNRDNRVKGQEKDYQFMLRTRNPGGLIPAQLYTALDDLSKTHGNQTLRVTTRQGLQIHGIVKKDLKMAIATVVNNLGSTLGACGDINRNVMAPAAPFRDKPEYGYAWDYANKVADLLSPQSGAYYEIWLDGEKVISGEEAPEVKAARQKDLNGTNL-NDPKEPIYGQQFMPRKFKISVT 234          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: SIR_SYNE7 (Sulfite reductase [ferredoxin] OS=Synechococcus elongatus (strain PCC 7942) GN=sir PE=3 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 7.202e-43
Identity = 86/178 (48.31%), Postives = 120/178 (67.42%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPNVNESATQLIKFHGSYQQYNRDER---GAKSYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPL-VRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*DGEP 784
            +K +S ++  P+  +L  ++ + NE   Q++KFHGSYQQ NRD R     K + FMLR ++P G +  QLYLT+D LAD +G G            HG+LK+DLKTV+R I+ ++GST+ ACGD+NRNV+APPAP   R +Y +A+  A NIA  LTP+SG YYE+W+DGE++  GEP
Sbjct:   16 LKARSQYLLEPILSQLQEESTHFNEDGIQILKFHGSYQQDNRDNRVKGQEKDFQFMLRLRSPGGYIPPQLYLTLDQLADDYGNGTLRATTRQAFQLHGILKRDLKTVIRRIVENLGSTISACGDVNRNVMAPPAPFRDRPEYEWARTYANNIADLLTPESGAYYELWLDGEKVLSGEP 193          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_STAHJ (Sulfite reductase [NADPH] hemoprotein beta-component OS=Staphylococcus haemolyticus (strain JCSC1435) GN=cysI PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.155e-24
Identity = 63/181 (34.81%), Postives = 104/181 (57.46%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEEL---LTDAPNVNESATQLIKFHGSYQQYNRDERGAK-------SYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*D 775
            +K++SN++R  + + L   LT A  +++  T+L+KFHGSYQQ +RD R  +       +YSFM+R + P G  + + +L MDD+++ +               HG+LK++LKT M+ I  S+  T+ ACGD+NRN +  P P     +      A  I+  L P++  Y+E+W+DGE++ D
Sbjct:   22 LKDESNYLRGTIEQGLADPLTGA--ISDDDTKLLKFHGSYQQDDRDLRDERRKQKLEPAYSFMIRVRLPGGTATPEQWLAMDDISNNYANQTLKLTTRQTFQFHGILKRNLKTSMKKINESVLDTIAACGDVNRNTMCNPNPYQSHIHKEINNYATKISDHLLPKTNAYHEIWLDGEKVLD 200          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_STAS1 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=cysI PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 4.390e-24
Identity = 62/179 (34.64%), Postives = 101/179 (56.42%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPN-VNESATQLIKFHGSYQQYNRDERGAK-------SYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*D 775
            IK  S+++R  + + L       + E  T+L+KFHGSY Q +RD R  +       +YSFM+R + P G  + + ++ MDD+A+ +  G            HG+LK++LK  M+ I +S+  TL ACGD+NRNV+  P P     +    + A  I+  L+P++  Y+E+W+DGE++ D
Sbjct:   18 IKAHSDYLRGSIVQGLADRVTGAIAEEDTKLLKFHGSYMQDDRDIRDERRRQKLEPAYSFMIRVRAPGGASTAEQWIAMDDIANTYANGTIKLTTRQAFQFHGILKRNLKQTMKDINQSLLDTLAACGDVNRNVMCNPNPYQSDVHSEINQIASAISRHLSPKTQAYHEIWLDGEKVLD 196          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_ANOFW (Sulfite reductase [NADPH] hemoprotein beta-component OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=cysI PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 7.488e-24
Identity = 69/221 (31.22%), Postives = 111/221 (50.23%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTD-APNVNESATQLIKFHGSYQQYNRDERGAK-------SYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*DGEPP*SG*RNVMKILMETNFPGFSWAPLRGIPSWPRKFQFSL 901
            IK++SN++R  L E +       + E   +L+KFHGSY Q +RD R  +       +Y FM+R + P G  + + +L MD+LA ++  G            HGVLK ++K  +++I  ++ +TL ACGD+NRNV+  P P   + +    + AK ++  L PQ+  YYE+W+D E++ D                    P     P+ G    PRKF+  +
Sbjct:   19 IKQESNYLRGTLKETMEDRITAGIPEDDNRLMKFHGSYLQDDRDLRAERQKQKLEPAYQFMIRVRTPGGVATPEQWLAMDELARKYANGTLKLTTRQAFQFHGVLKWNMKKTLQAINDALLTTLAACGDVNRNVMCNPNPYQSEVHAEVYEWAKRLSDHLLPQTRAYYEIWLDEEKVAD-------------------TPDVEQEPIYGALYLPRKFKIGI 220          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_PAESJ (Sulfite reductase [NADPH] hemoprotein beta-component OS=Paenibacillus sp. (strain JDR-2) GN=cysI PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.277e-23
Identity = 63/180 (35.00%), Postives = 99/180 (55.00%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTDAPN-VNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*DG 778
            +K +SN++R  L + L       + +   +L+KFHGSY Q +RD R  +        Y FMLR   P G  + + +L MD LAD++G G            HGVLK +LK  ++ I  +M STL ACGD++RNV+  P P   + +      ++ + + L P++  Y+E+W+DGE++ DG
Sbjct:   20 LKLESNYLRGSLTDSLANRITGGLPDLDNRLLKFHGSYMQDDRDYRNEREKQKLEPYYQFMLRVVTPGGVATPEQWLLMDSLADKYGTGSLKLTTRQAFQLHGVLKWNLKKTIQEINAAMLSTLAACGDVSRNVMCNPNPYQSELHSEVFHWSQQLTSHLAPKTPAYHEIWLDGEKVVDG 199          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_THIRO (Sulfite reductase [NADPH] hemoprotein beta-component OS=Thiocapsa roseopersicina GN=cysI PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.179e-23
Identity = 68/183 (37.16%), Postives = 98/183 (53.55%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEEL---LTDAPNVNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*DGE 781
            IK +SN +R  L E L   LT A  ++   TQ+ KFHG YQQ +RD R A+        + FMLR   P G  +   +L +D +  + G G            HG+LK+D+ +V+R I   M  ++G CGD+NRNVL  P P+    +      AK I+  L P++  Y+E+W+DGEQ+  GE
Sbjct:   11 IKARSNCLRGTLRESLADTLTGA--ISPEDTQISKFHGFYQQDHRDRRQARPEQYLEPYFGFMLRAPLPGGVCTPAQWLAIDGMGRELGGGSLRLTTRQSFQYHGILKRDIASVIRGINAVMIDSIGGCGDVNRNVLCNPNPVESALHREVYDWAKRISEHLLPRTRAYHEIWLDGEQVGGGE 191          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_BREBN (Sulfite reductase [NADPH] hemoprotein beta-component OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=cysI PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.179e-23
Identity = 64/179 (35.75%), Postives = 102/179 (56.98%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEELLTD-APNVNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*D 775
            IK +S+++R  L E L    + ++ E   +L+KFHGSY Q +RD R  +S       Y FM+R +   G V+ + +L MDD+A QF  G            HGV+K ++K V++ +  ++ STL ACGD+NRNV+  P P   + +    + AK I+  L P++  Y+E+W+D E++ D
Sbjct:   20 IKRKSDYLRGSLAETLEDRISGSIPEDDNRLMKFHGSYMQDDRDLRNERSKQKLEPAYQFMVRVRAAGGVVTPEQWLMMDDIAQQFANGTIRLTTRQSFQLHGVIKWNMKQVIQEVNEALLSTLAACGDVNRNVMCNPNPYESEVHQEVYEWAKKISNHLDPRTRAYHEIWLDEEKVVD 198          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_STACT (Sulfite reductase [NADPH] hemoprotein beta-component OS=Staphylococcus carnosus (strain TM300) GN=cysI PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.845e-23
Identity = 65/180 (36.11%), Postives = 101/180 (56.11%), Query Frame = 2
Query:  266 KEQSNFIRYPLNEEL---LTDAPNVNESATQLIKFHGSYQQYNRDERGAKS-------YSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*D 775
            K +SN++R  + E L   +T A  + E  T+L+KFHGSY Q +RD R  +        Y+FM+R + P GKVS   +L +D LAD +               HG+LK++LK  M+SI  ++  ++ ACGD+ RNV+  P P     Y    + A +I+  L P++  Y+E+W+DGE++ D
Sbjct:   19 KGESNYLRGTIVEGLNDPITGA--IAEDDTKLLKFHGSYMQDDRDLRQERRKQKLEPLYAFMIRVRIPGGKVSTDQWLKLDALADNYAGEQIRLTTRQTMQYHGILKRNLKKSMQSIHDAVLDSIAACGDVTRNVMCNPNPYQSDIYAEVNRAADSISEHLLPKTTAYHEIWLDGEKVVD 196          
BLAST of DY259817 vs. ExPASy Swiss-Prot
Match: CYSI_OCEIH (Sulfite reductase [NADPH] hemoprotein beta-component OS=Oceanobacillus iheyensis GN=cysI PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.854e-23
Identity = 61/181 (33.70%), Postives = 104/181 (57.46%), Query Frame = 2
Query:  263 IKEQSNFIRYPLNEEL---LTDAPNVNESATQLIKFHGSYQQYNRDERGAK-------SYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGXXXXXXXXXXXXHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAKNIAAPLTPQSGFYYEMWVDGEQI*D 775
            IKE+SNF+R  + E L   +T A  +++   +L+KFHGSYQQ +RD R  +       +Y FM+R + P G  + + +L MDDLA ++  G            HG++K DLK  M+ + +++ +T+ ACGD+NRNV+    P     +    + +K ++  L P++  Y+E+W++ ++I D
Sbjct:   19 IKERSNFLRGTIAEGLEDRITGA--ISDEDNKLLKFHGSYQQDDRDLRDERRRKKLEPAYQFMIRVRTPGGVTTPEQWLVMDDLAHKYANGSMRLTTRQTFQLHGIVKWDLKKTMQGMNQALMTTIAACGDINRNVMCNVNPEQSDVHAEVYEWSKKVSDHLLPETNAYHEIWLEDKKIVD 197          
The following BLAST results are available for this feature:
BLAST of DY259817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
SIR_SYNY35.515e-4345.41Sulfite reductase [ferredoxin] OS=Synechocystis sp... [more]
SIR_SYNE77.202e-4348.31Sulfite reductase [ferredoxin] OS=Synechococcus el... [more]
CYSI_STAHJ1.155e-2434.81Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_STAS14.390e-2434.64Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_ANOFW7.488e-2431.22Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_PAESJ1.277e-2335.00Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_THIRO2.179e-2337.16Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_BREBN2.179e-2335.75Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_STACT2.845e-2336.11Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_OCEIH4.854e-2333.70Sulfite reductase [NADPH] hemoprotein beta-compone... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YE15FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259817 ID=DY259817; Name=DY259817; organism=Citrus clementina; type=EST; length=1060bp
TTTGAAAACATTTGCTGTTGCGTTTGCGAGGGCTATGACGACGTCGTTTG
GAGCCGCCAACACCGTGATTCCGAACAATCCGAACATTCGGATTCGGAGC
TTTAACGGGTTGAAGCCTTCGCATTCGCTCTCTATCAGGACAAATCTGCG
CGCTTTTCCCGTTCCGTACGCCTCACGGAGTTCGGTCGTCAGAGCTGTGT
CCACGCCAGTAAAGCCGGAGACTGAGACCAAGACTGAGACTAAGCGAAGT
AAAGTGGAAATAATCAAAGAGCAAAGTAATTTCATAAGGTACCCTCTTAA
TGAGGAGTTGTTGACAGATGCCCCGAATGTAAATGAGTCTGCTACGCAGT
TAATAAAGTTTCATGGGAGCTACCAACAGTATAATAGAGATGAGCGTGGT
GCAAAATCGTACTCATTCATGCTTCGAACTAAGAATCCTTGCGGAAAAGT
CTCGAACCAACTGTACTTGACCATGGATGATCTTGCGGATCAGTTTGGTA
TCGGAACCCTTCGTCTGACTACCAGACAAACTTTTCAGCTCCATGGTGTC
TTGAAGAAGGACCTGAAGACAGTAATGAGAAGCATTATTAGAAGTATGGG
TTCAACTCTTGGTGCATGCGGTGATCTCAATAGGAATGTTCTTGCTCCTC
CTGCTCCTCTGGTGAGGAAAGATTACTTATTTGCACAGAAAACAGCAAAG
AACATTGCTGCTCCGCTCACGCCTCAGTCGGGTTTCTACTATGAAATGTG
GGTGGATGGGGAGCAAATTTAGGACGGCGAACCCCCCTGAAGTGGGTAAA
GGAACGTAATGAAAATTCTCATGGAAACCAATTTCCCCGGATTCTCCTGG
GCCCCTTTAAGGGGAATCCCTTCTTGGCCAAGGAAGTTTCAATTTTCGCT
AACCGGGGCCCAAAAAAAACCCCCGGGGGAAATTCTAACACAAAGAGAAT
ATGGGGGTGTCGGGGGTTCTCAAACAAACACGGGGGAACCCTCGGGAGAT
CCTCTCTTTTTTTGTGGGGGGGGGATAGGAGGAAAACTCTCTGGCTCTGG
CGCCACTCCC
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