DY260135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260135 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.811e-50 Identity = 90/109 (82.57%), Postives = 101/109 (92.66%), Query Frame = 1 Query: 1 VVPVPYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 327 +VPV YRRVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH+ +IKGSRT WQ MSRNWGQNWQSN+YLNGQ+LSF+VTTSDGRTV S+N APAGWS+G+T++G QFR Sbjct: 141 IVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQFR 249
BLAST of DY260135 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 8.988e-50 Identity = 90/109 (82.57%), Postives = 100/109 (91.74%), Query Frame = 1 Query: 1 VVPVPYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 327 +VPV YRRVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH+ +KGSRTGWQ MSRNWGQNWQSN+YLNGQSLSF+VTTSDG+T+ S NVA AGWSFG+T++GAQ R Sbjct: 142 IVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTGAQLR 250
BLAST of DY260135 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 1.695e-48 Identity = 88/109 (80.73%), Postives = 98/109 (89.91%), Query Frame = 1 Query: 1 VVPVPYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 327 VVPV YRRVPC RRGGIRFTINGHSYFNLVL+TNVGGAGDVH+V++KGSRT WQ MSRNWGQNWQSN LNGQ+LSF+VT SDGRTV S N+APA WSFG+T++G QFR Sbjct: 145 VVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQFR 253
BLAST of DY260135 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 2.448e-47 Identity = 85/108 (78.70%), Postives = 95/108 (87.96%), Query Frame = 1 Query: 1 VVPVPYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 324 +VPV YRRVPC ++GGIRFTINGHSYFNLVL+TNV G GDV +VSIKGS TGWQPMSRNWGQNWQSN+YL+GQSLSF+V SDGRTVTS NV PAGW FG+T+ G QF Sbjct: 144 IVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQF 251
BLAST of DY260135 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 4.175e-47 Identity = 87/109 (79.82%), Postives = 97/109 (88.99%), Query Frame = 1 Query: 1 VVPVPYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 327 ++PV YRRV C R GGIRFTINGHSYFNLVL+TNVGGAGDVH+VS+KGSRT WQ MSRNWGQNWQSN+YLNGQSLSF VTTSD R+V S+NVAP WSFG+TY+G QFR Sbjct: 146 IIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQFR 254
BLAST of DY260135 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 9.301e-47 Identity = 83/108 (76.85%), Postives = 96/108 (88.89%), Query Frame = 1 Query: 1 VVPVPYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 324 +VPV +RRVPC ++GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRTGWQPMSRNWGQNWQSN +L+GQSLSF+VT SDGRTVTS NVA GW FG+T+ G QF Sbjct: 139 IVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246
BLAST of DY260135 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 9.301e-47 Identity = 83/108 (76.85%), Postives = 96/108 (88.89%), Query Frame = 1 Query: 1 VVPVPYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 324 +VPV +RRVPC ++GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRTGWQPMSRNWGQNWQSN +L+GQSLSF+VT SDGRTVTS NVA GW FG+T+ G QF Sbjct: 139 IVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246
BLAST of DY260135 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.754e-45 Identity = 84/109 (77.06%), Postives = 97/109 (88.99%), Query Frame = 1 Query: 1 VVPVPYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 324 +VPV +RRVPC ++GGIRFTINGHSYFNLVLI+NVGGAGDVHAVSIKGS+T WQ MSRNWGQNWQSN+Y+N QSLSF+VTTSDGRT+ S +VAP+ W FG+TY G QF Sbjct: 145 IVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQF 253
BLAST of DY260135 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 7.370e-44 Identity = 84/109 (77.06%), Postives = 92/109 (84.40%), Query Frame = 1 Query: 1 VVPVPYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 327 VVPV YRRV C R+GGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ T WQ MSRNWGQNWQSN L+GQ+LSF+VTTSDGRTV S N P WSFG+TY+G QFR Sbjct: 144 VVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFR 252
BLAST of DY260135 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 7.370e-44 Identity = 82/108 (75.93%), Postives = 92/108 (85.19%), Query Frame = 1 Query: 1 VVPVPYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 324 VVPV YRRV C ++GGIRFTI GHSYFNLVL+TNVGGAGDV AVS+KGSR+GWQ MS NWG NWQ+ L+GQ LSF VT SDGRTVTS NVAP+GWSFG+T+SG QF Sbjct: 141 VVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQTFSGGQF 248 The following BLAST results are available for this feature:
BLAST of DY260135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260135 ID=DY260135; Name=DY260135; organism=Citrus clementina; type=EST; length=1160bpback to top |