DY260235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2M_BETVU (NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris GN=ND2 PE=3 SV=2) HSP 1 Score: 285.804 bits (730), Expect = 2.798e-76 Identity = 159/216 (73.61%), Postives = 172/216 (79.63%), Query Frame = 3 Query: 51 EGIPSLLIGIFIYALMTIDAFAIVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGPK--AVLRAPDT*FTQSVAT--RMGMHATKDRVESD---TSTVYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSPPIVETTQAGPGPGLDSER 677 EGI SLLIG+FIYA M FAIV ALRQTRVKYIA LG LAKTNPISAITFS+TMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLA VGVVTSVIGCWAAGRLPRVSQFG + +V R T+S+ R G ++ S +VYSISLYESTITTRDEPWFGE +LALGVIGLPVTA DRILRCSPP+V TT+A GPGL+SER Sbjct: 308 EGIQSLLIGLFIYASMDDRCFAIVSALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGCWAAGRLPRVSQFGDRRQFSVHR------TRSLPNQLRHGWECMLRKIGSSLIHQPSVYSISLYESTITTRDEPWFGEFELALGVIGLPVTAHDRILRCSPPVVGTTRA--GPGLNSER 515
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2M_ARATH (NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana GN=ND2 PE=2 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 1.071e-51 Identity = 106/130 (81.54%), Postives = 111/130 (85.38%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGPK 392 IGH YI GF CGTIEGI SLLIGIFIYALMT+DAFAIVLALRQTRVKYIA LG LAKTNPI AITFS+TMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLA VGVVTSVIGC+ RL + F P+ Sbjct: 324 IGHVGYICIGFSCGTIEGIQSLLIGIFIYALMTMDAFAIVLALRQTRVKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLALVGVVTSVIGCFYYIRLVKRMFFDTPR 453
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2M_OENBE (NADH-ubiquinone oxidoreductase chain 2 OS=Oenothera bertiana GN=ND2 PE=2 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 3.116e-51 Identity = 105/130 (80.77%), Postives = 111/130 (85.38%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGPK 392 IGH YI GF CGTIEGI SLLIG+FIYAL TI+AFAIVLALRQTRVKYIA LG LAKTNPI AITFS+TMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGC+ RL + F P+ Sbjct: 313 IGHVGYICIGFSCGTIEGIQSLLIGLFIYALTTINAFAIVLALRQTRVKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCFYYIRLVKRMFFDTPR 442
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NU2M_MARPO (NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia polymorpha GN=ND2 PE=3 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 1.225e-47 Identity = 96/130 (73.85%), Postives = 104/130 (80.00%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQTRVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGPK 392 IGH Y+ GF CGTIEGI SLLIGIFIY LMT++ FAIVLALRQ R KYIA LG LAKTNPI AIT S+TMFSYAGIPPLAGFCSKFYLFFAALGCGAY LA +GVVTSVI C+ R ++ F PK Sbjct: 314 IGHVGYLLIGFSCGTIEGIQSLLIGIFIYVLMTVNVFAIVLALRQNRFKYIADLGALAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYLLALIGVVTSVISCFYYIRFVKIMYFDTPK 443
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_AZOC5 (NADH-quinone oxidoreductase subunit N OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=nuoN PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.842e-22 Identity = 55/131 (41.98%), Postives = 81/131 (61.83%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQT--RVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGP 389 IGH + G GT +G+ +L+ + IY +MT+ +F VLA+R+ V+ I L LA+T P+ A+ + MFS AGIPPLAGF +K+Y+F AA+ G Y LA +GVV SV+G + R+ ++ F P Sbjct: 302 IGHMGFALVGLAAGTEQGVTGVLLYMAIYVVMTLGSFTCVLAMRRDGRSVETIEDLAGLARTKPLMALALAALMFSLAGIPPLAGFVAKYYVFLAAIQAGLYGLAVIGVVASVVGAYYYLRVVKIMYFDEP 432
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_MAGSA (NADH-quinone oxidoreductase subunit N OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=nuoN PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 4.388e-21 Identity = 55/138 (39.86%), Postives = 82/138 (59.42%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQT--RVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGPKAVLRAP 410 IGH ++ G G+ GI +LI + IY M + AFA++L++RQ V+ I L L+KT+P+ A ++ MFS AG+PPLAGF KFY+F AA+ G Y L+ +GV++SV+ + R+ +V F P P Sbjct: 308 IGHVGFVLVGIAAGSTLGIQGVLIYLAIYLFMNVGAFAVILSMRQKGRMVEGIDDLAGLSKTHPMMAFVMAVLMFSMAGVPPLAGFWGKFYVFMAAIESGLYTLSILGVLSSVVSTYYYLRIVKVMYFDEPVEAFDKP 445
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON1_RHIME (NADH-quinone oxidoreductase subunit N 1 OS=Rhizobium meliloti GN=nuoN1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.178e-20 Identity = 51/133 (38.35%), Postives = 82/133 (61.65%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQTRVKYIAGLGPLA---KTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGPK 392 IGH Y G G++ G+ +++ + IY +MT+ FA +LA+R+ +++ G+ LA +TNP A ++ MFS AGIPPLAGF +K+++F AA+ Y LA +GV+ SV+G + R+ +V F P+ Sbjct: 305 IGHMGYALVGLAAGSMAGVRGVILYMLIYMVMTLGTFACILAMRRREGEHVEGIDDLAGLSQTNPFMATVLTILMFSLAGIPPLAGFFAKYFVFVAAIEAQLYGLAIIGVLASVVGAYYYLRVIKVMWFEEPR 437
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_METNO (NADH-quinone oxidoreductase subunit N OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=nuoN PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.715e-20 Identity = 54/133 (40.60%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQTRVKY--IAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGPKA 395 IG+ Y G GT EG+ +++ + IY MT+ AFA++L +R+ + I L L++T+P A ++ MFS AGIPPLAGF +KFY+F AA+ G LA +GVVTSV+G + R+ ++ F +A Sbjct: 308 IGNVGYALIGLAAGTEEGVRGVVVYMAIYLAMTLGAFAVILGMRRGNRMFETIEDLSGLSRTHPWLAFCLAMMMFSLAGIPPLAGFFAKFYVFAAAIKAGLNVLAVIGVVTSVVGAYYYVRIVKIMYFDDAQA 440
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_RHORT (NADH-quinone oxidoreductase subunit N OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=nuoN PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.081e-19 Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQT--RVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQF 380 IGH Y G GT EG+ +L+ + IY M + F ++LA+RQ V+ I L L+K +P+ A ++ MFS AG+PPLAGF KFY+F AA+ G + LA +GV++SV+ + R+ ++ F Sbjct: 307 IGHVGYALIGIAAGTTEGVRGVLVYLAIYLFMNVGTFTVILAMRQKGRAVEGINDLAGLSKQHPMMAAAMAVFMFSMAGVPPLAGFFGKFYVFMAAVNSGLFALAVIGVLSSVVAAFYYLRIIKLMYF 434
BLAST of DY260235 vs. ExPASy Swiss-Prot
Match: NUON_GLUDA (NADH-quinone oxidoreductase subunit N OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=nuoN PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 7.006e-19 Identity = 56/135 (41.48%), Postives = 78/135 (57.78%), Query Frame = 3 Query: 3 IGHACYIPTGFPCGTIEGIPSLLIGIFIYALMTIDAFAIVLALRQT--RVKYIAGLGPLAKTNPISAITFSLTMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLASVGVVTSVIGCWAAGRLPRVSQFGGPKAVL 401 IGH Y G GT EG+ L+ + Y LM + AFA+++A+R+ V IA L L KT+P A ++ MFS AG PPLAGF K +F+AA+ + LA++GVV+SVIG + R+ +V F A L Sbjct: 300 IGHMGYALMGLCAGTAEGMRGTLVYLTTYLLMNVGAFAVIIAMRRKGREVTGIADLAGLGKTDPGLATAMAIFMFSMAGAPPLAGFFGKMMVFYAAINAHLFGLAAIGVVSSVIGGYYYVRIVKVMFFDDAAAPL 434 The following BLAST results are available for this feature:
BLAST of DY260235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260235 ID=DY260235; Name=DY260235; organism=Citrus clementina; type=EST; length=1038bpback to top |