DY260292

Overview
NameDY260292
Unique NameDY260292
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1116
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 1.802e-70
Identity = 121/133 (90.98%), Postives = 127/133 (95.49%), Query Frame = 3
Query:  174 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            M+T+GQVITCKAAVA+EPNK LVIEDVQVAPPQAGEVRIKIL+TALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ GDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG G+ MNDR+S F
Sbjct:    1 MATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRF 133          

HSP 2 Score: 30.0314 bits (66), Expect = 1.802e-70
Identity = 16/41 (39.02%), Postives = 25/41 (60.98%), Query Frame = 1
Query:  562 RALFSKNGTPIHPFLGTSTSTPHPPLCRTSLSTNKDPPTPL 684
            ++ FS NG PI+ F+GTST + +  +   S++   DP  PL
Sbjct:  130 KSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVA-KIDPTAPL 169          
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 6.798e-70
Identity = 121/134 (90.30%), Postives = 125/134 (93.28%), Query Frame = 3
Query:  171 AMSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            A ST+GQVITCKAAVAWE NK + IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG GV MNDR+S F
Sbjct:    2 ASSTQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRF 135          

HSP 2 Score: 27.7202 bits (60), Expect = 6.798e-70
Identity = 15/41 (36.59%), Postives = 25/41 (60.98%), Query Frame = 1
Query:  562 RALFSKNGTPIHPFLGTSTSTPHPPLCRTSLSTNKDPPTPL 684
            ++ FS NG PI+ F+GTST + +  +   S++   +P  PL
Sbjct:  132 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA-KINPQAPL 171          
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 1.508e-69
Identity = 120/134 (89.55%), Postives = 125/134 (93.28%), Query Frame = 3
Query:  171 AMSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            A ST+GQVITCKAAVAWE N+ + IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG GV MNDR+S F
Sbjct:    2 ASSTQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRF 135          

HSP 2 Score: 27.7202 bits (60), Expect = 1.508e-69
Identity = 15/41 (36.59%), Postives = 25/41 (60.98%), Query Frame = 1
Query:  562 RALFSKNGTPIHPFLGTSTSTPHPPLCRTSLSTNKDPPTPL 684
            ++ FS NG PI+ F+GTST + +  +   S++   +P  PL
Sbjct:  132 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA-KINPQAPL 171          
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 1.261e-68
Identity = 119/134 (88.81%), Postives = 125/134 (93.28%), Query Frame = 3
Query:  171 AMSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            A  T+GQVITCKAAVA+EPNK LVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGHEAAGIVESVGEGVT+VQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG GV MND +S F
Sbjct:    2 ASPTQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDMKSRF 135          

HSP 2 Score: 28.1054 bits (61), Expect = 1.261e-68
Identity = 15/41 (36.59%), Postives = 25/41 (60.98%), Query Frame = 1
Query:  562 RALFSKNGTPIHPFLGTSTSTPHPPLCRTSLSTNKDPPTPL 684
            ++ FS NG PI+ F+GTST + +  +   S++   +P  PL
Sbjct:  132 KSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVA-KINPQAPL 171          
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 2.117e-62
Identity = 113/135 (83.70%), Postives = 120/135 (88.89%), Query Frame = 3
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPFLQK 581
            +T+GQVITCKAAVAWEPNK L IEDV+VAPPQA EVRI+ILFTALCHTDAYT  GKDPEGLFPCILGHEAAGIVESVGEGVT+V+PGDHVIP YQAEC ECKFCKS KTNLCGKVR ATG GV M DR+S F  K
Sbjct:    1 ATQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGLFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATGVGVMMADRKSRFSVK 135          

HSP 2 Score: 25.0238 bits (53), Expect = 2.117e-62
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1
Query:  562 RALFSKNGTPIHPFLGTST 618
            ++ FS  G PI+ F+GTST
Sbjct:  129 KSRFSVKGKPIYHFMGTST 147          
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 7.241e-49
Identity = 93/133 (69.92%), Postives = 104/133 (78.20%), Query Frame = 3
Query:  174 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            MSTEG+VITCKAAVAWE  K LVIED++V PPQ GEVRIKIL+T +CHTD+YT SG DPEG+FPCILGHE  GIVES+GEGVT V+ GDHVIP Y  EC  CKFC S KTNLC K+R   G G QM D  + F
Sbjct:    1 MSTEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPEGIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQGKG-QMPDGTTRF 132          
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 8.851e-47
Identity = 89/123 (72.36%), Postives = 100/123 (81.30%), Query Frame = 3
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 545
            +TEG+VITCKAAVAWE  K LVIED++VAPP+A EVRIKI  T +CHTDA+T SG DPEGLFP +LGHE AGIVESVGEGVT  + GDHVI  Y  +C ECKFCKSGKTNLC K+R   GAGV
Sbjct:    3 ATEGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGV 125          
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 3.642e-46
Identity = 80/132 (60.61%), Postives = 100/132 (75.76%), Query Frame = 3
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            +T GQVI CKAAVAWE  K LVIE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT+++PGDHV+P +  EC++C+ CKS ++N+C  +R  T  GV ++D Q+ F
Sbjct:    4 NTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVMIHDGQTRF 135          

HSP 2 Score: 35.039 bits (79), Expect = 3.642e-46
Identity = 17/38 (44.74%), Postives = 24/38 (63.16%), Query Frame = 1
Query:  571 FSKNGTPIHPFLGTSTSTPHPPLCRTSLSTNKDPPTPL 684
            FSK+G PI+ F+GTST + +  +C +   T  DP  PL
Sbjct:  135 FSKDGKPIYHFVGTSTFSEY-TVCHSGCVTKIDPQAPL 171          
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.847e-45
Identity = 93/135 (68.89%), Postives = 100/135 (74.07%), Query Frame = 3
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPFLQK 581
            ST G+ ITCKAAVAWE  K L IEDV VAPP+  EVRIK+  T +CHTDAYT SG DPEG FP ILGHE AGIVES+GEGVT V+ GDHVI  Y  EC ECKFCKSGKTNLCGK+R   G GV M D  S F  K
Sbjct:    4 STVGKPITCKAAVAWEAAKPLSIEDVTVAPPKRHEVRIKLYDTGVCHTDAYTLSGVDPEGAFPVILGHEGAGIVESIGEGVTNVKVGDHVIALYTPECGECKFCKSGKTNLCGKIRATQGKGV-MPDGTSRFTCK 137          
BLAST of DY260292 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 4.857e-45
Identity = 87/133 (65.41%), Postives = 103/133 (77.44%), Query Frame = 3
Query:  174 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVQMNDRQSPF 572
            MS EG+ ITCKAAVAW   + L IED+QVAPP+A EVR+K+ ++A+CHTDAYT SG DPEG FP +LGHE AGIVES+GEGV  V+PGDHVI  Y  EC+ECKFC+SGKTNLC K+R   G G+ M D  S F
Sbjct:    1 MSFEGKTITCKAAVAWGAKEPLSIEDIQVAPPKAHEVRVKVDWSAVCHTDAYTLSGVDPEGAFPIVLGHEGAGIVESIGEGVINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQGRGL-MPDGTSRF 132          
The following BLAST results are available for this feature:
BLAST of DY260292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
ADHX_ARATH1.802e-7090.98Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_ORYSI6.798e-7090.30Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSJ1.508e-6989.55Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_MAIZE1.261e-6888.81Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_PEA2.117e-6283.70Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_DICDI7.241e-4969.92Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADHX_DROME8.851e-4772.36Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADH1_PETHY3.642e-4660.61Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
FADH_CANMA2.847e-4568.89S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
FADH1_SCHPO4.857e-4565.41Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YA21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260292 ID=DY260292; Name=DY260292; organism=Citrus clementina; type=EST; length=1116bp
GGTGTGTTTGGTAGAATCAATAATAGAGGGAGCTACTTTAGAAAAATCTC
ACATCTGTTGCCGGCAGCCACTCTCAGACCGTGTCACGTCCCTTTTTAAT
AATAATATCTATCTGCATCTACTCGTTTCTTTTTGTGGTCTGTTTTTCAT
TCTCATTTTCATTGTCAGCAGCCATGTCTACTGAAGGTCAAGTCATCACA
TGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTGGTGATTGAGGA
TGTGCAGGTTGCTCCGCCTCAGGCTGGCGAGGTCCGAATCAAGATTCTCT
TCACTGCTCTCTGCCACACTGATGCTTACACCTGGAGCGGCAAGGATCCT
GAAGGTCTCTTCCCTTGTATCCTAGGTCATGAGGCTGCTGGGATTGTGGA
GAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGATCATGTCATCC
CTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCAAGTCCGGAAAG
ACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGCGCCGGTGTCCAGAT
GAATGACCGCCAGAGCCCTTTTCTCCAAAAATGGGACACCCATCCATCCC
TTCCTGGGAACCTCAACCTCTACCCCCCACCCCCCCCTTTGCAGGACGTC
ACTGTCCACAAACAAAGACCCACCCACGCCCCTTCGAACAAAATAAGCCC
TCCCTTCCTGCAGGCGGCCCCACCCCTCTCATGAAGACACCGCGAACACC
CAACAAAAACAAACACCCGGACCCAACAACTCCGCAACAATATGCCCCAA
GGAACCGCTCCCCCCGATTCCAGGGCGCACACGGTCCCTAACAGACGATC
CTACACCCCCCACCCGATAATACGGCCAATCCTACCAGTCACCCCACAAT
CCCCTCTCGCCCGCACACCTCACAGCACCTCTCACCCACCCTACCACCCC
TCCTCACATCGCCCCCCAACACAGATACTACCCACCTCTCTCCCACACAG
TCCTGCCTACTGGCCCCACACCCCCAGAACCGCCCCCAGCGACCACCCAT
CTCACCTCTGGCGAACATACACCCCCTCACCCTTCACGTAAACTCACCCC
AACTCTATCCCAACCC
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