DY260319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 435.261 bits (1118), Expect = 3.250e-126 Identity = 222/248 (89.52%), Postives = 229/248 (92.34%), Query Frame = 2 Query: 20 LGQGTPGGLNXXXXXXXXXXXXADKKDKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVANS 763 +GQG GGLN DKK+KKFEPAAPPARVGRKQRKQKGPEAAARLPTVTP +KCKLRLLKLERIKDYLLMEEEFV NQERLKPQEEKAEEDRSKVDDLRG+PMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGC+ILMHNKVLSVVG+LQDEVDPMVSVMKVEKAPLESYADIGGL+AQIQEIKE VELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL KAVANS Sbjct: 1 MGQGPSGGLNRQGDRKPDG---GDKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANS 245 HSP 2 Score: 39.6614 bits (91), Expect = 3.250e-126 Identity = 16/25 (64.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +I +LGDGPKL+RE F+VADD P Sbjct: 258 LIQKYLGDGPKLVRELFRVADDLSP 282
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 433.721 bits (1114), Expect = 9.423e-126 Identity = 221/248 (89.11%), Postives = 229/248 (92.34%), Query Frame = 2 Query: 20 LGQGTPGGLNXXXXXXXXXXXXADKKDKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVANS 763 +GQG GGLN +KK+KKFEPAAPPARVGRKQRKQKGPEAAARLPTVTP +KCKLRLLKLERIKDYLLMEEEFV NQERLKPQEEKAEEDRSKVDDLRG+PMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGC+ILMHNKVLSVVG+LQDEVDPMVSVMKVEKAPLESYADIGGL+AQIQEIKE VELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL KAVANS Sbjct: 1 MGQGPSGGLNRQGDRKPDG---GEKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANS 245 HSP 2 Score: 39.6614 bits (91), Expect = 9.423e-126 Identity = 16/25 (64.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +I +LGDGPKL+RE F+VADD P Sbjct: 258 LIQKYLGDGPKLVRELFRVADDLSP 282
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2) HSP 1 Score: 415.616 bits (1067), Expect = 7.386e-120 Identity = 209/250 (83.60%), Postives = 224/250 (89.60%), Query Frame = 2 Query: 20 LGQGTPGGLNXXXXXXXXXXXXAD--KKDKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVANS 763 +GQGTPGG+ D KKD+KFEP A P+RVGRKQRKQKGPEAAARLP V PLSKC+LRLLKLER+KDYLLMEEEFV QERL+P E+K EEDRSKVDDLRG+PMSVG+LEE+IDE+HAIVSSSVGPEYYVGILSFVDKDQLEPGC+ILMHNKVLSVVG+LQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKE VELPLTHPELYEDIGI+PPKGVILYGEPGTGKTLL KAVANS Sbjct: 1 MGQGTPGGMGKQGGAPGDRKPGGDGDKKDRKFEPPAAPSRVGRKQRKQKGPEAAARLPNVAPLSKCRLRLLKLERVKDYLLMEEEFVAAQERLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANS 250 HSP 2 Score: 38.1206 bits (87), Expect = 7.386e-120 Identity = 15/25 (60.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +I +LGDGPKL+RE F+VAD+ P Sbjct: 263 LIQKYLGDGPKLVRELFRVADELSP 287
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 345.895 bits (886), Expect = 1.335e-98 Identity = 167/222 (75.23%), Postives = 200/222 (90.09%), Query Frame = 2 Query: 95 KDKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 K KK+EP P RVG+K+R+ KGP+AA +LP VTP ++C+L+LLKLERIKDYL+ME+EF+ NQERLKPQ+EK EE+RSKVDDLRG+PMSVGNLEE+ID+NHAIVS+SVG E+YV ILSFVDKDQLEPGC++L+++KV +VVG+L D+ DPMV+VMK+EKAP E+YADIGGLD QIQEIKE VELPLTHPE YE++GIKPPKGVILYG PGTGKTLL KAVAN Sbjct: 20 KKKKYEPPIP-TRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240 HSP 2 Score: 36.965 bits (84), Expect = 1.335e-98 Identity = 14/25 (56.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +I +LGDGPKL+RE F+VA++ P Sbjct: 254 LIQKYLGDGPKLVRELFRVAEEHAP 278
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 1.600e-96 Identity = 164/222 (73.87%), Postives = 198/222 (89.19%), Query Frame = 2 Query: 95 KDKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 K KK+EP P RVG+K++K KGP+AA++LP VTP ++C+L+LLKLERIKDYLLMEEEF+ NQE++KP EEK EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKD LEPGC++L+++KV +V+G+L D+ DP+V+VMKVEKAP E+YADIGGLD QIQEIKE VELPLTHPE YE++GIKPPKGVILYG PGTGKTLL KAVAN Sbjct: 21 KKKKYEPPVP-TRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241 HSP 2 Score: 36.965 bits (84), Expect = 1.600e-96 Identity = 14/25 (56.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +I +LGDGPKL+RE F+VA++ P Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAP 279
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 1.600e-96 Identity = 164/222 (73.87%), Postives = 198/222 (89.19%), Query Frame = 2 Query: 95 KDKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 K KK+EP P RVG+K++K KGP+AA++LP VTP ++C+L+LLKLERIKDYLLMEEEF+ NQE++KP EEK EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKD LEPGC++L+++KV +V+G+L D+ DP+V+VMKVEKAP E+YADIGGLD QIQEIKE VELPLTHPE YE++GIKPPKGVILYG PGTGKTLL KAVAN Sbjct: 21 KKKKYEPPVP-TRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241 HSP 2 Score: 36.965 bits (84), Expect = 1.600e-96 Identity = 14/25 (56.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +I +LGDGPKL+RE F+VA++ P Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAP 279
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 1.600e-96 Identity = 164/222 (73.87%), Postives = 198/222 (89.19%), Query Frame = 2 Query: 95 KDKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 K KK+EP P RVG+K++K KGP+AA++LP VTP ++C+L+LLKLERIKDYLLMEEEF+ NQE++KP EEK EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKD LEPGC++L+++KV +V+G+L D+ DP+V+VMKVEKAP E+YADIGGLD QIQEIKE VELPLTHPE YE++GIKPPKGVILYG PGTGKTLL KAVAN Sbjct: 21 KKKKYEPPVP-TRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241 HSP 2 Score: 36.965 bits (84), Expect = 1.600e-96 Identity = 14/25 (56.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +I +LGDGPKL+RE F+VA++ P Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAP 279
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 335.109 bits (858), Expect = 2.981e-95 Identity = 162/222 (72.97%), Postives = 197/222 (88.74%), Query Frame = 2 Query: 95 KDKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 K KK+EP P RVG+K++K KGP+AA++ P VTP ++C+L+LLKLERIKDYLLMEEEF+ NQE++KP EEK EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKD LEPGC++L+++KV +V+G+L D+ DP+V+VMK+EKAP E+YADIGGLD QIQEIKE VELPLTHPE YE++GIKPPKGVILYG PGTGKTLL KAVAN Sbjct: 21 KKKKYEPPVP-TRVGKKKKKTKGPDAASKPPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241 HSP 2 Score: 36.5798 bits (83), Expect = 2.981e-95 Identity = 14/25 (56.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +I +LGDGPKL+RE F+VA++ P Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHGP 279
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 2.737e-93 Identity = 154/224 (68.75%), Postives = 199/224 (88.84%), Query Frame = 2 Query: 89 DKKDKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 +KK+KK A P+R+G+K++ KGP+AA++LP VTP ++C+L+LLK ERIKDYLLME+EF+ NQERLKPQEE+ EE+R+KVD+LRG+PM+VG+LEE+ID+ HAIVS++VG E+YV I+SFVDK+QLEPGC++L+++K +V+G+L D+ DPMVSVMK+EKAP E+YAD+GGLD QIQEIKE VELPLTHPE YE++GI+PPKGVILYG PGTGKTLL KAVAN Sbjct: 21 EKKEKKKYEAPIPSRIGKKKKGSKGPDAASKLPAVTPHARCRLKLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVAN 244 HSP 2 Score: 36.965 bits (84), Expect = 2.737e-93 Identity = 13/25 (52.00%), Postives = 21/25 (84.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +I +LGDGPK++RE F+VA+++ P Sbjct: 258 LIQKYLGDGPKMVRELFRVAEENAP 282
BLAST of DY260319 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 1.349e-92 Identity = 158/248 (63.71%), Postives = 203/248 (81.85%), Query Frame = 2 Query: 20 LGQGTPGGLNXXXXXXXXXXXXADKKDK-KFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEPVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLCKAVAN 760 +GQ G + KKDK K+EP P RK++ Q GP+A+A+LPTV P ++C+LRLLK++RI D+LLMEEE+V NQERLKPQ+E+ +E+R++VD++RG+PMSVG LEE+ID++HAIVS++ GPEYYV I+SFVDKD LEPGC++L+H+K +S+VGLL D+ DPM++VMK++KAP ESYADIGGL++QIQEIKE VELPLTHPELYE++GIKPPKGVILYG PGTGKTLL KAVAN Sbjct: 1 MGQAQSGNFSNFGDGANGDNKKDQKKDKPKYEPPVPTRTGRRKKKAQSGPDASAKLPTVIPTTRCRLRLLKMQRIHDHLLMEEEYVQNQERLKPQDERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAIVSTA-GPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 247 HSP 2 Score: 32.7278 bits (73), Expect = 1.349e-92 Identity = 11/25 (44.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 798 IISNFLGDGPKLIREFFQVADDSPP 872 +I +LGDGP+L+R+ F A++ P Sbjct: 261 LIQKYLGDGPRLVRQLFNAAEEHSP 285 The following BLAST results are available for this feature:
BLAST of DY260319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260319 ID=DY260319; Name=DY260319; organism=Citrus clementina; type=EST; length=1206bpback to top |