DY260324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260324 vs. ExPASy Swiss-Prot
Match: GLSN_MEDSA (Glutamate synthase [NADH], amyloplastic OS=Medicago sativa PE=1 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 1.127e-88 Identity = 144/193 (74.61%), Postives = 164/193 (84.97%), Query Frame = 1 Query: 1 RRVILMAEEGVKFVVNANVGIDPMYSLDQLREENDAIVLAVGSTKPRDLPVPGRDLSGIHFAMEFLHSNTKSLLDSNLEDDSYISAXXXXXXXXXXXXXXXXXXXXSIRHGCSSIVNLELLPQPPQTRAPGNPWPQWPRVFRVDYGHQEVAAKFGKDPRSYEVLTKRFIGDENGVVKGLEIVRVPWEKDTSGK 579 RRV LMAEEG+ FVVNAN+G+DP+YSL++LREENDAIVLAVG+TKPRDLPVPGR+LSG+HFAMEFLH+NTKSLLDSNL+D +YISA SIRHGC+++VNLELLPQPP TRAPGNPWPQWPR+FRVDYGHQE KFGKDPR+YEVLTKRF+GDENGVVKGLE+VRV WEKD +GK Sbjct: 1880 RRVNLMAEEGINFVVNANIGLDPLYSLERLREENDAIVLAVGATKPRDLPVPGRELSGVHFAMEFLHANTKSLLDSNLQDGNYISAKGKKVVVIGGGDTGTDCIGTSIRHGCTAVVNLELLPQPPPTRAPGNPWPQWPRIFRVDYGHQEAETKFGKDPRTYEVLTKRFVGDENGVVKGLEVVRVCWEKDETGK 2072 HSP 2 Score: 41.9726 bits (97), Expect = 1.127e-88 Identity = 20/46 (43.48%), Postives = 30/46 (65.22%), Query Frame = 3 Query: 582 FHSQRLKALRK*LGADLVLPAMGFPGPESNVAKKFGPHPNNRSKFQ 719 F + ++ + + ADLVL AMGF GPE+ +A+K G +NRS F+ Sbjct: 2073 FQFKEIEGSEEIIEADLVLLAMGFLGPEATIAEKLGVERDNRSNFK 2118
BLAST of DY260324 vs. ExPASy Swiss-Prot
Match: GLT1_SCHPO (Putative glutamate synthase [NADPH] OS=Schizosaccharomyces pombe GN=SPAPB1E7.07 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 1.991e-54 Identity = 105/193 (54.40%), Postives = 130/193 (67.36%), Query Frame = 1 Query: 1 RRVILMAEEGVKFVVNANVGIDPMYSLDQLREENDAIVLAVGSTKPRDLPVPGRDLSGIHFAMEFLHSNTKSLLDSNLEDDSYISAXXXXXXXXXXXXXXXXXXXXSIRHGCSSIVNLELLPQPPQTRAPGNPWPQWPRVFRVDYGHQEVAAKFGKDPRSYEVLTKRFIGDENGVVKGLEIVRVPWEKDTSGK 579 RR+ LM +EG++ + N VG + SLD+L + DA+VLA GST PRDLP+P RD GIHFAMEFLH NTKSLLDS L+D +YISA S+RHG S+ NLELLP PP+ RA NPWPQ+PRVFRVDYGH EV A +G+D R Y +LTK F DE+G VKG+ VR+ W K++ G+ Sbjct: 1810 RRIQLMIDEGIEVLTNVEVGKNGDVSLDELHKVYDAVVLASGSTVPRDLPIPNRDSKGIHFAMEFLHKNTKSLLDSELKDGNYISAKGKDVIVIGGGDTGNDCLGTSVRHGAKSVRNLELLPIPPRERAFDNPWPQYPRVFRVDYGHAEVQAHYGQDFREYSILTKSFEKDEDGNVKGINTVRIEWTKNSKGR 2002 HSP 2 Score: 23.8682 bits (50), Expect = 1.991e-54 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 624 ADLVLPAMGFPGPE 665 ADLV+ A+GF GPE Sbjct: 2017 ADLVILALGFLGPE 2030
BLAST of DY260324 vs. ExPASy Swiss-Prot
Match: GLT1_YEAST (Glutamate synthase [NADH] OS=Saccharomyces cerevisiae GN=GLT1 PE=1 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 5.432e-45 Identity = 89/192 (46.35%), Postives = 121/192 (63.02%), Query Frame = 1 Query: 1 RRVILMAEEGVKFVVNANVGIDPMYSLDQLREENDAIVLAVGSTKPRDLPVPGRDLSGIHFAMEFLHSNTKSLLDSNLEDDSYISAXXXXXXXXXXXXXXXXXXXXSIRHGCSSIVNLELLPQPPQTRAPGNPWPQWPRVFRVDYGHQEVAAKFGKDPRSYEVLTKRFIGDENGVVKGLEIVRVPWEKDTSG 576 RR+ L++ EG+ FV N +G S+D+L+ +++A+V A+GST PRDLP+ GR+L I FAM+ L SNTK+LL+ +LE S+RHG +S++N ELLP+PP RA NPWPQWPRV RVDYGH EV +G+DPR Y +L+K FIG++ G V + VRV W+K SG Sbjct: 1837 RRIDLLSAEGIDFVTNTEIG--KTISMDELKNKHNAVVYAIGSTIPRDLPIKGRELKNIDFAMQLLESNTKALLNKDLEIIRE-KIQGKKVIVVGGGDTGNDCLGTSVRHGAASVLNFELLPEPPVERAKDNPWPQWPRVMRVDYGHAEVKEHYGRDPREYCILSKEFIGNDEGEVTAIRTVRVEWKKSQSG 2025 HSP 2 Score: 23.8682 bits (50), Expect = 5.432e-45 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 624 ADLVLPAMGFPGPE 665 AD++L +MGF GPE Sbjct: 2041 ADIILLSMGFVGPE 2054
BLAST of DY260324 vs. ExPASy Swiss-Prot
Match: GLTB_BACSU (Glutamate synthase [NADPH] small chain OS=Bacillus subtilis GN=gltB PE=2 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 3.476e-34 Identity = 69/193 (35.75%), Postives = 108/193 (55.96%), Query Frame = 1 Query: 1 RRVILMAEEGVKFVVNANVGIDPMYSLDQLREENDAIVLAVGSTKPRDLPVPGRDLSGIHFAMEFLHSNTKSLLDSNLEDDSYISAXXXXXXXXXXXXXXXXXXXXSIRHGCSSIVNLELLPQPPQTRAPGNPWPQWPRVFRVDYGHQEVAAKFGKDPRSYEVLTKRFIGDENGVVKGLEIVRVPWEKDTSGK 579 RR+ L+ +EG+ FV N +G+D + D+L+E+ DA++L G+ K RDL + GRD G+H+AM++L TKS LDSN +D +I A ++R S+ P+ P R N WP+ P VF ++Y ++E AKFG+DPR Y + T + + D+NG +K L +++ K+ GK Sbjct: 207 RRIKLLTQEGIDFVTNTEIGVD--ITADELKEQFDAVILCTGAQKQRDLLIEGRDSKGVHYAMDYLTLATKSYLDSNFKDKQFIDAKGKDVIVIGGGDTGADCVATALRQKAKSVHQFGKHPKLPPARTNDNMWPEQPHVFTLEYAYEEAEAKFGRDPREYSIQTTKMVADKNGKLKELHTIQMEKVKNEHGK 397 HSP 2 Score: 25.0238 bits (53), Expect = 3.476e-34 Identity = 14/41 (34.15%), Postives = 20/41 (48.78%), Query Frame = 3 Query: 582 FHSQRLKALRK*LGADLVLPAMGFPGPESNVAKKFGPHPNN 704 + + L K A LV A+GF G E + K+FG + N Sbjct: 398 YEFRELPGTEKVWPAQLVFIAIGFEGTEQPLLKQFGVNSVN 438 The following BLAST results are available for this feature:
BLAST of DY260324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260324 ID=DY260324; Name=DY260324; organism=Citrus clementina; type=EST; length=1232bpback to top |