DY260379

Overview
NameDY260379
Unique NameDY260379
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1093
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10226 contig Ccv1_Contig10226:27..1120. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260379 vs. ExPASy Swiss-Prot
Match: CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.563e-48
Identity = 93/138 (67.39%), Postives = 116/138 (84.06%), Query Frame = 1
Query:   94 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 507
            EE++K+F+QFD+N DGKIS+ EL  V K+MG+SY E EL RV+E++DTD+DG+I+L EF T+CR+SS AA   E+R+AFDLYDQDKNGLISA EL+ VLNRLG+ CSV+ C  MI PVDADGDGNVNFEEF+ MMT+S
Sbjct:   22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFSTLCRSSSSAA---EIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDADGDGNVNFEEFQKMMTSS 156          
BLAST of DY260379 vs. ExPASy Swiss-Prot
Match: CML26_ARATH (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana GN=CML26 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.052e-44
Identity = 92/154 (59.74%), Postives = 118/154 (76.62%), Query Frame = 1
Query:   46 ATTEADSNRKQLIVSRE-EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 504
            A T  +S  K    S + E++K+F++FDAN DGKIS++EL  V KSMG+SY EEEL RV++++D D DGFI+  EF TICR+SS A    E+REAFDLYDQ+KNGLIS+ E++ VLNRLG+ CSV+ CV MI  VD DGDGNVNFEEF+ MM++
Sbjct:    2 ANTNLESTNKSTTPSTDMELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFATICRSSSSAV---EIREAFDLYDQNKNGLISSSEIHKVLNRLGMTCSVEDCVRMIGHVDTDGDGNVNFEEFQKMMSS 152          
BLAST of DY260379 vs. ExPASy Swiss-Prot
Match: ALL8_OLEEU (Calcium-binding allergen Ole e 8 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 8.626e-39
Identity = 83/158 (52.53%), Postives = 112/158 (70.89%), Query Frame = 1
Query:   40 MAATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSS----GAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 501
            MAA T+ +S     +    E+Q +FN+FDAN DGKIS  ELA VLK++GS+  +EE+ R+ME++DTDKDGFI++ EF    +  +     + GE EL+EAF+LYDQD NGLIS+ EL+ +L RLG + +   CV MIK VD+DGDG V+FEEF+ MMT
Sbjct:    1 MAANTDRNSKPSVYLQEPNEVQGVFNRFDANGDGKISGDELAGVLKALGSNTSKEEIGRIMEEIDTDKDGFINVQEFAAFVKAETDPYPSSGGENELKEAFELYDQDHNGLISSVELHKILTRLGERYAEHDCVEMIKSVDSDGDGYVSFEEFKKMMT 158          
BLAST of DY260379 vs. ExPASy Swiss-Prot
Match: CML18_ORYSJ (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica GN=CML18 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.576e-32
Identity = 74/147 (50.34%), Postives = 100/147 (68.03%), Query Frame = 1
Query:   97 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSG------------AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 498
            E++++F ++DAN DGKIS  ELA+VL+++G+     E+ R+M+++D+D+DGF+ LSEF    C  +              AA EAELREAF +YD D NG ISA EL+ VL +LG KCSV  C  MI+ VDADGDG VNF+EF+ MM
Sbjct:    5 ELEQVFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEFAAFHCGPTPAHGGKGGDAKDQEAASEAELREAFRMYDADSNGKISARELHRVLRQLGDKCSVADCSRMIRSVDADGDGCVNFDEFKKMM 151          
BLAST of DY260379 vs. ExPASy Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 9.560e-30
Identity = 65/140 (46.43%), Postives = 94/140 (67.14%), Query Frame = 1
Query:   88 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEA---ELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 498
            S E+++K+F +FD N DGKIS+ EL  V+ ++  +  +EE   +M++ D D +GFI L EF  + + S  ++  +   +L+EAFDLYD D+NG ISA EL+ V+  LG KCS+  C  MI  VD+DGDG V+FEEF+ MM
Sbjct:   12 SMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQRMINKVDSDGDGCVDFEEFKKMM 151          
BLAST of DY260379 vs. ExPASy Swiss-Prot
Match: CML10_ORYSJ (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica GN=CML10 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 9.560e-30
Identity = 69/137 (50.36%), Postives = 95/137 (69.34%), Query Frame = 1
Query:   94 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSG--AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 498
            EEM+++F +FDAN DG+IS +EL  + +S+G +  ++EL R+M + D D DGFISL EF  +  T+SG  AA E +LR AF ++D D NG ISA EL  VL+ LG K +V  C  MI+ VD +GDG ++FEEF+ MM
Sbjct:   39 EEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLGEKATVQQCRRMIEGVDQNGDGLISFEEFKVMM 175          
BLAST of DY260379 vs. ExPASy Swiss-Prot
Match: CML24_ARATH (Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.631e-29
Identity = 66/143 (46.15%), Postives = 93/143 (65.03%), Query Frame = 1
Query:   88 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGE-----AELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 501
            S ++++K+F +FD N DGKIS+ EL  V++++  +   EE V +M+  D D +GFI L EF  + +   G  G      ++L+EAF+LYD D NG ISA+EL+ V+  LG KCSV  C  MI  VD DGDG VNF+EF+ MM+
Sbjct:   14 SMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQDCKKMISKVDIDGDGCVNFDEFKKMMS 156          
BLAST of DY260379 vs. ExPASy Swiss-Prot
Match: CML16_ORYSJ (Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica GN=CML16 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 4.441e-27
Identity = 72/165 (43.64%), Postives = 98/165 (59.39%), Query Frame = 1
Query:   40 MAATTEADSNRKQ-------LIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEE----ELVRVMEDLDTDKDGFISLSEFETICRTSSG-AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 498
            M+ TTE    ++Q       L  +  E++++F +FDA+ DG+IS +ELA V +++     E     E+  +M +LDTD+DGF+ L EF        G A  EAELR AFD+YD D +G I+A EL  VL R+G  CS + C  MI  VD DGDG V FEEF+ MM
Sbjct:    1 MSNTTEKKMPQQQQVERPTALAPADAEIERVFTRFDADGDGRISPSELAAVTRAIAPPPSESAGGREVAAMMNELDTDRDGFVDLGEFAAFHGRGRGDAEHEAELRAAFDVYDVDGDGRITAAELGKVLGRIGEGCSAEECERMIASVDVDGDGCVGFEEFKKMM 165          
BLAST of DY260379 vs. ExPASy Swiss-Prot
Match: CML15_ORYSJ (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica GN=CML15 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 7.575e-27
Identity = 62/139 (44.60%), Postives = 91/139 (65.47%), Query Frame = 1
Query:   88 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSG--AAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 498
            + +E +++F +FDAN DG+IS  ELA + +S+G +  ++E+ R+M++ D+D DG+ISL EF  I     G  AA E +LR AF ++D D NG+I+  EL  VL  +G   +V  C  MI  VD +GDG +NFEEF+ MM
Sbjct:   52 AEDETERVFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGYISLGEFAAISAPPPGDAAAAEEDLRHAFGVFDADGNGVITPAELARVLRGIGEAATVAQCRRMIDGVDRNGDGLINFEEFKLMM 190          
BLAST of DY260379 vs. ExPASy Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.182e-25
Identity = 61/136 (44.85%), Postives = 84/136 (61.76%), Query Frame = 1
Query:   97 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE-LREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 501
            E++ +F +FD N DGKIS  EL  ++ S+G    EEEL + + ++D   DG+I+  EF  +           E L++AF +YD D NG ISAEEL+ VL  LG +CS+  C  MI  VD DGDG ++FEEF+ MMT
Sbjct:   37 ELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVDKDGDGTIDFEEFKIMMT 172          
The following BLAST results are available for this feature:
BLAST of DY260379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
CML27_ARATH4.563e-4867.39Probable calcium-binding protein CML27 OS=Arabidop... [more]
CML26_ARATH1.052e-4459.74Probable calcium-binding protein CML26 OS=Arabidop... [more]
ALL8_OLEEU8.626e-3952.53Calcium-binding allergen Ole e 8 OS=Olea europaea ... [more]
CML18_ORYSJ1.576e-3250.34Probable calcium-binding protein CML18 OS=Oryza sa... [more]
CML23_ARATH9.560e-3046.43Probable calcium-binding protein CML23 OS=Arabidop... [more]
CML10_ORYSJ9.560e-3050.36Probable calcium-binding protein CML10 OS=Oryza sa... [more]
CML24_ARATH1.631e-2946.15Calcium-binding protein CML24 OS=Arabidopsis thali... [more]
CML16_ORYSJ4.441e-2743.64Probable calcium-binding protein CML16 OS=Oryza sa... [more]
CML15_ORYSJ7.575e-2744.60Probable calcium-binding protein CML15 OS=Oryza sa... [more]
CML25_ARATH3.182e-2544.85Probable calcium-binding protein CML25 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YE24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260379 ID=DY260379; Name=DY260379; organism=Citrus clementina; type=EST; length=1093bp
ATCTTTTCCCCCCTTTAGAACAAAAGAAAAAGAAAAGCAATGGCAGCAAC
AACGGAGGCAGATTCGAATAGGAAACAGCTAATAGTGAGCCGGGAGGAGA
TGCAGAAGATCTTCAACCAGTTCGACGCGAACAAGGACGGCAAGATCTCG
CTGACGGAGCTGGCGACCGTTTTGAAATCAATGGGATCGAGCTACAAAGA
GGAGGAGCTCGTCCGCGTCATGGAGGATCTCGATACCGACAAGGACGGAT
TCATCAGCCTGTCGGAGTTCGAAACGATCTGCCGGACCTCCTCTGGTGCC
GCCGGCGAGGCCGAGCTCCGCGAGGCGTTTGATCTCTACGATCAGGACAA
GAACGGCTTGATTTCGGCGGAGGAGTTGAATTTGGTGTTGAACAGGCTCG
GAATTAAGTGCTCGGTTGATGGATGTGTGGCGATGATTAAGCCGGTGGAT
GCCGATGGTGATGGCAATGTGAATTTTGAAGAGTTTCGTTCGATGATGAC
TACTTCTCTTAAACCTGGTCCTGCGCCGTAGATTTTGGTTTCGACCGTGA
TTCCATGGTCGGCCCTACCGATATTAACTTGCGTCCGTTTATAGGCCTGC
GCTCTCCCCCGTGCCCTCCTGCGCCCACAACCTTAAAGGCAATAAACTAT
GATGCATTTTCCATGCGCTTCACACCAACCCCTCAAAAACCACCCACGTT
CCCTACAACCTTCCCGCGTACTCCCCACCCTGCTGCCACCACTTAGACGC
ACAACCACTTCCCCACAAGAATCCCCCTCCTCCCCCTTCTCTCGCTCAAC
TCGAACCAACCCGAAAAAATCCTACCCCCCCGCCCCGCACACAGCCCGCC
AAACCTCCAGCAAACCCCCCTCTCACTTTACCTCACCCCTCTTCCTCGGA
TCTCCATCATCGCTCAATCCCTCCCCCACCTCCATAATAACAACACTTCT
TCTCTTCAACCCCACCCCCCACCCCCCACCCGCCACGGCCTGTGCCCTCG
TCCCTTCCCCTGCGCACCCCCGCTCCCTCTCCCGCCACCCTCCCACATCC
TCCACGCGCCGCCAATTACAATACCATCTCCCCACCATGCTCA
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